Comparative analysis of bacterial diversity in the rhizosphere of tomato by culture-dependent and -independent approaches
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Comparative analysis of bacterial diversity in the rhizosphere of tomato by culture-dependent and -independent approaches
Authors
Keywords
tomato rhizosphere, bacteria, diversity, culture collection, antibiotics
Journal
JOURNAL OF MICROBIOLOGY
Volume 54, Issue 12, Pages 823-831
Publisher
Springer Nature
Online
2016-11-25
DOI
10.1007/s12275-016-6410-3
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The Rebirth of Culture in Microbiology through the Example of Culturomics To Study Human Gut Microbiota
- (2015) Jean-Christophe Lagier et al. CLINICAL MICROBIOLOGY REVIEWS
- Analyses of Intestinal Microbiota: Culture versus Sequencing: Figure 1
- (2015) Andreas Hiergeist et al. ILAR JOURNAL
- Functional overlap of the Arabidopsis leaf and root microbiota
- (2015) Yang Bai et al. NATURE
- Ecology and exploration of the rare biosphere
- (2015) Michael D. J. Lynch et al. NATURE REVIEWS MICROBIOLOGY
- Compact graphical representation of phylogenetic data and metadata with GraPhlAn
- (2015) Francesco Asnicar et al. PeerJ
- Reclassification of rhizosphere bacteria including strains causing corky root of lettuce and proposal of Rhizorhapis suberifaciens gen. nov., comb. nov., Sphingobium mellinum sp. nov., Sphingobium xanthum sp. nov. and Rhizorhabdus argentea gen. nov., sp. nov.
- (2014) I. M. Francis et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Effect of long-term different fertilization on bacterial community structures and diversity in citrus orchard soil of volcanic ash
- (2014) Jae Ho Joa et al. JOURNAL OF MICROBIOLOGY
- Cultivation-based multiplex phenotyping of human gut microbiota allows targeted recovery of previously uncultured bacteria
- (2014) Elizabeth A. Rettedal et al. Nature Communications
- Structure and Functions of the Bacterial Microbiota of Plants
- (2013) Davide Bulgarelli et al. Annual Review of Plant Biology
- UPARSE: highly accurate OTU sequences from microbial amplicon reads
- (2013) Robert C Edgar NATURE METHODS
- Ribosomal Database Project: data and tools for high throughput rRNA analysis
- (2013) James R. Cole et al. NUCLEIC ACIDS RESEARCH
- Dynamics of the bacterial community structure in the rhizosphere of a maize cultivar
- (2013) Xiangzhen Li et al. SOIL BIOLOGY & BIOCHEMISTRY
- SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
- (2012) Elmar Pruesse et al. BIOINFORMATICS
- Microbial culturomics: paradigm shift in the human gut microbiome study
- (2012) J.-C. Lagier et al. CLINICAL MICROBIOLOGY AND INFECTION
- Culturing captures members of the soil rare biosphere
- (2012) Ashley Shade et al. ENVIRONMENTAL MICROBIOLOGY
- Sphingomonas ginsengisoli sp. nov. and Sphingomonas sediminicola sp. nov.
- (2012) D.-S. An et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Next-generation sequencing technologies for environmental DNA research
- (2012) SHADI SHOKRALLA et al. MOLECULAR ECOLOGY
- Defining the core Arabidopsis thaliana root microbiome
- (2012) Derek S. Lundberg et al. NATURE
- Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
- (2012) Davide Bulgarelli et al. NATURE
- Cultivation of unculturable soil bacteria
- (2012) Van H.T. Pham et al. TRENDS IN BIOTECHNOLOGY
- The rhizosphere microbiome and plant health
- (2012) Roeland L. Berendsen et al. TRENDS IN PLANT SCIENCE
- The Rare Bacterial Biosphere
- (2011) Carlos Pedrós-Alió Annual Review of Marine Science
- Microbial Characteristics of a Submerged Karst Cave System in Northern Florida
- (2011) Joseph A. Moss et al. GEOMICROBIOLOGY JOURNAL
- Sphingobium wenxiniae sp. nov., a synthetic pyrethroid (SP)-degrading bacterium isolated from activated sludge in an SP-manufacturing wastewater treatment facility
- (2010) B.-Z. Wang et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Plant-Growth-Promoting Rhizobacteria
- (2009) Ben Lugtenberg et al. Annual Review of Microbiology
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Exploration of hitherto-uncultured bacteria from the rhizosphere
- (2009) Ulisses Nunes da Rocha et al. FEMS MICROBIOLOGY ECOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More