Single-cell RNA sequencing identifies a paracrine interaction that may drive oncogenic notch signaling in human adenoid cystic carcinoma

Chordin-Like 1 Regulates Epithelial-to-Mesenchymal Transition and Metastasis via the MAPK Signaling Pathway in Oral Squamous Cell Carcinoma

(2022) Qiuyu Wu et al.   Frontiers in Oncology

Implication of cancer associated fibroblast subtypes on cancer pathogenesis, prognosis, and immunotherapy resistance

(2021) Phillip M Galbo et al.   CLINICAL CANCER RESEARCH

Identification of NTRK3 as a potential prognostic biomarker associated with tumor mutation burden and immune infiltration in bladder cancer

(2021) Zhao Zhang et al.   BMC CANCER

TFAP2A potentiates lung adenocarcinoma metastasis by a novel miR-16 family/TFAP2A/PSG9/TGF-β signaling pathway

(2021) Yanlu Xiong et al.   Cell Death & Disease

Analyses of the pericyte transcriptome in ischemic skeletal muscles

(2021) Yuan-chi Teng et al.   Stem Cell Research & Therapy

Single-cell analysis reveals the pan-cancer invasiveness-associated transition of adipose-derived stromal cells into COL11A1-expressing cancer-associated fibroblasts

(2021) Kaiyi Zhu et al.   PLoS Computational Biology

The Immune Landscape of Chinese Head and Neck Adenoid Cystic Carcinoma and Clinical Implication

(2021) Shengjin Dou et al.   Frontiers in Immunology

Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro

(2021) Luz Garcia-Alonso et al.   NATURE GENETICS

Whole-exome sequencing reveals genetic underpinnings of salivary adenoid cystic carcinoma in Chinese population

(2020) Shuhang Wang et al.   Journal of Genetics and Genomics

Long-term outcomes and clinicogenomic correlates in recurrent, metastatic adenoid cystic carcinoma

(2020) Glenn J. Hanna et al.   ORAL ONCOLOGY

Genetic hallmarks of recurrent/metastatic adenoid cystic carcinoma

(2019) Allen S. Ho et al.   JOURNAL OF CLINICAL INVESTIGATION

1148PACCURACY a phase (P) II trial of AL101, a pan-Notch inhibitor, in recurrent/metastatic (R/M) adenoid cystic carcinoma (ACC) patients (pts) with Notch activating mutations (Notch act mut): Preliminary safety and efficacy data

(2019) R Ferrarotto et al.   ANNALS OF ONCOLOGY

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Unravelling subclonal heterogeneity and aggressive disease states in TNBC through single-cell RNA-seq

(2018) Mihriban Karaayvaz et al.   Nature Communications

Reference component analysis of single-cell transcriptomes elucidates cellular heterogeneity in human colorectal tumors

(2017) Huipeng Li et al.   NATURE GENETICS

Notch Signaling in Development, Tissue Homeostasis, and Disease

(2017) Chris Siebel et al.   PHYSIOLOGICAL REVIEWS

Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer

(2017) Woosung Chung et al.   Nature Communications

Taking it up a NOTCH: anovel subgroup of ACC is identified

(2017) Renata Ferrarotto et al.   Oncotarget

Chordin-Like 1 Suppresses Bone Morphogenetic Protein 4-Induced Breast Cancer Cell Migration and Invasion

(2016) Chanèle Cyr-Depauw et al.   MOLECULAR AND CELLULAR BIOLOGY

An oncogenic MYB feedback loop drives alternate cell fates in adenoid cystic carcinoma

(2016) Yotam Drier et al.   NATURE GENETICS

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

(2016) I. Tirosh et al.   SCIENCE

Adenoid cystic carcinoma: emerging role of translocations and gene fusions

(2016) Piotr T. Wysocki et al.   Oncotarget

Established cell surface markers efficiently isolate highly overlapping populations of skeletal muscle satellite cells by fluorescence-activated cell sorting

(2016) Claire C. Maesner et al.   Skeletal Muscle

Adenoid cystic carcinoma: A review of recent advances, molecular targets, and clinical trials

(2015) Patrick M. Dillon et al.   HEAD AND NECK-JOURNAL FOR THE SCIENCES AND SPECIALTIES OF THE HEAD AND NECK

Recurrent Fusions in MYB and MYBL1 Define a Common, Transcription Factor-Driven Oncogenic Pathway in Salivary Gland Adenoid Cystic Carcinoma

(2015) K. J. Brayer et al.   Cancer Discovery

A unifying gene signature for adenoid cystic cancer identifies parallel MYB-dependent and MYB-independent therapeutic targets

(2015) Ruli Gao et al.   Oncotarget

Full-length RNA-seq from single cells using Smart-seq2

(2014) Simone Picelli et al.   Nature Protocols

Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma

(2014) A. P. Patel et al.   SCIENCE

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

The mutational landscape of adenoid cystic carcinoma

(2013) Allen S Ho et al.   NATURE GENETICS

Smart-seq2 for sensitive full-length transcriptome profiling in single cells

(2013) Simone Picelli et al.   NATURE METHODS

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Oestrogen receptor β in adenoid cystic carcinoma of salivary glands

(2012) Yonara M F S Marques et al.   HISTOPATHOLOGY

Human breast cancer-associated fibroblasts (CAFs) show caveolin-1 down-regulation and RB tumor suppressor functional inactivation: Implications for the response to hormonal therapy

(2010) Isabelle Mercier et al.   CANCER BIOLOGY & THERAPY

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

Recurrent fusion of MYB and NFIB transcription factor genes in carcinomas of the breast and head and neck

(2009) M. Persson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA