Structural conservation in the glutathione binding in Sphingomonas sp. glutaredoxin Grx3 and variations for cold adaptation

Tyr76 is essential for the cold adaptation of a class II glutaredoxin 4 with a heat‐labile structure from the Arctic bacterium Sphingomonas sp.

(2023) Trang Hoang et al.   FEBS Open Bio

Unraveling the roles of aromatic cluster side-chain interactions on the structural stability and functional significance of psychrophilic Sphingomonas sp. glutaredoxin 3

(2023) Trang Van Tran et al.   PLoS One

BeStSel: webserver for secondary structure and fold prediction for protein CD spectroscopy

(2022) András Micsonai et al.   NUCLEIC ACIDS RESEARCH

New insights on thioredoxins (Trxs) and glutaredoxins (Grxs) by in silico amino acid sequence, phylogenetic and comparative structural analyses in organisms of three domains of life

(2022) Soumila Mondal et al.   Heliyon

Highly accurate protein structure prediction with AlphaFold

(2021) John Jumper et al.   NATURE

Glutaredoxin: Discovery, redox defense and much more

(2021) Fernando T. Ogata et al.   Redox Biology

Essential roles of buried phenylalanine in the structural stability of thioredoxin from a psychrophilic Arctic bacterium Sphingomonas sp.

(2021) Thu-Thuy Nguyen et al.   PLoS One

The Role of Conformational Dynamics and Allostery in Modulating Protein Evolution

(2020) Paul Campitelli et al.   Annual Review of Biophysics

Scalable molecular dynamics on CPU and GPU architectures with NAMD

(2020) James C. Phillips et al.   JOURNAL OF CHEMICAL PHYSICS

Molecular basis for the distinct functions of redox-active and FeS-transfering glutaredoxins

(2020) Daniel Trnka et al.   Nature Communications

Protein folding stability and binding interactions through the lens of evolution: a dynamical perspective

(2020) Tushar Modi et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Modulation of thiol-dependent redox system by metal ions via thioredoxin and glutaredoxin systems

(2018) Yanfang Ouyang et al.   Metallomics

Ancient thioredoxins evolved to modern-day stability–function requirement by altering native state ensemble

(2018) Tushar Modi et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Structural insights into the binding of buckwheat glutaredoxin with GSH and regulation of its catalytic activity

(2017) Xinyu Zhang et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

Making sense of the past: hyperstability of ancestral thioredoxins explained by free energy simulations

(2017) Álvaro Cortés Cabrera et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Evidence for the principle of minimal frustration in the evolution of protein folding landscapes

(2017) Franco O. Tzul et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Glutaredoxin catalysis requires two distinct glutathione interaction sites

(2017) Patricia Begas et al.   Nature Communications

CHARMM36 all-atom additive protein force field: Validation based on comparison to NMR data

(2013) Jing Huang et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Conservation of Protein Structure over Four Billion Years

(2013) Alvaro Ingles-Prieto et al.   STRUCTURE

Glutaredoxins in Thiol/Disulfide Exchange

(2012) Christopher Horst Lillig et al.   ANTIOXIDANTS & REDOX SIGNALING

Genome Sequence of Sphingomonas sp. Strain PAMC 26621, an Arctic-Lichen-Associated Bacterium Isolated from a Cetraria sp.

(2012) H. Lee et al.   JOURNAL OF BACTERIOLOGY

Determinants of activity in glutaredoxins: anin vitroevolved Grx1-like variant ofEscherichia coliGrx3

(2010) Tobias H. Elgán et al.   BIOCHEMICAL JOURNAL

Evolution based on domain combinations: the case of glutaredoxins

(2009) Rui Alves et al.   BMC EVOLUTIONARY BIOLOGY

Evolution and diversity of glutaredoxins in photosynthetic organisms

(2009) Jérémy Couturier et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading

(2009) Oleg Trott et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Differential cold–adaptation among protein components of the thioredoxin system in the psychrophilic eubacterium Pseudoalteromonas haloplanktis TAC 125

(2009) Roberta Cotugno et al.   Molecular BioSystems

Glutaredoxins: roles in iron homeostasis

(2009) Nicolas Rouhier et al.   TRENDS IN BIOCHEMICAL SCIENCES

Two Novel Monothiol Glutaredoxins fromSaccharomyces cerevisiaeProvide Further Insight into Iron-Sulfur Cluster Binding, Oligomerization, and Enzymatic Activity of Glutaredoxins†

(2008) Nikola Mesecke et al.   BIOCHEMISTRY

QuantifyingEscherichia coliGlutaredoxin-3 Substrate Specificity Using Ligand-induced Stability

(2008) Tobias H. Elgán et al.   JOURNAL OF BIOLOGICAL CHEMISTRY