Microbiome ethics, guiding principles for microbiome research, use and knowledge management

Ethical microbiome research with Indigenous communities

(2022) Shani Msafiri Mangola et al.   Nature Microbiology

Expanded catalog of microbial genes and metagenome-assembled genomes from the pig gut microbiome

(2021) Congying Chen et al.   Nature Communications

Microbiome innovations for a sustainable future

(2021) Kathleen D’Hondt et al.   Nature Microbiology

A metabolomics pipeline for the mechanistic interrogation of the gut microbiome

(2021) Shuo Han et al.   NATURE

Calling for a systems approach in microbiome research and innovation

(2021) Annelein Meisner et al.   CURRENT OPINION IN BIOTECHNOLOGY

The Edible Plant Microbiome represents a diverse genetic reservoir with functional potential in the human host

(2021) Maria J. Soto-Giron et al.   Scientific Reports

Precise quantification of bacterial strains after fecal microbiota transplantation delineates long-term engraftment and explains outcomes

(2021) Varun Aggarwala et al.   Nature Microbiology

Influences of Ingredients and Bakers on the Bacteria and Fungi in Sourdough Starters and Bread

(2020) Aspen T. Reese et al.   mSphere

Rights, interests and expectations: Indigenous perspectives on unrestricted access to genomic data

(2020) Maui Hudson et al.   NATURE REVIEWS GENETICS

An ethical investigation into the microbiome: the intersection of agriculture, genetics, and the obesity epidemic

(2020) Hunter Jackson Smith   Gut Microbes

Human postprandial responses to food and potential for precision nutrition

(2020) Sarah E. Berry et al.   NATURE MEDICINE

Plant–microbiome interactions: from community assembly to plant health

(2020) Pankaj Trivedi et al.   NATURE REVIEWS MICROBIOLOGY

Development of Microbiome Biobanks – Challenges and Opportunities

(2020) M.J. Ryan et al.   TRENDS IN MICROBIOLOGY

Gut microbial co-abundance networks show specificity in inflammatory bowel disease and obesity

(2020) Lianmin Chen et al.   Nature Communications

Microbiome definition re-visited: old concepts and new challenges

(2020) Gabriele Berg et al.   Microbiome

Advances in Microbiome Research for Animal Health

(2020) Raquel S. Peixoto et al.   Annual Review of Animal Biosciences

Infusion of donor feces affects the gut–brain axis in humans with metabolic syndrome

(2020) Annick V. Hartstra et al.   Molecular Metabolism

The microbiome, cancer, and cancer therapy

(2019) Beth A. Helmink et al.   NATURE MEDICINE

Soil microbiome: a key player for conservation of soil health under changing climate

(2019) Anamika Dubey et al.   BIODIVERSITY AND CONSERVATION

Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice

(2019) Gil Sharon et al.   CELL

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome

(2019) Víctor J. Carrión et al.   SCIENCE

Gut microbiota regulates maturation of the adult enteric nervous system via enteric serotonin networks

(2018) Filipe De Vadder et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Faecal transplants could help preserve vulnerable species

(2018) Sara Reardon   NATURE

Gut microbiome and type 2 diabetes: where we are and where to go?

(2018) Sapna Sharma et al.   JOURNAL OF NUTRITIONAL BIOCHEMISTRY

The Human Microbiome and Child Growth – First 1000 Days and Beyond

(2018) Ruairi C. Robertson et al.   TRENDS IN MICROBIOLOGY

Where less may be more: how the rare biosphere pulls ecosystems strings

(2017) Alexandre Jousset et al.   ISME Journal

Communicating the promise, risks, and ethics of large-scale, open space microbiome and metagenome research

(2017) Daria Shamarina et al.   Microbiome

Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciences

(2016) Claudia Manzoni et al.   BRIEFINGS IN BIOINFORMATICS

The FAIR Guiding Principles for scientific data management and stewardship

(2016) Mark D. Wilkinson et al.   Scientific Data

Relic DNA is abundant in soil and obscures estimates of soil microbial diversity

(2016) Paul Carini et al.   Nature Microbiology

Ensuring safety in artisanal food microbiology

(2016) Luca Cocolin et al.   Nature Microbiology

Safeguarding human health in the Anthropocene epoch: report of The Rockefeller Foundation–Lancet Commission on planetary health

(2015) Sarah Whitmee et al.   LANCET

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

(2013) V. K. Ridaura et al.   SCIENCE