Investigating Colonization of the Healthy Adult Gastrointestinal Tract by Fungi

Intestinal Fungal Dysbiosis Is Associated With Visceral Hypersensitivity in Patients With Irritable Bowel Syndrome and Rats

(2017) Sara Botschuijver et al.   GASTROENTEROLOGY

Is the oral fungal pathogen Candida albicans a cariogen?

(2017) DFA Pereira et al.   ORAL DISEASES

Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation

(2017) Koji Atarashi et al.   SCIENCE

The gut mycobiome of the Human Microbiome Project healthy cohort

(2017) Andrea K. Nash et al.   Microbiome

High-Fat Diet Changes Fungal Microbiomes and Interkingdom Relationships in the Murine Gut

(2017) Timothy Heisel et al.   mSphere

Unexplored Archaeal Diversity in the Great Ape Gut Microbiome

(2017) Kasie Raymann et al.   mSphere

Evaluating the Impact of DNA Extraction Method on the Representation of Human Oral Bacterial and Fungal Communities

(2017) Anna Vesty et al.   PLoS One

Immunological Consequences of Intestinal Fungal Dysbiosis

(2016) Matthew L. Wheeler et al.   Cell Host & Microbe

Antibiotics as deep modulators of gut microbiota: between good and evil

(2016) Gianluca Ianiro et al.   GUT

Fungal microbiota dysbiosis in IBD

(2016) Harry Sokol et al.   GUT

Culturing of ‘unculturable’ human microbiota reveals novel taxa and extensive sporulation

(2016) Hilary P. Browne et al.   NATURE

Current status of Blastocystis: A personal view

(2016) C. Rune Stensvold et al.   PARASITOLOGY INTERNATIONAL

Medical mycology and fungal immunology: new research perspectives addressing a major world health challenge

(2016) Neil A. R. Gow et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Clonal Strain Persistence of Candida albicans Isolates from Chronic Mucocutaneous Candidiasis Patients

(2016) Alexander J. Moorhouse et al.   PLoS One

Helminth infection promotes colonization resistance via type 2 immunity

(2016) Deepshika Ramanan et al.   SCIENCE

Bacteriome and Mycobiome Interactions Underscore Microbial Dysbiosis in Familial Crohn’s Disease

(2016) G. Hoarau et al.   mBio

Fungi in the healthy human gastrointestinal tract

(2016) Heather E. Hallen-Adams et al.   Virulence

Revised Estimates for the Number of Human and Bacteria Cells in the Body

(2016) Ron Sender et al.   PLOS BIOLOGY

Age and Gender Affect the Composition of Fungal Population of the Human Gastrointestinal Tract

(2016) Francesco Strati et al.   Frontiers in Microbiology

Candida albicansBiofilms and Human Disease

(2015) Clarissa J. Nobile et al.   Annual Review of Microbiology

Probiotic Saccharomyces cerevisiae strains as biotherapeutic tools: is there room for improvement?

(2015) Mariana L. Palma et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Distribution and impact of yeast thermal tolerance permissive for mammalian infection

(2015) Vincent Robert et al.   BMC BIOLOGY

MIG1 Regulates Resistance of Candida albicans against the Fungistatic Effect of Weak Organic Acids

(2015) Fabien Cottier et al.   EUKARYOTIC CELL

Fungi inhabiting the healthy human gastrointestinal tract: a diverse and dynamic community

(2015) Heather E. Hallen-Adams et al.   Fungal Ecology

Fungal Signature in the Gut Microbiota of Pediatric Patients With Inflammatory Bowel Disease

(2015) Christel Chehoud et al.   INFLAMMATORY BOWEL DISEASES

Activation of HIF-1α and LL-37 by commensal bacteria inhibits Candida albicans colonization

(2015) Di Fan et al.   NATURE MEDICINE

Cultivation of stable, reproducible microbial communities from different fecal donors using minibioreactor arrays (MBRAs)

(2015) Jennifer M. Auchtung et al.   Microbiome

Manipulation of Host Diet To Reduce Gastrointestinal Colonization by the Opportunistic Pathogen Candida albicans

(2015) Kearney T. W. Gunsalus et al.   mSphere

The microbiome of uncontacted Amerindians

(2015) J. C. Clemente et al.   Science Advances

Biogeography and individuality shape function in the human skin metagenome

(2014) Julia Oh et al.   NATURE

rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development

(2014) Steven F. Stoddard et al.   NUCLEIC ACIDS RESEARCH

Rapid changes in the gut microbiome during human evolution

(2014) Andrew H. Moeller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pathogenic Eukaryotes in Gut Microbiota of Western Lowland Gorillas as Revealed by Molecular Survey

(2014) Ibrahim Hamad et al.   Scientific Reports

Host lifestyle affects human microbiota on daily timescales

(2014) Lawrence A David et al.   GENOME BIOLOGY

Epidemiology and risk factors for invasive candidiasis

(2014) Nur Yapar   Therapeutics and Clinical Risk Management

Choice of bacterial DNA extraction method from fecal material influences community structure as evaluated by metagenomic analysis

(2014) Agata Wesolowska-Andersen et al.   Microbiome

Candida albicans Is Not Always the Preferential Yeast Colonizing Humans: A Study in Wayampi Amerindians

(2013) Cécile Angebault et al.   JOURNAL OF INFECTIOUS DISEASES

ITS1 versus ITS2 as DNA metabarcodes for fungi

(2013) R. Blaalid et al.   Molecular Ecology Resources

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents

(2013) Christian Hoffmann et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Fungi of the Murine Gut: Episodic Variation and Proliferation during Antibiotic Treatment

(2013) Serena Dollive et al.   PLoS One

The Human Microbiome Project strategy for comprehensive sampling of the human microbiome and why it matters

(2012) Kjersti Aagaard et al.   FASEB JOURNAL

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Interactions Between Commensal Fungi and the C-Type Lectin Receptor Dectin-1 Influence Colitis

(2012) I. D. Iliev et al.   SCIENCE

Hidden Killers: Human Fungal Infections

(2012) G. D. Brown et al.   Science Translational Medicine

Inflammation and gastrointestinal Candida colonization

(2011) Carol A Kumamoto   CURRENT OPINION IN MICROBIOLOGY

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Edible mushrooms: Role in the prevention of cardiovascular diseases

(2010) Eva Guillamón et al.   FITOTERAPIA

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Serious Overestimation in Quantitative PCR by Circular (Supercoiled) Plasmid Standard: Microalgal pcna as the Model Gene

(2010) Yubo Hou et al.   PLoS One

Mammalian Endothermy Optimally Restricts Fungi and Metabolic Costs

(2010) A. Bergman et al.   mBio

Characterization of the Oral Fungal Microbiome (Mycobiome) in Healthy Individuals

(2010) Mahmoud A. Ghannoum et al.   PLoS Pathogens

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Reproducible Community Dynamics of the Gastrointestinal Microbiota following Antibiotic Perturbation

(2009) D. A. Antonopoulos et al.   INFECTION AND IMMUNITY

Ecological Role of Lactobacilli in the Gastrointestinal Tract: Implications for Fundamental and Biomedical Research

(2008) J. Walter   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A history of research on yeasts 12: medical yeasts part 1,Candida albicans

(2008) James A. Barnett   YEAST