Systematics and biogeography of Oleaceae subtribe Schreberinae, with recircumscription and revision of the Malagasy members

Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family

(2022) Wenpan Dong et al.   BMC BIOLOGY

From the Mediterranean to the Pacific: re-circumscription towards Notelaea s.l. and historical biogeography of a generic complex in Oleinae (Oleaceae)

(2022) Julia Dupin et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Plastid genomes reveal evolutionary shifts in elevational range and flowering time of Osmanthus (Oleaceae)

(2022) Yongfu Li et al.   Ecology and Evolution

Phylogeny of the Madagascar-centred tribe Danaideae (Rubiaceae) as a precursor to taxonomic revision: insights into its generic and species limits, affinities and distribution

(2022) Sylvain G Razafimandimbison et al.   ANNALS OF BOTANY

How ancient forest fragmentation and riparian connectivity generate high levels of genetic diversity in a microendemic Malagasy tree

(2022) Jordi Salmona et al.   MOLECULAR ECOLOGY

Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae)

(2021) Wen‐Pan Dong et al.   Journal of Systematics and Evolution

Microsatellite-assisted identification and comparative population genetics of Malagasy olive species (Noronhia spp., Oleaceae)

(2021) Océane Gorrilliot et al.   Botany Letters

Paternity tests support a diallelic self‐incompatibility system in a wild olive ( Olea europaea subsp. laperrinei , Oleaceae)

(2020) Guillaume Besnard et al.   Ecology and Evolution

New methods to calculate concordance factors for phylogenomic datasets

(2020) Bui Quang Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Revisiting the phylogeny and taxonomy of Osmanthus (Oleaceae) including description of the new genus Chengiodendron

(2020) YONG-FU LI et al.   Phytotaxa

Resolving the Phylogeny of the Olive Family (Oleaceae): Confronting Information from Organellar and Nuclear Genomes

(2020) Julia Dupin et al.   Genes

Phylogenomics using low‐depth whole genome sequencing: A case study with the olive tribe

(2019) Jill K. Olofsson et al.   Molecular Ecology Resources

Characterizing gene tree conflict in plastome-inferred phylogenies

(2019) Joseph F. Walker et al.   PeerJ

Continued Adaptation of C4 Photosynthesis After an Initial Burst of Changes in the Andropogoneae Grasses

(2019) Matheus E Bianconi et al.   SYSTEMATIC BIOLOGY

Constructing a broadly inclusive seed plant phylogeny

(2018) Stephen A. Smith et al.   AMERICAN JOURNAL OF BOTANY

Conceptual and statistical problems with the DEC+J model of founder-event speciation and its comparison with DEC via model selection

(2018) Richard H. Ree et al.   JOURNAL OF BIOGEOGRAPHY

Molecular Phylogeny and Dating of Forsythieae (Oleaceae) Provide Insight into the Miocene History of Eurasian Temperate Shrubs

(2018) Young-Ho Ha et al.   Frontiers in Plant Science

Phylogenetic analysis and evolution of morphological characters in the genus Jasminum L. (Oleaceae) in India

(2018) J. Nirmala Jeyarani et al.   JOURNAL OF GENETICS

The existence and break-up of the Antarctic land bridge as indicated by both amphi-Pacific distributions and tectonics

(2017) Conrad van den Ende et al.   GONDWANA RESEARCH

Island hopping, long-distance dispersal and species radiation in the Western Indian Ocean: historical biogeography of the Coffeeae alliance (Rubiaceae)

(2017) Kent Kainulainen et al.   JOURNAL OF BIOGEOGRAPHY

UFBoot2: Improving the Ultrafast Bootstrap Approximation

(2017) Diep Thi Hoang et al.   MOLECULAR BIOLOGY AND EVOLUTION

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

GeSeq – versatile and accurate annotation of organelle genomes

(2017) Michael Tillich et al.   NUCLEIC ACIDS RESEARCH

The abiotic and biotic drivers of rapid diversification in Andean bellflowers (Campanulaceae)

(2016) Laura P. Lagomarsino et al.   NEW PHYTOLOGIST

Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices

(2016) Olga Chernomor et al.   SYSTEMATIC BIOLOGY

Museomics illuminate the history of an extinct, paleoendemic plant lineage (Hesperelaea, Oleaceae) known from an 1875 collection from Guadalupe Island, Mexico

(2015) Loubab Zedane et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

The biogeographic origin of a radiation of trees in Madagascar: implications for the assembly of a tropical forest biome

(2015) Sarah Federman et al.   BMC EVOLUTIONARY BIOLOGY

A metacalibrated time-tree documents the early rise of flowering plant phylogenetic diversity

(2015) Susana Magallón et al.   NEW PHYTOLOGIST

In or Out-of-Madagascar?—Colonization Patterns for Large-Bodied Diving Beetles (Coleoptera: Dytiscidae)

(2015) Rasa Bukontaite et al.   PLoS One

Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades

(2014) Nicholas J. Matzke   SYSTEMATIC BIOLOGY

Species limits and diversification in the Madagascar olive (Noronhia, Oleaceae)

(2013) Cynthia Hong-Wa et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

A practical guide to molecular dating

(2013) Hervé Sauquet   COMPTES RENDUS PALEVOL

Intricate patterns of phylogenetic relationships in the olive family as inferred from multi-locus plastid and nuclear DNA sequence analyses: A close-up on Chionanthus and Noronhia (Oleaceae)

(2013) Cynthia Hong-Wa et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Imperfect Isolation: Factors and Filters Shaping Madagascar’s Extant Vertebrate Fauna

(2013) Karen E. Samonds et al.   PLoS One

Bayesian Analysis of Biogeography when the Number of Areas is Large

(2013) Michael J. Landis et al.   SYSTEMATIC BIOLOGY

treePL: divergence time estimation using penalized likelihood for large phylogenies

(2012) Stephen A. Smith et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

In and out of Madagascar: Dispersal to Peripheral Islands, Insular Speciation and Diversification of Indian Ocean Daisy Trees (Psiadia, Asteraceae)

(2012) Joeri S. Strijk et al.   PLoS One

Spatial and temporal arrival patterns of Madagascar's vertebrate fauna explained by distance, ocean currents, and ancestor type

(2012) K. E. Samonds et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular phylogenetic reconstruction of Osmanthus Lour. (Oleaceae) and related genera based on three chloroplast intergenic spacers

(2011) Shi-Quan Guo et al.   PLANT SYSTEMATICS AND EVOLUTION

Supporting Red List threat assessments with GeoCAT: geospatial conservation assessment tool

(2011) Steven Bachman et al.   ZooKeys

Multiple colonizations from Madagascar and converged acquisition of dioecy in the Mascarene Dombeyoideae (Malvaceae) as inferred from chloroplast and nuclear DNA sequence analyses

(2010) Timothée Le Péchon et al.   ANNALS OF BOTANY

Mammalian biodiversity on Madagascar controlled by ocean currents

(2010) Jason R. Ali et al.   NATURE

Molecular phylogeny of Osmanthus (Oleaceae) based on non-coding chloroplast and nuclear ribosomal internal transcribed spacer regions

(2010) Wang-Jun YUAN et al.   Journal of Systematics and Evolution

Phylogenetics of Olea (Oleaceae) based on plastid and nuclear ribosomal DNA sequences: Tertiary climatic shifts and lineage differentiation times

(2009) Guillaume Besnard et al.   ANNALS OF BOTANY

Why does the biota of the Madagascar region have such a strong Asiatic flavour?

(2009) Ben H. Warren et al.   CLADISTICS

Gauging the effects of sampling failure in biogeographical analysis

(2009) Alan H. Turner et al.   JOURNAL OF BIOGEOGRAPHY

NEOENDEMISM IN MADAGASCAN SCALY TREE FERNS RESULTS FROM RECENT, COINCIDENT DIVERSIFICATION BURSTS

(2008) Thomas Janssen et al.   EVOLUTION

PATTERNS OF ENDEMISM AND SPECIES RICHNESS IN MALAGASY COPHYLINE FROGS SUPPORT A KEY ROLE OF MOUNTAINOUS AREAS FOR SPECIATION

(2008) Katharina C. Wollenberg et al.   EVOLUTION

Loss of Self‐Incompatibility and Its Evolutionary Consequences

(2008) Boris Igic et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Arabia–Eurasia collision and the forcing of mid-Cenozoic global cooling

(2008) Mark B. Allen et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

Maximum Likelihood Inference of Geographic Range Evolution by Dispersal, Local Extinction, and Cladogenesis

(2008) Richard H. Ree et al.   SYSTEMATIC BIOLOGY