A pan-grass transcriptome reveals patterns of cellular divergence in crops
Published 2023 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A pan-grass transcriptome reveals patterns of cellular divergence in crops
Authors
Keywords
-
Journal
NATURE
Volume 617, Issue 7962, Pages 785-791
Publisher
Springer Science and Business Media LLC
Online
2023-05-11
DOI
10.1038/s41586-023-06053-0
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Plant glutamate receptors mediate a bet-hedging strategy between regeneration and defense
- (2022) Marcela Hernández-Coronado et al. DEVELOPMENTAL CELL
- Single-Cell RNA Sequencing for Plant Research: Insights and Possible Benefits
- (2022) George Bawa et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Coexpression reveals conserved gene programs that co-vary with cell type across kingdoms
- (2022) Megan Crow et al. NUCLEIC ACIDS RESEARCH
- Dosage compensation evolution in plants: theories, controversies and mechanisms
- (2022) Aline Muyle et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- RppM, Encoding a Typical CC-NBS-LRR Protein, Confers Resistance to Southern Corn Rust in Maize
- (2022) Shuai Wang et al. Frontiers in Plant Science
- MINI-EX: Integrative inference of single-cell gene regulatory networks in plants
- (2022) Camilla Ferrari et al. Molecular Plant
- Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery
- (2021) Xiaosa Xu et al. DEVELOPMENTAL CELL
- Single-nucleus RNA and ATAC sequencing reveals the impact of chromatin accessibility on gene expression in Arabidopsis roots at the single-cell level
- (2021) Andrew Farmer et al. Molecular Plant
- Innovation, conservation, and repurposing of gene function in root cell type development
- (2021) Kaisa Kajala et al. CELL
- A cis-regulatory atlas in maize at single-cell resolution
- (2021) Alexandre P. Marand et al. CELL
- Scaling up reproducible research for single-cell transcriptomics using MetaNeighbor
- (2021) Stephan Fischer et al. Nature Protocols
- Ground tissue circuitry regulates organ complexity in maize and Setaria
- (2021) Carlos Ortiz-Ramírez et al. SCIENCE
- Tissue-specific gene expression and protein abundance patterns are associated with fractionation bias in maize
- (2020) Jesse R. Walsh et al. BMC PLANT BIOLOGY
- Systematic comparison of single-cell and single-nucleus RNA-sequencing methods
- (2020) Jiarui Ding et al. NATURE BIOTECHNOLOGY
- Genome-wide selection and genetic improvement during modern maize breeding
- (2020) Baobao Wang et al. NATURE GENETICS
- MRG1/2 histone methylation readers and HD2C histone deacetylase associate in repression of the florigen gene FT to set a proper flowering time in response to day‐length changes
- (2020) Zhihao Guo et al. NEW PHYTOLOGIST
- CoCoCoNet: conserved and comparative co-expression across a diverse set of species
- (2020) John Lee et al. NUCLEIC ACIDS RESEARCH
- Elongating maize root: zone-specific combinations of polysaccharides from type I and type II primary cell walls
- (2020) Liudmila V. Kozlova et al. Scientific Reports
- The Transcription Factor bZIP60 Links the Unfolded Protein Response (UPR) to the Heat Stress Response (HSR) in Maize
- (2020) Zhaoxia Li et al. PLANT CELL
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- scGen predicts single-cell perturbation responses
- (2019) Mohammad Lotfollahi et al. NATURE METHODS
- Parallelism and convergence in post-domestication adaptation in cereal grasses
- (2019) M. R. Woodhouse et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Sticky mucilages and exudates of plants: putative microenvironmental design elements with biotechnological value
- (2019) Andrew F. Galloway et al. NEW PHYTOLOGIST
- Cross-Species Analysis of Single-Cell Transcriptomic Data
- (2019) Maxwell E. R. Shafer Frontiers in Cell and Developmental Biology
- Shared genetic control of root system architecture between Zea mays and Sorghum bicolor
- (2019) Zihao Zheng et al. PLANT PHYSIOLOGY
- Single-Cell Transcriptomics: A High-Resolution Avenue for Plant Functional Genomics
- (2019) Charlotte Rich-Griffin et al. TRENDS IN PLANT SCIENCE
- ArabidopsismRNA decay landscape arises from specialized RNA decay substrates, decapping-mediated feedback, and redundancy
- (2018) Reed S. Sorenson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Characterizing the replicability of cell types defined by single cell RNA-sequencing data using MetaNeighbor
- (2018) Megan Crow et al. Nature Communications
- Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota
- (2018) Allen Van Deynze et al. PLOS BIOLOGY
- Gene Fractionation and Function in the Ancient Subgenomes of Maize
- (2017) Simon Renny-Byfield et al. MOLECULAR BIOLOGY AND EVOLUTION
- Differentially Regulated Orthologs in Sorghum and the Subgenomes of Maize
- (2017) Yang Zhang et al. PLANT CELL
- Patterns and Consequences of Subgenome Differentiation Provide Insights into the Nature of Paleopolyploidy in Plants
- (2017) Meixia Zhao et al. PLANT CELL
- Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias
- (2016) Lin Li et al. BMC GENOMICS
- Genome Alignment Spanning Major Poaceae Lineages Reveals Heterogeneous Evolutionary Rates and Alters Inferred Dates for Key Evolutionary Events
- (2015) Xiyin Wang et al. Molecular Plant
- MUCILAGE-RELATED10 Produces Galactoglucomannan That Maintains Pectin and Cellulose Architecture in Arabidopsis Seed Mucilage
- (2015) Cătălin Voiniciuc et al. PLANT PHYSIOLOGY
- Quantification of cell identity from single-cell gene expression profiles
- (2015) Idan Efroni et al. GENOME BIOLOGY
- The impact of widespread regulatory neofunctionalization on homeolog gene evolution following whole-genome duplication in maize
- (2014) Thomas E. Hughes et al. GENOME RESEARCH
- Comparison of Drought Tolerance of Maize, Sweet Sorghum and Sorghum-Sudangrass Hybrids
- (2013) S. Schittenhelm et al. JOURNAL OF AGRONOMY AND CROP SCIENCE
- Homoeolog expression bias and expression level dominance in allopolyploids
- (2012) C. E. Grover et al. NEW PHYTOLOGIST
- Gene balance hypothesis: Connecting issues of dosage sensitivity across biological disciplines
- (2012) J. A. Birchler et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss
- (2011) J. C. Schnable et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Mucilage Proteome of Maize (Zea maysL.) Primary Roots
- (2010) Wei Ma et al. JOURNAL OF PROTEOME RESEARCH
- Regulation of preprocambial cell state acquisition by auxin signaling in Arabidopsis leaves
- (2009) T. J. Donner et al. DEVELOPMENT
- Reciprocal Silencing, Transcriptional Bias and Functional Divergence of Homeologs in Polyploid Cotton (Gossypium)
- (2009) B. Chaudhary et al. GENETICS
- The evolution of cell types in animals: emerging principles from molecular studies
- (2008) Detlev Arendt NATURE REVIEWS GENETICS
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started