The mycobiome: interactions with host and implications in diseases

Candida albicans-specific Th17 cell-mediated response contributes to alcohol-associated liver disease

(2023) Suling Zeng et al.   Cell Host & Microbe

Fungal mycobiome drives IL-33 secretion and type 2 immunity in pancreatic cancer

(2022) Aftab Alam et al.   CANCER CELL

Mucosal fungi promote gut barrier function and social behavior via Type 17 immunity

(2022) Irina Leonardi et al.   CELL

Immune regulation by fungal strain diversity in inflammatory bowel disease

(2022) Xin V. Li et al.   NATURE

A longitudinal study of the pulmonary mycobiome in subjects with and without chronic obstructive pulmonary disease

(2022) Einar M. H. Martinsen et al.   PLoS One

Microbiota dynamics in a randomized trial of gut decontamination during allogeneic hematopoietic cell transplantation

(2022) Christopher J. Severyn et al.   JCI Insight

Altered Mycobiota Signatures and Enriched Pathogenic Aspergillus rambellii Are Associated With Colorectal Cancer Based on Multicohort Fecal Metagenomic Analyses

(2022) Yufeng Lin et al.   GASTROENTEROLOGY

Pan-cancer analyses reveal cancer-type-specific fungal ecologies and bacteriome interactions

(2022) Lian Narunsky-Haziza et al.   CELL

A pan-cancer mycobiome analysis reveals fungal involvement in gastrointestinal and lung tumors

(2022) Anders B. Dohlman et al.   CELL

The gut mycobiome in health, disease, and clinical applications in association with the gut bacterial microbiome assembly

(2022) Fen Zhang et al.   Lancet Microbe

Murine model of colonization with fungal pathogen Candida auris to explore skin tropism, host risk factors and therapeutic strategies

(2021) Xin Huang et al.   Cell Host & Microbe

Human gut mycobiota tune immunity via CARD9-dependent induction of anti-fungal IgG antibodies

(2021) Itai Doron et al.   CELL

Fungal‐induced glycolysis in macrophages promotes colon cancer by enhancing innate lymphoid cell secretion of IL‐22

(2021) Yanan Zhu et al.   EMBO JOURNAL

Multi-kingdom ecological drivers of microbiota assembly in preterm infants

(2021) Chitong Rao et al.   NATURE

Debaryomyces is enriched in Crohn’s disease intestinal tissue and impairs healing in mice

(2021) Umang Jain et al.   SCIENCE

Impact of gut fungal and bacterial communities on the outcome of allogeneic hematopoietic cell transplantation

(2021) Florent Malard et al.   Mucosal Immunology

Adaptive immunity induces mutualism between commensal eukaryotes

(2021) Kyla S. Ost et al.   NATURE

Integrated genomic, epidemiologic investigation of Candida auris skin colonization in a skilled nursing facility

(2021) Diana M. Proctor et al.   NATURE MEDICINE

Prognostic correlations with the microbiome of breast cancer subtypes

(2021) Sagarika Banerjee et al.   Cell Death & Disease

Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics

(2021) Patrick T. West et al.   Microbiome

Haematopoietic cell transplantation outcomes are linked to intestinal mycobiota dynamics and an expansion of Candida parapsilosis complex species

(2021) Thierry Rolling et al.   Nature Microbiology

Integrating cultivation and metagenomics for a multi-kingdom view of skin microbiome diversity and functions

(2021) Sara Saheb Kashaf et al.   Nature Microbiology

Mycobiota-induced IgA antibodies regulate fungal commensalism in the gut and are dysregulated in Crohn’s disease

(2021) Itai Doron et al.   Nature Microbiology

Customization of a DADA2-based pipeline for fungal internal transcribed spacer 1 (ITS1) amplicon data sets

(2021) Thierry Rolling et al.   JCI Insight

The gut commensal fungus, Candida parapsilosis, promotes high fat-diet induced obesity in mice

(2021) Shanshan Sun et al.   Communications Biology

High-resolution mycobiota analysis reveals dynamic intestinal translocation preceding invasive candidiasis

(2020) Bing Zhai et al.   NATURE MEDICINE

Supragingival mycobiome and inter-kingdom interactions in dental caries

(2020) Divyashri Baraniya et al.   Journal of Oral Microbiology

Minority report: the intestinal mycobiota in systemic infections

(2020) Thierry Rolling et al.   CURRENT OPINION IN MICROBIOLOGY

The airway fungal microbiome in asthma

(2020) Eva‐Maria Rick et al.   CLINICAL AND EXPERIMENTAL ALLERGY

The Neutral Vaginal pH in Mice That Is Typical of Most Mammalian Species Should Not Deter Research Using Experimental Murine Models of Candida Vaginitis

(2020) Paul L. Fidel   INFECTION AND IMMUNITY

Genome-resolved metagenomics of eukaryotic populations during early colonization of premature infants and in hospital rooms

(2019) Matthew R. Olm et al.   Microbiome

Malassezia Is Associated with Crohn’s Disease and Exacerbates Colitis in Mouse Models

(2019) Jose J. Limon et al.   Cell Host & Microbe

The Skin Commensal Yeast Malassezia Triggers a Type 17 Response that Coordinates Anti-fungal Immunity and Exacerbates Skin Inflammation

(2019) Florian Sparber et al.   Cell Host & Microbe

Intestinal fungal dysbiosis and systemic immune response to fungi in patients with alcoholic hepatitis

(2019) Sonja Lang et al.   HEPATOLOGY

Salivary mycobiome dysbiosis and its potential impact on bacteriome shifts and host immunity in oral lichen planus

(2019) Yan Li et al.   International Journal of Oral Science

The Candida albicans exotoxin candidalysin promotes alcohol-associated liver disease

(2019) Huikuan Chu et al.   JOURNAL OF HEPATOLOGY

Intestinal Candida parapsilosis isolates from Rett syndrome subjects bear potential virulent traits and capacity to persist within the host

(2018) Francesco Strati et al.   BMC GASTROENTEROLOGY

CX3CR1+mononuclear phagocytes control immunity to intestinal fungi

(2018) Irina Leonardi et al.   SCIENCE

Investigating Colonization of the Healthy Adult Gastrointestinal Tract by Fungi

(2018) Thomas A. Auchtung et al.   mSphere

Development of the Human Mycobiome over the First Month of Life and across Body Sites

(2018) Tonya L. Ward et al.   mSystems

Enteric fungal microbiota dysbiosis and ecological alterations in colorectal cancer

(2018) Olabisi Oluwabukola Coker et al.   GUT

Evolution of drug resistance in an antifungal-naive chronic Candida lusitaniae infection

(2018) Elora G. Demers et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intestinal fungi contribute to development of alcoholic liver disease

(2017) An-Ming Yang et al.   JOURNAL OF CLINICAL INVESTIGATION

A dysbiotic mycobiome dominated by Candida albicans is identified within oral squamous-cell carcinomas

(2017) Manosha Perera et al.   Journal of Oral Microbiology

Early gut mycobiota and mother-offspring transfer

(2017) Kasper Schei et al.   Microbiome

The gut mycobiome of the Human Microbiome Project healthy cohort

(2017) Andrea K. Nash et al.   Microbiome

Fungal microbiota dysbiosis in IBD

(2016) Harry Sokol et al.   GUT

Altered gut microbiota in Rett syndrome

(2016) Francesco Strati et al.   Microbiome

Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn’s Disease

(2015) James D. Lewis et al.   Cell Host & Microbe

Fungal Signature in the Gut Microbiota of Pediatric Patients With Inflammatory Bowel Disease

(2015) Christel Chehoud et al.   INFLAMMATORY BOWEL DISEASES

Fungal Dysbiosis in Mucosa-associated Microbiota of Crohn’s Disease Patients

(2015) Giuseppina Liguori et al.   Journal of Crohns & Colitis

Mycobiome: Approaches to analysis of intestinal fungi

(2015) Jie Tang et al.   JOURNAL OF IMMUNOLOGICAL METHODS

Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation

(2015) Sang Hu Kim et al.   PLoS Pathogens

Biogeography and individuality shape function in the human skin metagenome

(2014) Julia Oh et al.   NATURE

Dysbiosis of Gut Fungal Microbiota is Associated With Mucosal Inflammation in Crohn’s Disease

(2013) Qiurong Li et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

Interactions Between Commensal Fungi and the C-Type Lectin Receptor Dectin-1 Influence Colitis

(2012) I. D. Iliev et al.   SCIENCE

Characterization of the Oral Fungal Microbiome (Mycobiome) in Healthy Individuals

(2010) Mahmoud A. Ghannoum et al.   PLoS Pathogens