Phylomitogenomics reveals mito‐nuclear concordance in social wasps: The performance of mitochondrial markers and gene order for hymenopteran systematics

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(2023) Bonnie B. Blaimer et al.   Nature Communications

On the Need for New Measures of Phylogenomic Support

(2022) Robert C Thomson et al.   SYSTEMATIC BIOLOGY

A systematic review of the Neotropical social wasp genus Angiopolybia Araujo, 1946 (Hymenoptera: Vespidae): species delimitation, morphological diagnosis, and geographical distribution

(2022) Paulo Cézar Salgado Barroso et al.   Arthropod Systematics & Phylogeny

Complete Nucleotide Sequence of the Mitogenome of Tapinoma ibericum (Hymenoptera: Formicidae: Dolichoderinae), Gene Organization and Phylogenetics Implications for the Dolichoderinae Subfamily

(2022) Areli Ruiz-Mena et al.   Genes

First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae)

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(2021) Zhaoke Dong et al.   ANNALS OF THE ENTOMOLOGICAL SOCIETY OF AMERICA

An integrative taxonomic and phylogenetic approach reveals a new Neotropical swarm-founding social wasp, Pseudopolybia cryptica sp. n. (Vespidae: Polistinae: Epiponini)

(2021) Alexandre Somavilla et al.   Arthropod Systematics & Phylogeny

Testing the Utility of Alternative Metrics of Branch Support to Address the Ancient Evolutionary Radiation of Tunas, Stromateoids, and Allies (Teleostei: Pelagiaria)

(2021) Dahiana Arcila et al.   SYSTEMATIC BIOLOGY

Comparative mitogenomics of Drosophilidae and the evolution of the Zygothrica genus group (Diptera, Drosophilidae)

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IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

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Phylogenomic analysis of trichomycterid catfishes (Teleostei: Siluriformes) inferred from ultraconserved elements

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Phylogenomics indicates Amazonia as the major source of Neotropical swarm-founding social wasp diversity

(2020) Rodolpho S. T. Menezes et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Complete mitochondrial DNA sequence of the paper wasp Polistes riparius (Hymenoptera: Vespidae)

(2020) Kazuhisa Yamasaki et al.   Mitochondrial DNA Part B-Resources

Marimbondos: systematics, biogeography, and evolution of social behaviour of neotropical swarm‐founding wasps (Hymenoptera: Vespidae: Epiponini)

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Evolution of tRNA gene rearrangement in the mitochondrial genome of ichneumonoid wasps (Hymenoptera: Ichneumonoidea)

(2020) Zengbei Feng et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Comparative phylogeography and palaeomodelling reveal idiosyncratic responses to climate changes in Neotropical paper wasps

(2020) Antônio F Carvalho et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Accessible molecular phylogenomics at no cost: obtaining 14 new mitogenomes for the ant subfamily Pseudomyrmecinae from public data

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Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes

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Phylogenomics and mitochondrial genome evolution of the gall-associated doryctine wasp genera (Hymenoptera: Braconidae)

(2019) Ernesto Samacá-Sáenz et al.   SYSTEMATICS AND BIODIVERSITY

ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees

(2018) Chao Zhang et al.   BMC BIOINFORMATICS

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenomic Evidence Overturns Current Conceptions of Social Evolution in Wasps (Vespidae)

(2018) Patrick K Piekarski et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeographic analysis reveals high genetic structure with uniform phenotypes in the paper wasp Protonectarina sylveirae (Hymenoptera: Vespidae)

(2018) Marjorie da Silva et al.   PLoS One

Extensive mitochondrial heteroplasmy in the neotropical ants of the Ectatomma ruidum complex (Formicidae: Ectatomminae)

(2018) Rubi N. Meza-Lázaro et al.   Mitochondrial DNA Part A

Correction: Ultraconserved elements (UCEs) resolve the phylogeny of Australasian smurf-weevils

(2018) Matthew H. Van Dam et al.   PLoS One

The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)

(2018) Qiao-Hua Zhang et al.   ZooKeys

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(2018) Pu Tang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

metaSPAdes: a new versatile metagenomic assembler

(2017) Sergey Nurk et al.   GENOME RESEARCH

UFBoot2: Improving the Ultrafast Bootstrap Approximation

(2017) Diep Thi Hoang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Integrated Analyses of Cuticular Hydrocarbons, Chromosome and mtDNA in the Neotropical Social Wasp Mischocyttarus consimilis Zikán (Hymenoptera, Vespidae)

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Synoeca ilheensis sp. nov., a new social wasp (Hymenoptera, Vespidae, Polistinae) from Brazilian lowland Atlantic Forest

(2017) ROGÉRIO B. LOPES et al.   ZOOTAXA

Genomic data reveals potential for hybridization, introgression, and incomplete lineage sorting to confound phylogenetic relationships in an adaptive radiation of narrow-mouth frogs

(2016) Alana M. Alexander et al.   EVOLUTION

The mitochondrial genome of Octostruma stenognatha and its phylogenetic implications

(2016) P. R. Ströher et al.   INSECTES SOCIAUX

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

(2016) Robert Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Sequence Capture and Phylogenetic Utility of Genomic Ultraconserved Elements Obtained from Pinned Insect Specimens

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Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa

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The mitochondrial genome ofPolistes jokahamaeand a phylogenetic analysis of the Vespoidea (Insecta: Hymenoptera)

(2015) Sheng-Nan Song et al.   Mitochondrial DNA

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Higher-level phylogeny of the Hymenoptera inferred from mitochondrial genomes

(2015) Meng Mao et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Neotropical Polistinae (Vespidae) and the Progression Rule Principle: the Round-Trip Hypothesis

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The Mitochondrial Control Region of Blowflies (Diptera: Calliphoridae): A Hot Spot for Mitochondrial Genome Rearrangements

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Molecular Phylogeny and Historical Biogeography of the Neotropical Swarm-Founding Social Wasp Genus Synoeca (Hymenoptera: Vespidae)

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Ultraconserved Elements Sequencing as a Low-Cost Source of Complete Mitochondrial Genomes and Microsatellite Markers in Non-Model Amniotes

(2015) Fábio Raposo do Amaral et al.   PLoS One

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Phylogeny and historical biogeography of the paper wasp genusPolistes(Hymenoptera: Vespidae): implications for the overwintering hypothesis of social evolution

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Genetic diversity of Angiopolybia pallens (Lepeletier) (Hymenoptera, Vespidae, Polistinae) explained by the disjunction of South American rainforests

(2014) A.F. Carvalho et al.   GENETICS AND MOLECULAR RESEARCH

Evolutionary trends in the chromosome numbers of swarm-founding social wasps

(2014) R. S. T. Menezes et al.   INSECTES SOCIAUX

Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera

(2014) Brant C. Faircloth et al.   Molecular Ecology Resources

Phylogenetic relationships of yellowjackets inferred from nine loci (Hymenoptera: Vespidae, Vespinae, Vespula and Dolichovespula)

(2014) Federico Lopez-Osorio et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Performance of Single and Concatenated Sets of Mitochondrial Genes at Inferring Metazoan Relationships Relative to Full Mitogenome Data

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Deep metazoan phylogeny: When different genes tell different stories

(2013) Tetyana Nosenko et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A Phylogenomic Perspective on the Radiation of Ray-Finned Fishes Based upon Targeted Sequencing of Ultraconserved Elements (UCEs)

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Anchored Hybrid Enrichment for Massively High-Throughput Phylogenomics

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Ultraconserved Elements Anchor Thousands of Genetic Markers Spanning Multiple Evolutionary Timescales

(2012) Brant C. Faircloth et al.   SYSTEMATIC BIOLOGY

What is the phylogenetic signal limit from mitogenomes? The reconciliation between mitochondrial and nuclear data in the Insecta class phylogeny

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(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Comparative mitogenomics of Braconidae (Insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to Holometabolous insects

(2010) Shu-jun Wei et al.   BMC GENOMICS

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Characterization of 67 Mitochondrial tRNA Gene Rearrangements in the Hymenoptera Suggests That Mitochondrial tRNA Gene Position Is Selectively Neutral

(2009) M. Dowton et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeography: retrospect and prospect

(2008) John C. Avise   JOURNAL OF BIOGEOGRAPHY

Twenty years of phylogeography: the state of the field and the challenges for the Southern Hemisphere

(2008) LUCIANO B. BEHEREGARAY   MOLECULAR ECOLOGY