Mapping species diversification metrics in macroecology: Prospects and challenges
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Mapping species diversification metrics in macroecology: Prospects and challenges
Authors
Keywords
-
Journal
Frontiers in Ecology and Evolution
Volume 10, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2022-09-28
DOI
10.3389/fevo.2022.951271
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Studying speciation and extinction dynamics from phylogenies: addressing identifiability issues
- (2022) Hélène Morlon et al. TRENDS IN ECOLOGY & EVOLUTION
- Evolutionary time best explains the latitudinal diversity gradient of living freshwater fish diversity
- (2021) Elizabeth Christina Miller et al. GLOBAL ECOLOGY AND BIOGEOGRAPHY
- Ecological Opportunity from Innovation, not Islands, Drove the Anole Lizard Adaptive Radiation
- (2021) Edward D Burress et al. SYSTEMATIC BIOLOGY
- Amphibian Speciation Rates Support a General Role of Mountains as Biodiversity Pumps
- (2021) Adrián García-Rodríguez et al. AMERICAN NATURALIST
- gen3sis: A general engine for eco-evolutionary simulations of the processes that shape Earth’s biodiversity
- (2021) Oskar Hagen et al. PLOS BIOLOGY
- Genetic and Ecogeographic Controls on Species Cohesion in Australia’s Most Diverse Lizard Radiation
- (2021) Ivan Prates et al. AMERICAN NATURALIST
- When adaptive radiations collide: Different evolutionary trajectories between and within island and mainland lizard clades
- (2021) Austin H. Patton et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Extant timetrees are consistent with a myriad of diversification histories
- (2020) Stilianos Louca et al. NATURE
- The Dynamics of Bird Diversity in the New World
- (2020) Antonin Machac SYSTEMATIC BIOLOGY
- Testing Darwin’s naturalization conundrum based on taxonomic, phylogenetic, and functional dimensions of vascular plants
- (2020) Jesús N. Pinto‐Ledezma et al. ECOLOGICAL MONOGRAPHS
- Effects of evolutionary time, speciation rates and local abiotic conditions on the origin and maintenance of amphibian montane diversity
- (2020) Adrián García‐Rodríguez et al. GLOBAL ECOLOGY AND BIOGEOGRAPHY
- Solitary ecology as a phenomenon extending beyond insular systems: exaptive evolution in Anolis lizards
- (2019) Julián A. Velasco et al. Biology Letters
- Assessing the causes of diversification slowdowns: temperature‐dependent and diversity‐dependent models receive equivalent support
- (2019) Fabien L. Condamine et al. ECOLOGY LETTERS
- Comparative Evolution of an Archetypal Adaptive Radiation: Innovation and Opportunity in Anolis Lizards
- (2018) Steven Poe et al. AMERICAN NATURALIST
- Climatic and evolutionary factors shaping geographical gradients of species richness in Anolis lizards
- (2018) Julian A Velasco et al. BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY
- Phylogenetic scale in ecology and evolution
- (2018) Catherine H. Graham et al. GLOBAL ECOLOGY AND BIOGEOGRAPHY
- Modeling the ecology and evolution of biodiversity: Biogeographical cradles, museums, and graves
- (2018) Thiago F. Rangel et al. SCIENCE
- Hidden state models improve state-dependent diversification approaches, including biogeographical models
- (2018) Daniel S. Caetano et al. EVOLUTION
- An inverse latitudinal gradient in speciation rate for marine fishes
- (2018) Daniel L. Rabosky et al. NATURE
- What affects power to estimate speciation rate shifts?
- (2018) Ullasa Kodandaramaiah et al. PeerJ
- Drivers of Phylogenetic Assemblage Structure of the Furnariides, a Widespread Clade of Lowland Neotropical Birds
- (2018) Jesús N. Pinto-Ledezma et al. AMERICAN NATURALIST
- The Latitudinal Diversity Gradient: Novel Understanding through Mechanistic Eco-evolutionary Models
- (2018) Mikael Pontarp et al. TRENDS IN ECOLOGY & EVOLUTION
- FiSSE: A simple nonparametric test for the effects of a binary character on lineage diversification rates
- (2017) Daniel L. Rabosky et al. EVOLUTION
- Structural bias in aggregated species-level variables driven by repeated species co-occurrences: a pervasive problem in community and assemblage data
- (2017) Bradford A. Hawkins et al. JOURNAL OF BIOGEOGRAPHY
- brms: An R Package for Bayesian Multilevel Models Using Stan
- (2017) Paul-Christian Bürkner Journal of Statistical Software
- Stan: A Probabilistic Programming Language
- (2017) Bob Carpenter et al. Journal of Statistical Software
- Recent origin and rapid speciation of Neotropical orchids in the world's richest plant biodiversity hotspot
- (2017) Oscar Alejandro Pérez-Escobar et al. NEW PHYTOLOGIST
- Accelerated body size evolution during cold climatic periods in the Cenozoic
- (2017) Julien Clavel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Phylogenetic, Biogeographic, and Taxonomic study of all Extant Species of Anolis (Squamata; Iguanidae)
- (2017) Steven Poe et al. SYSTEMATIC BIOLOGY
- Detecting Environment-Dependent Diversification From Phylogenies: A Simulation Study and Some Empirical Illustrations
- (2017) Eric Lewitus et al. SYSTEMATIC BIOLOGY
- Five palaeobiological laws needed to understand the evolution of the living biota
- (2017) Charles R. Marshall Nature Ecology & Evolution
- A guide to phylogenetic metrics for conservation, community ecology and macroecology
- (2016) Caroline M. Tucker et al. BIOLOGICAL REVIEWS
- Phylogenetic community structure metrics and null models: a review with new methods and software
- (2016) Eliot T. Miller et al. ECOGRAPHY
- Mechanistic simulation models in macroecology and biogeography: state-of-art and prospects
- (2016) Juliano Sarmento Cabral et al. ECOGRAPHY
- Extinction as a driver of avian latitudinal diversity gradients
- (2016) Paola Pulido-Santacruz et al. EVOLUTION
- Ephemeral ecological speciation and the latitudinal biodiversity gradient
- (2016) Asher D. Cutter et al. EVOLUTION
- Does the colonization of new biogeographic regions influence the diversification and accumulation of clade richness among the Corvides (Aves: Passeriformes)?
- (2016) Jonathan D. Kennedy et al. EVOLUTION
- The geographical diversification of Furnariides: the role of forest versus open habitats in driving species richness gradients
- (2016) Jesús N. Pinto-Ledezma et al. JOURNAL OF BIOGEOGRAPHY
- Bayesian estimation of the global biogeographical history of the Solanaceae
- (2016) Julia Dupin et al. JOURNAL OF BIOGEOGRAPHY
- Into the Andes: multiple independent colonizations drive montane diversity in the Neotropical clearwing butterflies Godyridina
- (2016) Nicolas Chazot et al. MOLECULAR ECOLOGY
- Into and out of the tropics: global diversification patterns in a hyperdiverse clade of ectomycorrhizal fungi
- (2016) Brian P. Looney et al. MOLECULAR ECOLOGY
- Macroecology of biodiversity: disentangling local and regional effects
- (2016) Meelis Pärtel et al. NEW PHYTOLOGIST
- Fossil biogeography: a new model to infer dispersal, extinction and sampling from palaeontological data
- (2016) Daniele Silvestro et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The uncertain role of diversity dependence in species diversification and the need to incorporate time-varying carrying capacities
- (2016) Charles R. Marshall et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Detecting Hidden Diversification Shifts in Models of Trait-Dependent Speciation and Extinction
- (2016) Jeremy M. Beaulieu et al. SYSTEMATIC BIOLOGY
- Extinction in Phylogenetics and Biogeography: From Timetrees to Patterns of Biotic Assemblage
- (2016) Isabel Sanmartín et al. Frontiers in Genetics
- Phylogenetic niche conservatism explains an inverse latitudinal diversity gradient in freshwater arthropods
- (2016) Jérôme Morinière et al. Scientific Reports
- Species Richness at Continental Scales Is Dominated by Ecological Limits
- (2015) Daniel L. Rabosky et al. AMERICAN NATURALIST
- Species Diversity Is Dynamic and Unbounded at Local and Continental Scales
- (2015) Luke J. Harmon et al. AMERICAN NATURALIST
- Phylogenetic analysis in Myrcia section Aulomyrcia and inferences on plant diversity in the Atlantic rainforest
- (2015) Vanessa Graziele Staggemeier et al. ANNALS OF BOTANY
- Ecological and Evolutionary Drivers of Geographic Variation in Species Diversity
- (2015) Paul V.A. Fine Annual Review of Ecology Evolution and Systematics
- Equilibrium and non-equilibrium dynamics simultaneously operate in the Galápagos islands
- (2015) Luis M. Valente et al. ECOLOGY LETTERS
- Challenges in the estimation of extinction from molecular phylogenies: A response to Beaulieu and O'Meara
- (2015) Daniel L. Rabosky EVOLUTION
- High speciation rate at temperate latitudes explains unusual diversity gradients in a clade of ectomycorrhizal fungi
- (2015) Santiago Sánchez-Ramírez et al. EVOLUTION
- Extinction can be estimated from moderately sized molecular phylogenies
- (2015) Jeremy M. Beaulieu et al. EVOLUTION
- Body sizes and diversification rates of lizards, snakes, amphisbaenians and the tuatara
- (2015) Anat Feldman et al. GLOBAL ECOLOGY AND BIOGEOGRAPHY
- Model Inadequacy and Mistaken Inferences of Trait-Dependent Speciation
- (2015) Daniel L. Rabosky et al. SYSTEMATIC BIOLOGY
- An engine for global plant diversity: highest evolutionary turnover and emigration in the American tropics
- (2015) Alexandre Antonelli et al. Frontiers in Genetics
- Evolutionary and ecological causes of species richness patterns in North American angiosperm trees
- (2014) Hong Qian et al. ECOGRAPHY
- Phylogenetic approaches for studying diversification
- (2014) Hélène Morlon ECOLOGY LETTERS
- Into and out of the tropics: the generation of the latitudinal gradient among New World passerine birds
- (2014) Jonathan D. Kennedy et al. JOURNAL OF BIOGEOGRAPHY
- Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees
- (2014) Daniel L. Rabosky PLoS One
- Bayesian Estimation of Speciation and Extinction from Incomplete Fossil Occurrence Data
- (2014) Daniele Silvestro et al. SYSTEMATIC BIOLOGY
- Biogeographic Analysis Reveals Ancient Continental Vicariance and Recent Oceanic Dispersal in Amphibians
- (2014) R. Alexander Pyron SYSTEMATIC BIOLOGY
- Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades
- (2014) Nicholas J. Matzke SYSTEMATIC BIOLOGY
- Ecological opportunity and the adaptive diversification of lineages
- (2014) Gary A. Wellborn et al. Ecology and Evolution
- Faster Speciation and Reduced Extinction in the Tropics Contribute to the Mammalian Latitudinal Diversity Gradient
- (2014) Jonathan Rolland et al. PLOS BIOLOGY
- Macroevolutionary perspectives to environmental change
- (2013) Fabien L. Condamine et al. ECOLOGY LETTERS
- Neotropical diversification seen through glassfrogs
- (2013) Santiago Castroviejo-Fisher et al. JOURNAL OF BIOGEOGRAPHY
- Why are there so many species in the tropics?
- (2013) James H. Brown JOURNAL OF BIOGEOGRAPHY
- Recovering speciation and extinction dynamics based on phylogenies
- (2013) T. Stadler JOURNAL OF EVOLUTIONARY BIOLOGY
- Bayesian Analysis of Biogeography when the Number of Areas is Large
- (2013) Michael J. Landis et al. SYSTEMATIC BIOLOGY
- Diversity in time and space: wanted dead and alive
- (2013) Susanne A. Fritz et al. TRENDS IN ECOLOGY & EVOLUTION
- Dispersal and niche evolution jointly shape the geographic turnover of phylogenetic clades across continents
- (2013) Wolf L. Eiserhardt et al. Scientific Reports
- Is regional species diversity bounded or unbounded?
- (2012) Howard V. Cornell BIOLOGICAL REVIEWS
- TEMPO AND MODE IN PLANT BREEDING SYSTEM EVOLUTION
- (2012) Emma E. Goldberg et al. EVOLUTION
- Global patterns of amphibian phylogenetic diversity
- (2012) Susanne A. Fritz et al. JOURNAL OF BIOGEOGRAPHY
- The global diversity of birds in space and time
- (2012) W. Jetz et al. NATURE
- Different evolutionary histories underlie congruent species richness gradients of birds and mammals
- (2011) Bradford A. Hawkins et al. JOURNAL OF BIOGEOGRAPHY
- Phylogenetic diversity as a window into the evolutionary and biogeographic histories of present-day richness gradients for mammals
- (2011) T. J. Davies et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Diversity-dependence brings molecular phylogenies closer to agreement with the fossil record
- (2011) R. S. Etienne et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The Causes Of Species Richness Patterns Across Space, Time, And Clades And The Role Of “Ecological Limits”
- (2011) John J. Wiens QUARTERLY REVIEW OF BIOLOGY
- Phylogenetic Inference of Reciprocal Effects between Geographic Range Evolution and Diversification
- (2011) Emma E. Goldberg et al. SYSTEMATIC BIOLOGY
- Mass Extinction, Gradual Cooling, or Rapid Radiation? Reconstructing the Spatiotemporal Evolution of the Ancient Angiosperm Genus Hedyosmum (Chloranthaceae) Using Empirical and Simulated Approaches
- (2011) Alexandre Antonelli et al. SYSTEMATIC BIOLOGY
- Testing the time-for-speciation effect in the assembly of regional biotas
- (2011) Daniel L. Rabosky Methods in Ecology and Evolution
- Picante: R tools for integrating phylogenies and ecology
- (2010) S. W. Kembel et al. BIOINFORMATICS
- Bayesian island biogeography in a continental setting: the Rand Flora case
- (2010) I. Sanmartin et al. Biology Letters
- Diversity dynamics: molecular phylogenies need the fossil record
- (2010) Tiago B. Quental et al. TRENDS IN ECOLOGY & EVOLUTION
- Inferring the Dynamics of Diversification: A Coalescent Approach
- (2010) Hélène Morlon et al. PLOS BIOLOGY
- Ecological limits and diversification rate: alternative paradigms to explain the variation in species richness among clades and regions
- (2009) Daniel L. Rabosky ECOLOGY LETTERS
- EXTINCTION RATES SHOULD NOT BE ESTIMATED FROM MOLECULAR PHYLOGENIES
- (2009) Daniel L. Rabosky EVOLUTION
- A World Malaria Map: Plasmodium falciparum Endemicity in 2007
- (2009) Simon I Hay et al. PLOS MEDICINE
- Relating Traits to Diversification: A Simple Test
- (2008) Robert P. Freckleton et al. AMERICAN NATURALIST
- The Ecological Dynamics of Clade Diversification and Community Assembly
- (2008) Mark A. McPeek AMERICAN NATURALIST
- Tree thinking for all biology: the problem with reading phylogenies as ladders of progress
- (2008) Kevin E. Omland et al. BIOESSAYS
- The reality and importance of founder speciation in evolution
- (2008) Alan R. Templeton BIOESSAYS
- Evolutionary constraints on regional faunas: whom, but not how many
- (2008) Adam C. Algar et al. ECOLOGY LETTERS
- Inferring dispersal: a Bayesian approach to phylogeny-based island biogeography, with special reference to the Canary Islands
- (2008) Isabel Sanmartín et al. JOURNAL OF BIOGEOGRAPHY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now