Single-cell transcriptome sequencing allows genetic separation, characterization and identification of individuals in multi-person biological mixtures

Twelve years of SAMtools and BCFtools

(2021) Petr Danecek et al.   GigaScience

Revisiting single cell analysis in forensic science

(2021) Davis R. L. Watkins et al.   Scientific Reports

Souporcell: robust clustering of single-cell RNA-seq data by genotype without reference genotypes

(2020) Haynes Heaton et al.   NATURE METHODS

Mixture deconvolution by massively parallel sequencing of microhaplotypes

(2019) Lindsay Bennett et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Greytak et al., 2018Genetic genealogy for cold case and active investigations

(2019) Ellen M. Greytak et al.   FORENSIC SCIENCE INTERNATIONAL

The single-cell sequencing: new developments and medical applications

(2019) Xiaoning Tang et al.   Cell and Bioscience

Genotype Imputation from Large Reference Panels

(2018) Sayantan Das et al.   Annual Review of Genomics and Human Genetics

A 1204-single nucleotide polymorphism and insertion–deletion polymorphism panel for massively parallel sequencing analysis of DNA mixtures

(2018) Hsiao-Lin Hwa et al.   Forensic Science International-Genetics

Enhanced DNA mixture deconvolution of sexual offense samples using the DEPArray™ system

(2018) Victoria R. Williamson et al.   Forensic Science International-Genetics

Yleaf: Software for Human Y-Chromosomal Haplogroup Inference from Next-Generation Sequencing Data

(2018) Arwin Ralf et al.   MOLECULAR BIOLOGY AND EVOLUTION

DNA mixtures interpretation – A proof-of-concept multi-software comparison highlighting different probabilistic methods’ performances on challenging samples

(2018) E. Alladio et al.   Forensic Science International-Genetics

Whose blood is it? Application of DEPArray™ technology for the identification of individual/s who contributed blood to a mixed stain

(2018) K. Anslinger et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

The Probabilistic Genotyping Software STRmix: Utility and Evidence for its Validity

(2018) John S. Buckleton et al.   JOURNAL OF FORENSIC SCIENCES

Expanding beyond the current core STR loci: An exploration of 73 STR markers with increased diversity for enhanced DNA mixture deconvolution

(2018) Nicole M.M. Novroski et al.   Forensic Science International-Genetics

Deconvolution of blood-blood mixtures using DEPArrayTM separated single cell STR profiling

(2018) K. Anslinger et al.   Rechtsmedizin

Isolation and genetic analysis of pure cells from forensic biological mixtures: The precision of a digital approach

(2017) F. Fontana et al.   Forensic Science International-Genetics

Forensic use of Y-chromosome DNA: a general overview

(2017) Manfred Kayser   HUMAN GENETICS

HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing

(2016) Hansi Weissensteiner et al.   NUCLEIC ACIDS RESEARCH

Forensic DNA Phenotyping: Predicting human appearance from crime scene material for investigative purposes

(2015) Manfred Kayser   Forensic Science International-Genetics

FACS separation of non-compromised forensically relevant biological mixtures

(2015) Timothy J. Verdon et al.   Forensic Science International-Genetics

Forensic genetic analysis of bio-geographical ancestry

(2015) Chris Phillips   Forensic Science International-Genetics

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

NbClust: AnRPackage for Determining the Relevant Number of Clusters in a Data Set

(2015) Malika Charrad et al.   Journal of Statistical Software

On the interpretation of likelihood ratios in forensic science evidence: Presentation formats and the weak evidence effect

(2014) K.A. Martire et al.   FORENSIC SCIENCE INTERNATIONAL

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

(2013) Edward Y Chen et al.   BMC BIOINFORMATICS

Second generation sequencing allows for mtDNA mixture deconvolution and high resolution detection of heteroplasmy

(2011) Mitchell M. Holland et al.   CROATIAN MEDICAL JOURNAL

Xist regulation and function eXplored

(2011) Daphne B. Pontier et al.   HUMAN GENETICS

Validating TrueAllele® DNA Mixture Interpretation*,†

(2011) Mark W. Perlin et al.   JOURNAL OF FORENSIC SCIENCES

Improving human forensics through advances in genetics, genomics and molecular biology

(2011) Manfred Kayser et al.   NATURE REVIEWS GENETICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Mixture Interpretation: Defining the Relevant Features for Guidelines for the Assessment of Mixed DNA Profiles in Forensic Casework

(2009) Bruce Budowle et al.   JOURNAL OF FORENSIC SCIENCES

Y chromosome diversity, human expansion, drift, and cultural evolution

(2009) J. Chiaroni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation

(2008) Mannis van Oven et al.   HUMAN MUTATION