Integrated multi‐omics analysis reveals drought stress response mechanism in chickpea (Cicer arietinum L.)

Genetic variation in CaTIFY4b contributes to drought adaptation in chickpea

(2022) Rutwik Barmukh et al.   PLANT BIOTECHNOLOGY JOURNAL

Characterization of ‘QTL-hotspot’ introgression lines reveals physiological mechanisms and candidate genes associated with drought adaptation in chickpea

(2022) Rutwik Barmukh et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genetic mapping of QTLs for drought tolerance in chickpea (Cicer arietinum L.)

(2022) Ashutosh Kushwah et al.   Frontiers in Genetics

Introgression of “ QTL‐hotspot ” region enhances drought tolerance and grain yield in three elite chickpea cultivars

(2021) Chellapilla Bharadwaj et al.   Plant Genome

Fast-forward breeding for a food-secure world

(2021) Rajeev K. Varshney et al.   TRENDS IN GENETICS

Designing Future Crops: Genomics-Assisted Breeding Comes of Age

(2021) Rajeev K. Varshney et al.   TRENDS IN PLANT SCIENCE

Analysis of Aldo–Keto Reductase Gene Family and Their Responses to Salt, Drought, and Abscisic Acid Stresses in Medicago truncatula

(2020) Jie Yu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Mesophyll ABA restrains early growth and flowering but does not directly suppress photosynthesis

(2019) Boaz Negin et al.   PLANT PHYSIOLOGY

Characterization of the main chickpea cropping systems in India using a yield gap analysis approach

(2018) Amir Hajjarpoor et al.   FIELD CROPS RESEARCH

Analysis of pcC13-62 promoters predicts a link between cis-element variations and desiccation tolerance in Linderniaceae

(2018) Valentino Giarola et al.   JOURNAL OF EXPERIMENTAL BOTANY

The RNA-Seq-based high resolution gene expression atlas of chickpea (Cicer arietinum L.) reveals dynamic spatio-temporal changes associated with growth and development

(2018) Himabindu Kudapa et al.   PLANT CELL AND ENVIRONMENT

RNA-Seq analysis revealed genes associated with drought stress response in kabuli chickpea (Cicer arietinum L.)

(2018) Keyvan Mahdavi Mashaki et al.   PLoS One

Mutations in a subfamily of abscisic acid receptor genes promote rice growth and productivity

(2018) Chunbo Miao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Leucine-rich repeat extensin proteins regulate plant salt tolerance in Arabidopsis

(2018) Chunzhao Zhao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Elucidating the molecular mechanisms mediating plant salt-stress responses

(2017) Yongqing Yang et al.   NEW PHYTOLOGIST

Isoflavone Malonyltransferases GmIMaT1 and GmIMaT3 Differently Modify Isoflavone Glucosides in Soybean (Glycine max) under Various Stresses

(2017) Muhammad Z. Ahmad et al.   Frontiers in Plant Science

Drought-Responsive Mechanisms in Plant Leaves Revealed by Proteomics

(2016) Xiaoli Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Comprehensive tissue-specific proteome analysis of drought stress responses in Pennisetum glaucum (L.) R. Br. (Pearl millet)

(2016) Arindam Ghatak et al.   Journal of Proteomics

A Functional Link between Mitochondria and the Cell Wall in Stress Responses

(2016) Nancy R. Hofmann   PLANT CELL

The Arabidopsis UDP-glycosyltransferases UGT79B2 and UGT79B3, contribute to cold, salt and drought stress tolerance via modulating anthocyanin accumulation

(2016) Pan Li et al.   PLANT JOURNAL

Overexpression of a Pathogenesis-Related Protein 10 Enhances Biotic and Abiotic Stress Tolerance in Rice

(2016) Jingni Wu et al.   Plant Pathology Journal

Genetic diversity at the Dhn3 locus in Turkish Hordeum spontaneum populations with comparative structural analyses

(2016) Cüneyt Uçarlı et al.   Scientific Reports

Analysis of Drought-Induced Proteomic and Metabolomic Changes in Barley (Hordeum vulgare L.) Leaves and Roots Unravels Some Aspects of Biochemical Mechanisms Involved in Drought Tolerance

(2016) Klaudia Chmielewska et al.   Frontiers in Plant Science

Genome-Wide Identification, Expression Diversication of Dehydrin Gene Family and Characterization of CaDHN3 in Pepper (Capsicum annuum L.)

(2016) Hua Jing et al.   PLoS One

Transcriptome analyses reveal genotype- and developmental stage-specific molecular responses to drought and salinity stresses in chickpea

(2016) Rohini Garg et al.   Scientific Reports

Scope for improvement of yield under drought through the root traits in chickpea (Cicer arietinum L.)

(2015) J. Kashiwagi et al.   FIELD CROPS RESEARCH

Heat-Treatment-Responsive Proteins in Different Developmental Stages of Tomato Pollen Detected by Targeted Mass Accuracy Precursor Alignment (tMAPA)

(2015) Palak Chaturvedi et al.   JOURNAL OF PROTEOME RESEARCH

Prioritization of candidate genes in “QTL-hotspot” region for drought tolerance in chickpea (Cicer arietinum L.)

(2015) Sandip M Kale et al.   Scientific Reports

Low Temperature-Induced 30 (LTI30) positively regulates drought stress resistance in Arabidopsis: effect on abscisic acid sensitivity and hydrogen peroxide accumulation

(2015) Haitao Shi et al.   Frontiers in Plant Science

Post-transcriptional and post-translational regulations of drought and heat response in plants: a spider’s web of mechanisms

(2015) Davide Guerra et al.   Frontiers in Plant Science

NGS-QCbox and Raspberry for Parallel, Automated and Rapid Quality Control Analysis of Large-Scale Next Generation Sequencing (Illumina) Data

(2015) Mohan A. V. S. K. Katta et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Comprehensive Transcriptome Assembly of Chickpea (Cicer arietinum L.) Using Sanger and Next Generation Sequencing Platforms: Development and Applications

(2014) Himabindu Kudapa et al.   PLoS One

Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches

(2014) Mahendar Thudi et al.   PLoS One

Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers

(2014) Manish Roorkiwal et al.   Frontiers in Plant Science

Bridging the gap between transcriptome and proteome measurements identifies post-translationally regulated genes

(2013) Y. Gunawardana et al.   BIOINFORMATICS

Cell-specific Analysis of the Tomato Pollen Proteome from Pollen Mother Cell to Mature Pollen Provides Evidence for Developmental Priming

(2013) Palak Chaturvedi et al.   JOURNAL OF PROTEOME RESEARCH

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

(2013) Rajeev K Varshney et al.   NATURE BIOTECHNOLOGY

Fast-Track Introgression of “ for Root Traits and Other Drought Tolerance Traits in JG 11, an Elite and Leading Variety of Chickpea

(2013) Rajeev K. Varshney et al.   Plant Genome

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Metabolite Adjustments in Drought Tolerant and Sensitive Soybean Genotypes in Response to Water Stress

(2012) Sonia Silvente et al.   PLoS One

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

The Role of Annexin 1 in Drought Stress in Arabidopsis

(2009) D. Konopka-Postupolska et al.   PLANT PHYSIOLOGY