Convergent Evolution in SARS-CoV-2 Spike Creates a Variant Soup from Which New COVID-19 Waves Emerge
Published 2023 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Convergent Evolution in SARS-CoV-2 Spike Creates a Variant Soup from Which New COVID-19 Waves Emerge
Authors
Keywords
-
Journal
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 24, Issue 3, Pages 2264
Publisher
MDPI AG
Online
2023-01-24
DOI
10.3390/ijms24032264
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Detection of a SARS-CoV-2 Beta-like variant in coastal Kenya after more than a year of disappearance
- (2023) Arnold W. Lambisia et al. Wellcome Open Research
- R346K Mutation in the Mu Variant of SARS-CoV-2 Alters the Interactions with Monoclonal Antibodies from Class 2: A Free Energy Perturbation Study
- (2022) Filip Fratev Journal of Chemical Information and Modeling
- Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa
- (2022) Raquel Viana et al. NATURE
- Convergent Evolution of Multiple Mutations Improves the Viral Fitness of SARS-CoV-2 Variants by Balancing Positive and Negative Selection
- (2022) Vaibhav Upadhyay et al. BIOCHEMISTRY
- Potent cross-reactive antibodies following Omicron breakthrough in vaccinees
- (2022) Rungtiwa Nutalai et al. CELL
- Evasion of vaccine-induced humoral immunity by emerging sub-variants of SARS-CoV-2
- (2022) Takahiko Koyama et al. Future Microbiology
- The COVID-19 Pandemic Rages on for People Who Are Immunocompromised
- (2022) Rita Rubin JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Omicron: What Makes the Latest SARS-CoV-2 Variant of Concern So Concerning?
- (2022) Christoph Jung et al. JOURNAL OF VIROLOGY
- Cumulative SARS-CoV-2 mutations and corresponding changes in immunity in an immunocompromised patient indicate viral evolution within the host
- (2022) Sissy Therese Sonnleitner et al. Nature Communications
- Structural basis of human ACE2 higher binding affinity to currently circulating Omicron SARS-CoV-2 sub-variants BA.2 and BA.1.1
- (2022) Linjie Li et al. CELL
- Molecular dynamics simulations of the SARS-CoV-2 Spike protein and variants of concern: structural evidence for convergent adaptive evolution
- (2022) Daniel Ferreira de Lima Neto et al. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
- Monoclonal antibody therapies against SARS-CoV-2
- (2022) Daniele Focosi et al. LANCET INFECTIOUS DISEASES
- Drivers of adaptive evolution during chronic SARS-CoV-2 infections
- (2022) Sheri Harari et al. NATURE MEDICINE
- Recombination in Coronaviruses, with a Focus on SARS-CoV-2
- (2022) Daniele Focosi et al. Viruses-Basel
- SARS-CoV-2 shedding dynamics and transmission in immunosuppressed patients
- (2022) Jee-Soo Lee et al. Virulence
- Therapeutic efficacy of monoclonal antibodies and antivirals against SARS-CoV-2 Omicron BA.1 in Syrian hamsters
- (2022) Ryuta Uraki et al. Nature Microbiology
- Recurrent SARS-CoV-2 mutations in immunodeficient patients
- (2022) S A J Wilkinson et al. Virus Evolution
- Emergence of Delta and Omicron variants carrying resistance-associated mutations in immunocompromised patients undergoing sotrovimab treatment with long-term viral excretion
- (2022) Cristina Andrés et al. CLINICAL MICROBIOLOGY AND INFECTION
- SARS-CoV-2 VOCs, Mutational diversity and clinical outcome: Are they modulating drug efficacy by altered binding strength?
- (2022) Sheeba Saifi et al. GENOMICS
- A Critical Analysis of the Use of Cilgavimab plus Tixagevimab Monoclonal Antibody Cocktail (Evusheld™) for COVID-19 Prophylaxis and Treatment
- (2022) Daniele Focosi et al. Viruses-Basel
- Analysis of anti-SARS-CoV-2 Omicron-neutralizing antibody titers in different vaccinated and unvaccinated convalescent plasma sources
- (2022) David J. Sullivan et al. Nature Communications
- Targeted escape of SARS-CoV-2 in vitro from monoclonal antibody S309, the precursor of sotrovimab
- (2022) Clara Luzia Magnus et al. Frontiers in Immunology
- Imprinted SARS-CoV-2 humoral immunity induces convergent Omicron RBD evolution
- (2022) Yunlong Cao et al. NATURE
- Molnupiravir: From Hope to Epic Fail?
- (2022) Daniele Focosi Viruses-Basel
- Do We Really Need Omicron Spike-Based Updated COVID-19 Vaccines? Evidence and Pipeline
- (2022) Daniele Focosi et al. Viruses-Basel
- Immunocompromised Patients with Protracted COVID-19: a Review of “Long Persisters”
- (2022) Veronica Dioverti et al. Current Transplantation Reports
- Potential APOBEC-mediated RNA editing of the genomes of SARS-CoV-2 and other coronaviruses and its impact on their longer term evolution
- (2021) Jeremy Ratcliff et al. VIROLOGY
- SARS-CoV-2 evolution during treatment of chronic infection
- (2021) Steven A. Kemp et al. NATURE
- Mutation rates and selection on synonymous mutations in SARS-CoV-2
- (2021) Nicola De Maio et al. Genome Biology and Evolution
- A human coronavirus evolves antigenically to escape antibody immunity
- (2021) Rachel T. Eguia et al. PLoS Pathogens
- The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages
- (2021) Darren P. Martin et al. CELL
- The monoclonal antibody combination REGEN-COV protects against SARS-CoV-2 mutational escape in preclinical and human studies
- (2021) Richard Copin et al. CELL
- Use of convalescent plasma in COVID ‐19 patients with immunosuppression
- (2021) Jonathon W. Senefeld et al. TRANSFUSION
- Characterization of a Lineage C.36 SARS-CoV-2 Isolate with Reduced Susceptibility to Neutralization Circulating in Lombardy, Italy
- (2021) Matteo Castelli et al. Viruses-Basel
- Genetic and structural basis for SARS-CoV-2 variant neutralization by a two-antibody cocktail
- (2021) Jinhui Dong et al. Nature Microbiology
- The ongoing evolution of variants of concern and interest of SARS-CoV-2 in Brazil revealed by convergent indels in the amino (N)-terminal domain of the spike protein
- (2021) Paola Cristina Resende et al. Virus Evolution
- Prevalence of Immunosuppressive Drug Use Among Commercially Insured US Adults, 2018-2019
- (2021) Beth I. Wallace et al. JAMA Network Open
- CoV-Spectrum: analysis of globally shared SARS-CoV-2 data to identify and characterize new variants
- (2021) Chaoran Chen et al. BIOINFORMATICS
- Genomic surveillance reveals the detection of SARS‐CoV‐2 delta, beta, and gamma VOCs during the third wave in Pakistan
- (2021) Massab Umair et al. JOURNAL OF MEDICAL VIROLOGY
- Prolonged SARS-CoV-2 Infection in Patients with Lymphoid Malignancies
- (2021) Christina Y. Lee et al. Cancer Discovery
- Geographic and Genomic Distribution of SARS-CoV-2 Mutations
- (2020) Daniele Mercatelli et al. Frontiers in Microbiology
- Nextstrain: real-time tracking of pathogen evolution
- (2018) James Hadfield et al. BIOINFORMATICS
- APOBEC3G Contributes to HIV-1 Variation through Sublethal Mutagenesis
- (2010) H. A. Sadler et al. JOURNAL OF VIROLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation