Expression of malic enzyme reveals subcellular carbon partitioning for storage reserve production in soybeans

An efficient LC-MS method for isomer separation and detection of sugars, phosphorylated sugars, and organic acids

(2022) Somnath Koley et al.   JOURNAL OF EXPERIMENTAL BOTANY

Expression of AtWRI1 and AtDGAT1 during soybean embryo development influences oil and carbohydrate metabolism

(2022) Cintia Lucía Arias et al.   PLANT BIOTECHNOLOGY JOURNAL

Suppression of SDP1 Improves Soybean Seed Composition by Increasing Oil and Reducing Undigestible Oligosaccharides

(2022) Jose A. Aznar-Moreno et al.   Frontiers in Plant Science

Effects of type I Diacylglycerol O-acyltransferase (DGAT1) genes on soybean (Glycine max L.) seed composition

(2021) Sepideh Torabi et al.   Scientific Reports

Acyl‐acyl carrier protein pool dynamics with oil accumulation in nitrogen‐deprived Chlamydomonas reinhardtii microalgal cells

(2021) Joseph Msanne et al.   JOURNAL OF THE AMERICAN OIL CHEMISTS SOCIETY

Highly accurate protein structure prediction with AlphaFold

(2021) John Jumper et al.   NATURE

Genome-wide identification and analysis of soybean acyl-ACP thioesterase gene family reveals the role of GmFAT to improve fatty acid composition in soybean seed

(2021) Zhou Zhou et al.   THEORETICAL AND APPLIED GENETICS

Metabolic flux analysis of the non-transitory starch tradeoff for lipid production in mature tobacco leaves

(2021) Kevin L. Chu et al.   METABOLIC ENGINEERING

The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences

(2021) Yasset Perez-Riverol et al.   NUCLEIC ACIDS RESEARCH

Physiological functions of malate shuttles in plants and algae

(2021) Ousmane Dao et al.   TRENDS IN PLANT SCIENCE

A General Method for Quantification and Discovery of Acyl Groups Attached to Acyl Carrier Proteins in Fatty Acid Metabolism using LC-MS/MS

(2020) Jeong-Won Nam et al.   PLANT CELL

SEIPIN Isoforms Interact with the Membrane-tethering Protein VAP27-1 for Lipid Droplet Formation

(2020) Michael Scott Greer et al.   PLANT CELL

Characterization of an alternative BAK-binding site for BH3 peptides

(2020) Kaiqin Ye et al.   Nature Communications

Historical trend on seed amino acid concentration does not follow protein changes in soybeans

(2020) Andre Froes de Borja Reis et al.   Scientific Reports

Assessing Variation in US Soybean Seed Composition (Protein and Oil)

(2019) Yared Assefa et al.   Frontiers in Plant Science

Mouse lipogenic proteins promote the co-accumulation of triacylglycerols and sesquiterpenes in plant cells

(2019) Yingqi Cai et al.   PLANTA

Accurate and efficient amino acid analysis for protein quantification using hydrophilic interaction chromatography coupled tandem mass spectrometry

(2019) Shrikaar Kambhampati et al.   Plant Methods

Metabolic engineering for enhanced oil in biomass

(2019) Thomas Vanhercke et al.   PROGRESS IN LIPID RESEARCH

Multiple Gm WRI 1s are redundantly involved in seed filling and nodulation by regulating plastidic glycolysis, lipid biosynthesis, and hormone signaling in soybean ( Glycine max )

(2019) Beibei Chen et al.   PLANT BIOTECHNOLOGY JOURNAL

Soybean (Glycine max L.) triacylglycerol lipase GmSDP1 regulates the quality and quantity of seed oil

(2019) Masatake Kanai et al.   Scientific Reports

Storing carbon in leaf lipid sinks enhanced perennial ryegrass carbon capture especially under high N and elevated CO2

(2019) Z Beechey-Gradwell et al.   JOURNAL OF EXPERIMENTAL BOTANY

Tracing metabolic flux through time and space with isotope labeling experiments

(2019) Doug K Allen et al.   CURRENT OPINION IN BIOTECHNOLOGY

Extraction and Quantitation of Nicotinamide Adenine Dinucleotide Redox Cofactors

(2018) Wenyun Lu et al.   ANTIOXIDANTS & REDOX SIGNALING

In Vivo Quantitative Monitoring of Subunit Stoichiometry for Metabolic Complexes

(2018) Rashaun S. Wilson et al.   JOURNAL OF PROTEOME RESEARCH

Malate valves: Old shuttles with new perspectives

(2018) Jennifer Selinski et al.   PLANT BIOLOGY

Hydrogen Sulfide Alleviates Aluminum Toxicity via Decreasing Apoplast and Symplast Al Contents in Rice

(2018) Chun Q. Zhu et al.   Frontiers in Plant Science

Spatial Characterization of Soybean Yield and Quality (Amino Acids, Oil, and Protein) for United States

(2018) Y. Assefa et al.   Scientific Reports

Arabidopsis lipid droplet-associated protein (LDAP) - interacting protein (LDIP) influences lipid droplet size and neutral lipid homeostasis in both leaves and seeds

(2017) Michal Pyc et al.   PLANT JOURNAL

Molecular mapping and genomics of soybean seed protein: a review and perspective for the future

(2017) Gunvant Patil et al.   THEORETICAL AND APPLIED GENETICS

Assessing compartmentalized flux in lipid metabolism with isotopes

(2016) Doug K. Allen   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

Quantifying plant phenotypes with isotopic labeling & metabolic flux analysis

(2016) Doug K Allen   CURRENT OPINION IN BIOTECHNOLOGY

Potato tuber expression of ArabidopsisWRINKLED1increase triacylglycerol and membrane lipids while affecting central carbohydrate metabolism

(2016) Per Hofvander et al.   PLANT BIOTECHNOLOGY JOURNAL

Differential Contribution of Malic Enzymes during Soybean and Castor Seeds Maturation

(2016) Mariel Claudia Gerrard Wheeler et al.   PLoS One

Toward production of jet fuel functionality in oilseeds: identification of FatB acyl-acyl carrier protein thioesterases and evaluation of combinatorial expression strategies inCamelinaseeds

(2015) Hae Jin Kim et al.   JOURNAL OF EXPERIMENTAL BOTANY

Using RNA-Seq Data to Evaluate Reference Genes Suitable for Gene Expression Studies in Soybean

(2015) Aldrin Kay-Yuen Yim et al.   PLoS One

Tracking the metabolic pulse of plant lipid production with isotopic labeling and flux analyses: Past, present and future

(2015) Doug K. Allen et al.   PROGRESS IN LIPID RESEARCH

Quantification and Mass Isotopomer Profiling of α-Keto Acids in Central Carbon Metabolism

(2014) Michael Zimmermann et al.   ANALYTICAL CHEMISTRY

Fatty acid synthesis is inhibited by inefficient utilization of unusual fatty acids for glycerolipid assembly

(2014) P. D. Bates et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Isotopically nonstationary13C flux analysis of changes inArabidopsis thalianaleaf metabolism due to high light acclimation

(2014) Fangfang Ma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Synergistic effect of WRI1 and DGAT1 coexpression on triacylglycerol biosynthesis in plants

(2013) Thomas Vanhercke et al.   FEBS LETTERS

Influence of carbon to nitrogen ratios on soybean somatic embryo (cv. Jack) growth and composition

(2013) Quyen Truong et al.   JOURNAL OF EXPERIMENTAL BOTANY

Carbon and Nitrogen Provisions Alter the Metabolic Flux in Developing Soybean Embryos

(2013) D. K. Allen et al.   PLANT PHYSIOLOGY

In Vivo Packaging of Triacylglycerols Enhances Arabidopsis Leaf Biomass and Energy Density

(2013) S. Winichayakul et al.   PLANT PHYSIOLOGY

Evaluation and Validation of Reference Genes for Normalization of Quantitative Real-Time PCR Based Gene Expression Studies in Peanut

(2013) Dumbala Srinivas Reddy et al.   PLoS One

Isotope labelling of Rubisco subunits provides in vivo information on subcellular biosynthesis and exchange of amino acids between compartments

(2012) DOUG K. ALLEN et al.   PLANT CELL AND ENVIRONMENT

Soluble MICA and a MICA Variation as Possible Prognostic Biomarkers for HBV-Induced Hepatocellular Carcinoma

(2012) Vinod Kumar et al.   PLoS One

Feedback regulation of plastidic acetyl-CoA carboxylase by 18:1-acyl carrier protein in Brassica napus

(2012) C. Andre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analysis of theArabidopsisCytosolic Proteome Highlights Subcellular Partitioning of Central Plant Metabolism

(2011) Jun Ito et al.   JOURNAL OF PROTEOME RESEARCH

Expression of ZmLEC1 and ZmWRI1 Increases Seed Oil Production in Maize

(2010) B. Shen et al.   PLANT PHYSIOLOGY

Collaborative Trial Validation Studies of Real-Time PCR-Based GMO Screening Methods for Detection of thebarGene and thectp2-cp4epspsConstruct

(2009) Lutz Grohmann et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Metabolic flux analysis in plants: coping with complexity

(2009) DOUG K. ALLEN et al.   PLANT CELL AND ENVIRONMENT

Soybean Oil: Genetic Approaches for Modification of Functionality and Total Content

(2009) T. E. Clemente et al.   PLANT PHYSIOLOGY

Validation of internal control for gene expression study in soybean by quantitative real-time PCR

(2008) Bo Jian et al.   BMC MOLECULAR BIOLOGY

Converting Nitrogen into Protein—Beyond 6.25 and Jones' Factors

(2008) François Mariotti et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Proteomic analysis of soybean nodule cytosol

(2008) Nathan W. Oehrle et al.   PHYTOCHEMISTRY

Metabolic flux maps comparing the effect of temperature on protein and oil biosynthesis in developing soybean cotyledons

(2008) VIDYA V. IYER et al.   PLANT CELL AND ENVIRONMENT

The role of light in soybean seed filling metabolism

(2008) Doug K. Allen et al.   PLANT JOURNAL

Arabidopsis NAD-Malic Enzyme Functions As a Homodimer and Heterodimer and Has a Major Impact on Nocturnal Metabolism

(2008) M. A. Tronconi et al.   PLANT PHYSIOLOGY