Never ending story? Evolution of SARS-CoV-2 monitored through Gibbs energies of biosynthesis and antigen-receptor binding of Omicron BQ.1, BQ.1.1, XBB and XBB.1 variants

Atom counting method for determining elemental composition of viruses and its applications in biothermodynamics and environmental science

(2022) Marko Popovic   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Strain Wars: Competitive interactions between SARS-CoV-2 strains are explained by Gibbs energy of antigen-receptor binding

(2022) Marko Popovic et al.   Microbial Risk Analysis

Systems analysis shows that thermodynamic physiological and pharmacological fundamentals drive COVID‐19 and response to treatment

(2022) Richard J. Head et al.   Pharmacology Research & Perspectives

Strain wars 2: Binding constants, enthalpies, entropies, Gibbs energies and rates of binding of SARS-CoV-2 variants

(2022) Marko Popovic   VIROLOGY

Strain wars 3: Differences in infectivity and pathogenicity between Delta and Omicron strains of SARS-CoV-2 can be explained by thermodynamic and kinetic parameters of binding and growth

(2022) Marko Popovic   Microbial Risk Analysis

Strain wars 4 - Darwinian evolution through Gibbs’ glasses: Gibbs energies of binding and growth explain evolution of SARS-CoV-2 from Hu-1 to BA.2

(2022) Marko Popovic   VIROLOGY

Thermodynamic analysis of the interactions between human ACE2 and spike RBD of Betacoronaviruses ( SARS‐CoV ‐1 and SARS‐CoV ‐2)

(2022) Agnieszka Rombel‐Bryzek et al.   FEBS Open Bio

Beyond COVID-19: Do biothermodynamic properties allow predicting the future evolution of SARS-CoV-2 variants?

(2022) Marko Popovic   Microbial Risk Analysis

Single virus inductively coupled plasma mass spectroscopy analysis: A comprehensive study

(2021) Claude Degueldre   TALANTA

Database resources of the national center for biotechnology information

(2021) Eric W Sayers et al.   NUCLEIC ACIDS RESEARCH

Coinfection and Interference Phenomena Are the Results of Multiple Thermodynamic Competitive Interactions

(2021) Marko Popovic et al.   Microorganisms

Using thermodynamic equilibrium models to predict the effect of antiviral agents on infectivity: Theoretical application to SARS-CoV-2 and other viruses.

(2021) Paul Gale   Microbial Risk Analysis

Entropy-Based Pandemics Forecasting

(2020) Umberto Lucia et al.   Frontiers in Physics

How virus size and attachment parameters affect the temperature sensitivity of virus binding to host cells: Predictions of a thermodynamic model for arboviruses and HIV

(2020) Paul Gale   Microbial Risk Analysis

COVID‐19 disease causes an energy supply deficit in a patient

(2020) Mustafa Özilgen et al.   INTERNATIONAL JOURNAL OF ENERGY RESEARCH

Thermodynamics of the Interaction between the Spike Protein of Severe Acute Respiratory Syndrome Coronavirus-2 and the Receptor of Human Angiotensin-Converting Enzyme 2. Effects of Possible Ligands

(2020) Cristina García-Iriepa et al.   Journal of Physical Chemistry Letters

Polymerization and editing modes of a high-fidelity DNA polymerase are linked by a well-defined path

(2020) Thomas Dodd et al.   Nature Communications

Ribosome-mediated polymerization of long chain carbon and cyclic amino acids into peptides in vitro

(2020) Joongoo Lee et al.   Nature Communications

The SARS-CoV-2 Spike Glycoprotein Biosynthesis, Structure, Function, and Antigenicity: Implications for the Design of Spike-Based Vaccine Immunogens

(2020) Liangwei Duan et al.   Frontiers in Immunology

The κ-statistics approach to epidemiology

(2020) Giorgio Kaniadakis et al.   Scientific Reports

Why are RNA virus mutation rates so damn high?

(2018) Siobain Duffy   PLOS BIOLOGY

GISAID: Global initiative on sharing all influenza data – from vision to reality

(2017) Yuelong Shu et al.   Eurosurveillance

Insights into Protein–Ligand Interactions: Mechanisms, Models, and Methods

(2016) Xing Du et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Bridging the past and the future of virology: Surface plasmon resonance as a powerful tool to investigate virus/host interactions

(2013) Marco Rusnati et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Replicative DNA Polymerases

(2013) E. Johansson et al.   Cold Spring Harbor Perspectives in Biology

A structural analysis of M protein in coronavirus assembly and morphology

(2010) Benjamin W. Neuman et al.   JOURNAL OF STRUCTURAL BIOLOGY

Light activation of transcription: photocaging of nucleotides for control over RNA polymerization

(2008) A. V. Pinheiro et al.   NUCLEIC ACIDS RESEARCH