BeStSel: webserver for secondary structure and fold prediction for protein CD spectroscopy

Disordered–Ordered Protein Binary Classification by Circular Dichroism Spectroscopy

(2022) András Micsonai et al.   Frontiers in Molecular Biosciences

EGFR extracellular domain III expressed in Escherichia coli with SEP tag shows improved biophysical and functional properties and generate anti-sera inhibiting cancer cell growth

(2021) Subbaian Brindha et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

C subunit of the ATP synthase is an amyloidogenic calcium dependent channel-forming peptide with possible implications in mitochondrial permeability transition

(2021) Giuseppe Federico Amodeo et al.   Scientific Reports

Freeze thaw and lyophilization induced alteration in mAb therapeutics: Trastuzumab as a case study

(2021) Rozaleen Dash et al.   JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS

Highly accurate protein structure prediction with AlphaFold

(2021) John Jumper et al.   NATURE

Highly accurate protein structure prediction for the human proteome

(2021) Kathryn Tunyasuvunakool et al.   NATURE

Microbial production of megadalton titin yields fibers with advantageous mechanical properties

(2021) Christopher H. Bowen et al.   Nature Communications

Delivery of local anaesthetics by a self-assembled supramolecular system mimicking their interactions with a sodium channel

(2021) Tianjiao Ji et al.   Nature Biomedical Engineering

Anti-EGFR VHH Antibody under Thermal Stress Is Better Solubilized with a Lysine than with an Arginine SEP Tag

(2021) Md. Golam Kibria et al.   Biomolecules

Targeting ErbB3 Receptor in Cancer with Inhibitory Antibodies from Llama

(2021) Igor E. Eliseev et al.   Biomedicines

DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation

(2021) Federica Quaglia et al.   NUCLEIC ACIDS RESEARCH

Two-Component Nanoparticle Vaccine Displaying Glycosylated Spike S1 Domain Induces Neutralizing Antibody Response against SARS-CoV-2 Variants

(2021) Linda van Oosten et al.   mBio

Dissection of the amyloid formation pathway in AL amyloidosis

(2021) Pamina Kazman et al.   Nature Communications

Transition between protein-like and polymer-like dynamic behavior: Internal friction in unfolded apomyoglobin depends on denaturing conditions

(2020) Livia Balacescu et al.   Scientific Reports

Effect of metallic nanoparticles on amyloid fibrils and their influence to neural cell toxicity

(2020) Marianna Barbalinardo et al.   Nano Research

CATH: increased structural coverage of functional space

(2020) Ian Sillitoe et al.   NUCLEIC ACIDS RESEARCH

Heparin Inhibits Cellular Invasion by SARS-CoV-2: Structural Dependence of the Interaction of the Spike S1 Receptor-Binding Domain with Heparin

(2020) Courtney J. Mycroft-West et al.   THROMBOSIS AND HAEMOSTASIS

Interaction of silver nanoparticles with plasma transport proteins: A systematic study on impacts of particle size, shape and surface functionalization

(2020) Rinea Barbir et al.   CHEMICO-BIOLOGICAL INTERACTIONS

The Functional Mammalian CRES (Cystatin-Related Epididymal Spermatogenic) Amyloid is Antiparallel β-Sheet Rich and Forms a Metastable Oligomer During Assembly

(2019) Hoa Quynh Do et al.   Scientific Reports

Solution structure of human myeloid-derived growth factor suggests a conserved function in the endoplasmic reticulum

(2019) Valeriu Bortnov et al.   Nature Communications

Reducing protein oxidation reverses lung fibrosis

(2018) Vikas Anathy et al.   NATURE MEDICINE

BeStSel: a web server for accurate protein secondary structure prediction and fold recognition from the circular dichroism spectra

(2018) András Micsonai et al.   NUCLEIC ACIDS RESEARCH

Mycobacterium tuberculosis CarD, an essential global transcriptional regulator forms amyloid-like fibrils

(2018) Gundeep Kaur et al.   Scientific Reports

Design and characterization of a self-assembling protein nanoparticle displaying HIV-1 Env V1V2 loop in a native-like trimeric conformation as vaccine antigen

(2018) Christopher P. Karch et al.   Nanomedicine-Nanotechnology Biology and Medicine

Accurate secondary structure prediction and fold recognition for circular dichroism spectroscopy

(2015) András Micsonai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Supersaturation-limited Amyloid Fibrillation of Insulin Revealed by Ultrasonication

(2014) Hiroya Muta et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

CATH: comprehensive structural and functional annotations for genome sequences

(2014) Ian Sillitoe et al.   NUCLEIC ACIDS RESEARCH

CAPITO—a web server-based analysis and plotting tool for circular dichroism data

(2013) Christoph Wiedemann et al.   BIOINFORMATICS

Sequence-specific determination of protein and peptide concentrations by absorbance at 205 nm

(2013) Nicholas J. Anthis et al.   PROTEIN SCIENCE

Hereditary Systemic Amyloidosis Due to Asp76Asn Variant β2-Microglobulin

(2012) Sophie Valleix et al.   NEW ENGLAND JOURNAL OF MEDICINE

Prediction of protein secondary structure from circular dichroism using theoretically derived spectra

(2011) Caroline Louis-Jeune et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

2Struc: the secondary structure server

(2010) D. P. Klose et al.   BIOINFORMATICS

Evolutionary Origin of a Secondary Structure: π-Helices as Cryptic but Widespread Insertional Variations of α-Helices That Enhance Protein Functionality

(2010) Richard B. Cooley et al.   JOURNAL OF MOLECULAR BIOLOGY

PCDDB: the protein circular dichroism data bank, a repository for circular dichroism spectral and metadata

(2010) Lee Whitmore et al.   NUCLEIC ACIDS RESEARCH

Estimation of the number of α-helical and β-strand segments in proteins using circular dichroism spectroscopy

(2010) Narasimha Sreerama et al.   PROTEIN SCIENCE

Protein characterisation by synchrotron radiation circular dichroism spectroscopy

(2010) B. A. Wallace   QUARTERLY REVIEWS OF BIOPHYSICS

Circular dichroism spectroscopy has intrinsic limitations for protein secondary structure analysis

(2009) Sergei Khrapunov   ANALYTICAL BIOCHEMISTRY

K2D2: Estimation of protein secondary structure from circular dichroism spectra

(2008) Carolina Perez-Iratxeta et al.   BMC STRUCTURAL BIOLOGY