More than meets the eye: characterizing the cryptic species complex and Symbiodiniaceae communities in the reef-dwelling nudibranch Pteraeolidia ‘semperi’ (Nudibranchia: Aeolidioidea) from Singapore

Limited influence of seasonality on coral microbiomes and endosymbionts in an equatorial reef

(2023) Z.B. Randolph Quek et al.   ECOLOGICAL INDICATORS

Phyllidiidae (Nudibranchia, Heterobranchia, Gastropoda): an integrative taxonomic approach including chemical analyses

(2022) Adelfia Papu et al.   ORGANISMS DIVERSITY & EVOLUTION

Cladobranchia (Gastropoda, Nudibranchia) as a Promising Model to Understand the Molecular Evolution of Photosymbiosis in Animals

(2022) Marcellina Rola et al.   Frontiers in Marine Science

Species and spatio-environmental effects on coral endosymbiont communities in Southeast Asia

(2022) Jing Hui Ong et al.   CORAL REEFS

Bacterial and Fungal Co-Occurrence in the Nudibranch, Pteraeolidia semperi

(2022) Ming Sheng Ng et al.   Life-Basel

A new species of Sakuraeolis from Mozambique, described using 3D reconstruction of anatomy and phylogenetic analysis

(2021) Dawn C Ellis-Diamond et al.   JOURNAL OF MOLLUSCAN STUDIES

At-risk marine biodiversity faces extensive, expanding, and intensifying human impacts

(2021) Casey C. O’Hara et al.   SCIENCE

DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review

(2021) Romy Gielings et al.   Frontiers in Marine Science

Endosymbiont diversity and community structure in Porites lutea from Southeast Asia are driven by a suite of environmental variables

(2020) Yuen Ting Rachel Tan et al.   SYMBIOSIS

Low diversity or poorly explored? Mesophotic molluscs highlight undersampling in the Eastern Mediterranean

(2020) Paolo G. Albano et al.   BIODIVERSITY AND CONSERVATION

ASAP: Assemble Species by Automatic Partitioning

(2020) Nicolas Puillandre et al.   Molecular Ecology Resources

The extraordinary genus Myja is not a tergipedid, but related to the Facelinidae s. str. with the addition of two new species from Japan (Mollusca, Nudibranchia)

(2019) Alexander Martynov et al.   ZooKeys

SymPortal: a novel analytical framework and platform for coral algal symbiont next-generation sequencing ITS2 profiling

(2019) B. C. C. Hume et al.   Molecular Ecology Resources

RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference

(2019) Alexey M Kozlov et al.   BIOINFORMATICS

Outgroup sampling in phylogenetics: Severity of test and successive outgroup expansion

(2019) Taran Grant   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models

(2019) Diego Darriba et al.   MOLECULAR BIOLOGY AND EVOLUTION

Searching for phylogenetic patterns of Symbiodiniaceae community structure among Indo-Pacific Merulinidae corals

(2019) Sébastien Leveque et al.   PeerJ

Delimitation of cryptic species drastically reduces the geographical ranges of marine interstitial ghost-worms (Stygocapitella; Annelida, Sedentaria)

(2019) José Cerca et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Cryptic ecological and geographic diversification in coral-associated nudibranchs

(2019) Allison L. Fritts-Penniman et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

From marine park to future genomic observatory? Enhancing marine biodiversity assessments using a biocode approach

(2019) Yin Cheong Aden Ip et al.   Biodiversity Data Journal

Coral color and depth drive symbiosis ecology of Montipora capitata in Kāne‘ohe Bay, O‘ahu, Hawai‘i

(2018) T. Innis et al.   CORAL REEFS

DNA barcoding a nightmare taxon: assessing barcode index numbers and barcode gaps for sweat bees

(2018) Jason Gibbs   GENOME

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenetic analyses of Symbiodinium isolated from Waminoa and their anthozoan hosts in the Ryukyu Archipelago, southern Japan

(2018) Shiori Kunihiro et al.   SYMBIOSIS

An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region

(2018) Benjamin C.C. Hume et al.   PeerJ

Comparative morphology and evolution of the cnidosac in Cladobranchia (Gastropoda: Heterobranchia: Nudibranchia)

(2018) Jessica A. Goodheart et al.   Frontiers in Zoology

Biogeography and molecular diversity of coral symbionts in the genus Symbiodinium around the Arabian Peninsula

(2017) Maren Ziegler et al.   JOURNAL OF BIOGEOGRAPHY

Climate impacts on global hot spots of marine biodiversity

(2017) Francisco Ramírez et al.   Science Advances

Symbiodiniumbiogeography tracks environmental patterns rather than host genetics in a key Caribbean reef-builder,Orbicella annularis

(2016) Emma V. Kennedy et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Aeolidia papillosa(Linnaeus, 1761) (Mollusca: Heterobranchia: Nudibranchia), single species or a cryptic species complex? A morphological and molecular study

(2016) Karen Kienberger et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Marine habitats and biodiversity of Singapore’s coastal waters: A review

(2016) Koh Siang Tan et al.   Regional Studies in Marine Science

27 years of benthic and coral community dynamics on turbid, highly urbanised reefs off Singapore

(2016) J. R. Guest et al.   Scientific Reports

Dinoflagellate diversity among nudibranchs and sponges from French Polynesia: Insights into associations and transfer

(2015) Patricia Wecker et al.   COMPTES RENDUS BIOLOGIES

Comparison of Symbiodinium dinoflagellate flora in sea slug populations of the Pteraeolidia ianthina complex

(2015) M Yorifuji et al.   MARINE ECOLOGY PROGRESS SERIES

Here be dragons - phylogeography ofPteraeolidia ianthina(Angas, 1864) reveals multiple species of photosynthetic nudibranchs (Aeolidina: Nudibranchia)

(2015) Nerida G Wilson et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Comparison of Symbiodinium dinoflagellate flora in sea slug populations of the Pteraeolidia ianthina complex

(2015) M Yorifuji et al.   MARINE ECOLOGY PROGRESS SERIES

Thermal stress response in a dinoflagellate-bearing nudibranch and the octocoral on which it feeds

(2014) Maren Ziegler et al.   CORAL REEFS

A general species delimitation method with applications to phylogenetic placements

(2013) Jiajie Zhang et al.   BIOINFORMATICS

HOST-SPECIALIST LINEAGES DOMINATE THE ADAPTIVE RADIATION OF REEF CORAL ENDOSYMBIONTS

(2013) Daniel J. Thornhill et al.   EVOLUTION

Corals from the Persian/Arabian Gulf as models for thermotolerant reef-builders: Prevalence of clade C3 Symbiodinium, host fluorescence and ex situ temperature tolerance

(2013) B. Hume et al.   MARINE POLLUTION BULLETIN

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Tale That Morphology Fails to Tell: A Molecular Phylogeny of Aeolidiidae (Aeolidida, Nudibranchia, Gastropoda)

(2013) Leila Carmona et al.   PLoS One

Symbiodinium diversity in the soft coral Heteroxenia sp. and its nudibranch predator Phyllodesmium lizardensis

(2012) S. K. FitzPatrick et al.   CORAL REEFS

The Magnitude of Global Marine Species Diversity

(2012) Ward Appeltans et al.   CURRENT BIOLOGY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Hidden Diversity in a Reef-Dwelling Sea Slug,Pteraeolidia ianthina(Nudibranchia, Aeolidina), in the Northwestern Pacific

(2012) Makiko Yorifuji et al.   ZOOLOGICAL SCIENCE

Patterns of Speciation in Marine Gastropods: A Review of the Phylogenetic Evidence for Localized Radiations in the Sea*

(2011) Patrick J. Krug   AMERICAN MALACOLOGICAL BULLETIN

Speciation in the Sea: Overview of the Symposium and Discussion of Future Directions

(2011) M. P. Miglietta et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

The Relative Significance of Host–Habitat, Depth, and Geography on the Ecology, Endemism, and Speciation of Coral Endosymbionts in the Genus Symbiodinium

(2010) J. Christine Finney et al.   MICROBIAL ECOLOGY

Species delimitation of common reef corals in the genus Pocillopora using nucleotide sequence phylogenies, population genetics and symbiosis ecology

(2010) JORGE H. PINZÓN et al.   MOLECULAR ECOLOGY

The first molecular phylogeny of cladobranchian opisthobranchs (Mollusca, Gastropoda, Nudibranchia)

(2010) Marta Pola et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations

(2010) Federico Abascal et al.   NUCLEIC ACIDS RESEARCH

Three new solar-powered species of the genus Phyllodesmium Ehrenberg, 1831 (Mollusca: Nudibranchia: Aeolidioidea) from the tropical Indo-Pacific, with analysis of their photosynthetic activity and notes on biology

(2008) Ingo Burghardt et al.   JOURNAL OF MOLLUSCAN STUDIES

Symbiosis between Symbiodinium (Dinophyceae) and various taxa of Nudibranchia (Mollusca: Gastropoda), with analyses of long-term retention

(2008) I BURGHARDT   ORGANISMS DIVERSITY & EVOLUTION