Hamster model for post-COVID-19 alveolar regeneration offers an opportunity to understand post-acute sequelae of SARS-CoV-2

Ferrets are valuable models for SARS-CoV-2 research

(2022) Malgorzata Ciurkiewicz et al.   VETERINARY PATHOLOGY

Abnormal respiratory progenitors in fibrotic lung injury

(2022) Ting Xie et al.   Stem Cell Research & Therapy

Pathophysiology and mechanism of long COVID: a comprehensive review

(2022) D. Castanares-Zapatero et al.   ANNALS OF MEDICINE

Exploring the recovery curve for long-term post-COVID dyspnea and fatigue

(2022) César Fernández-de-las-Peñas et al.   European Journal of Internal Medicine

SARS-CoV-2 Infection Dysregulates Cilia and Basal Cell Homeostasis in the Respiratory Epithelium of Hamsters

(2022) Tom Schreiner et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Interstitial pneumonia and diffuse alveolar damage in domestic animals

(2022) Francisco R. Carvallo et al.   VETERINARY PATHOLOGY

SARS-CoV-2 infection in hamsters and humans results in lasting and unique systemic perturbations post recovery

(2022) Justin J. Frere et al.   Science Translational Medicine

SARS-CoV-2 infection produces chronic pulmonary epithelial and immune cell dysfunction with fibrosis in mice

(2022) Kenneth H. Dinnon et al.   Science Translational Medicine

SARS-CoV-2 Omicron variant causes mild pathology in the upper and lower respiratory tract of hamsters

(2022) Federico Armando et al.   Nature Communications

Short and Long Term Non-Invasive Cardiopulmonary Exercise Assessment in previously Hospitalized COVID-19 Patients

(2022) Inderjit Singh et al.   EUROPEAN RESPIRATORY JOURNAL

Potential mechanisms for lung fibrosis associated with COVID-19 infection

(2022) T Parimon et al.   QJM-AN INTERNATIONAL JOURNAL OF MEDICINE

The fatal trajectory of pulmonary COVID-19 is driven by lobular ischemia and fibrotic remodelling

(2022) Maximilian Ackermann et al.   EBioMedicine

Pulmonary function and radiological features four months after COVID-19: first results from the national prospective observational Swiss COVID-19 lung study

(2021) Sabina A. Guler et al.   EUROPEAN RESPIRATORY JOURNAL

SARS-CoV-2 Causes a Systemically Multiple Organs Damages and Dissemination in Hamsters

(2021) Zhiqi Song et al.   Frontiers in Microbiology

Attributes and predictors of long COVID

(2021) Carole H. Sudre et al.   NATURE MEDICINE

Intratumoral Canine Distemper Virus Infection Inhibits Tumor Growth by Modulation of the Tumor Microenvironment in a Murine Xenograft Model of Canine Histiocytic Sarcoma

(2021) Federico Armando et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A molecular single-cell lung atlas of lethal COVID-19

(2021) Johannes C. Melms et al.   NATURE

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

(2021) Toni M. Delorey et al.   NATURE

Post-acute COVID-19 syndrome

(2021) Ani Nalbandian et al.   NATURE MEDICINE

Vascular Inflammation Is Associated with Loss of Aquaporin 1 Expression on Endothelial Cells and Increased Fluid Leakage in SARS-CoV-2 Infected Golden Syrian Hamsters

(2021) Lisa Allnoch et al.   Viruses-Basel

Vasculitis and Neutrophil Extracellular Traps in Lungs of Golden Syrian Hamsters With SARS-CoV-2

(2021) Kathrin Becker et al.   Frontiers in Immunology

Pulmonary Sequelae at 4 Months After COVID-19 Infection: A Single-Centre Experience of a COVID Follow-Up Service

(2021) Rebecca C. Robey et al.   ADVANCES IN THERAPY

Integrated analysis of multimodal single-cell data

(2021) Yuhan Hao et al.   CELL

Virus-induced senescence is driver and therapeutic target in COVID-19

(2021) Soyoung Lee et al.   NATURE

Temporal omics analysis in Syrian hamsters unravel cellular effector responses to moderate COVID-19

(2021) Geraldine Nouailles et al.   Nature Communications

Fatal COVID-19 and Non–COVID-19 Acute Respiratory Distress Syndrome Is Associated with Incomplete Alveolar Type 1 Epithelial Cell Differentiation from the Transitional State without Fibrosis

(2021) Christopher Ting et al.   AMERICAN JOURNAL OF PATHOLOGY

Progression and Resolution of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection in Golden Syrian Hamsters

(2021) Kathleen R. Mulka et al.   AMERICAN JOURNAL OF PATHOLOGY

Long-term complications of COVID-19

(2021) Amar D. Desai et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

Associations of Post-Acute COVID syndrome with physiological and clinical measures 10 months after hospitalization in patients of the first wave

(2021) Anna Staudt et al.   European Journal of Internal Medicine

Ineffectual AEC2-to-AEC1 Differentiation in IPF: Persistence of KRT8hi Transitional State

(2020) Peng Jiang et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Distinct Airway Epithelial Stem Cells Hide among Club Cells but Mobilize to Promote Alveolar Regeneration

(2020) Jaymin J. Kathiriya et al.   Cell Stem Cell

Chronic WNT/β-catenin signaling induces cellular senescence in lung epithelial cells

(2020) Mareike Lehmann et al.   CELLULAR SIGNALLING

Bi-directional differentiation of single bronchioalveolar stem cells during lung repair

(2020) Kuo Liu et al.   Cell Discovery

A Specialized Few Among Many: Identification of a Novel Lung Epithelial Stem Cell Population

(2020) Christina E. Barkauskas   Cell Stem Cell

Surgical mask partition reduces the risk of non-contact transmission in a golden Syrian hamster model for Coronavirus Disease 2019 (COVID-19)

(2020) Jasper Fuk-Woo Chan et al.   CLINICAL INFECTIOUS DISEASES

Pathogenesis and transmission of SARS-CoV-2 in golden hamsters

(2020) Sin Fun Sia et al.   NATURE

Stem Cells and Lung Regeneration

(2020) Kalpaj R. Parekh et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

Pulmonary alveolar regeneration in adult COVID-19 patients

(2020) Jingyu Chen et al.   CELL RESEARCH

Mesenchymal to epithelial transition driven by canine distemper virus infection of canine histiocytic sarcoma cells contributes to a reduced cell motility in vitro

(2020) Federico Armando et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

Pulmonary post-mortem findings in a series of COVID-19 cases from northern Italy: a two-centre descriptive study

(2020) Luca Carsana et al.   LANCET INFECTIOUS DISEASES

A systematic review of pathological findings in COVID-19: a pathophysiological timeline and possible mechanisms of disease progression

(2020) Samuel B. Polak et al.   MODERN PATHOLOGY

Persistence of a regeneration-associated, transitional alveolar epithelial cell state in pulmonary fibrosis

(2020) Yoshihiko Kobayashi et al.   NATURE CELL BIOLOGY

Alveolar regeneration through a Krt8+ transitional stem cell state that persists in human lung fibrosis

(2020) Maximilian Strunz et al.   Nature Communications

Senescence of Alveolar Type 2 Cells Drives Progressive Pulmonary Fibrosis

(2020) Changfu Yao et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Single‐cell analysis identified lung progenitor cells in COVID‐19 patients

(2020) Zixian Zhao et al.   CELL PROLIFERATION

Animal models for COVID-19

(2020) César Muñoz-Fontela et al.   NATURE

SARS-CoV-2 infection of human ACE2-transgenic mice causes severe lung inflammation and impaired function

(2020) Emma S. Winkler et al.   NATURE IMMUNOLOGY

Endocanalicular transendothelial crossing (ETC): A novel intravasation mode used by HEK-EBNA293-VEGF-D cells during the metastatic process in a xenograft model

(2020) Federico Armando et al.   PLoS One

Lung transplantation for patients with severe COVID-19

(2020) Ankit Bharat et al.   Science Translational Medicine

Dlk1-Mediated Temporal Regulation of Notch Signaling Is Required for Differentiation of Alveolar Type II to Type I Cells during Repair

(2019) Johanna Finn et al.   Cell Reports

Lung regeneration by multipotent stem cells residing at the bronchioalveolar-duct junction

(2019) Qiaozhen Liu et al.   NATURE GENETICS

Comprehensive Integration of Single-Cell Data

(2019) Tim Stuart et al.   CELL

Progressive Pulmonary Fibrosis Is Caused by Elevated Mechanical Tension on Alveolar Stem Cells

(2019) Huijuan Wu et al.   CELL

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Paracrine signalling during ZEB1-mediated epithelial–mesenchymal transition augments local myofibroblast differentiation in lung fibrosis

(2018) Liudi Yao et al.   CELL DEATH AND DIFFERENTIATION

Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor

(2018) William J. Zacharias et al.   NATURE

QuPath: Open source software for digital pathology image analysis

(2017) Peter Bankhead et al.   Scientific Reports

Squish and squeeze — the nucleus as a physical barrier during migration in confined environments

(2016) Alexandra Lynn McGregor et al.   CURRENT OPINION IN CELL BIOLOGY

Using electron microscopes to look into the lung

(2016) Matthias Ochs et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Identification of cell types from single-cell transcriptomes using a novel clustering method

(2015) Chen Xu et al.   BIOINFORMATICS

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

(2015) Jacob H. Levine et al.   CELL

Spatial reconstruction of single-cell gene expression data

(2015) Rahul Satija et al.   NATURE BIOTECHNOLOGY

Macrophages During the Fibrotic Process: M2 as Friend and Foe

(2015) Tarcio Teodoro Braga et al.   Frontiers in Immunology

The Molecular Signatures Database Hallmark Gene Set Collection

(2015) Arthur Liberzon et al.   Cell Systems

p63+Krt5+ distal airway stem cells are essential for lung regeneration

(2014) Wei Zuo et al.   NATURE

Lineage-negative progenitors mobilize to regenerate lung epithelium after major injury

(2014) Andrew E. Vaughan et al.   NATURE

Repair of tracheal epithelium by basal cells after chlorine-induced injury

(2012) Sadiatu Musah et al.   RESPIRATORY RESEARCH