Dietary Isoflavones Alter Gut Microbiota and Lipopolysaccharide Biosynthesis to Reduce Inflammation

Modulation of inflammatory responses by gastrointestinal Prevotella spp. – From associations to functional studies

(2021) Aida Iljazovic et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

(2021) Francesco Beghini et al.   eLife

Isoflavone diet ameliorates experimental autoimmune encephalomyelitis through modulation of gut bacteria depleted in patients with multiple sclerosis

(2021) Samantha N. Jensen et al.   Science Advances

The carbohydrate-active enzyme database: functions and literature

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Isolation and culture of murine bone marrow-derived macrophages for nitric oxide and redox biology

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Lactobacillus intestinalis efficiently produces equol from daidzein and chungkookjang, short-term fermented soybeans

(2019) Yuan Heng et al.   ARCHIVES OF MICROBIOLOGY

Exopolysaccharide-Producing Bifidobacterium adolescentis Strains with Similar Adhesion Property Induce Differential Regulation of Inflammatory Immune Response in Treg/Th17 Axis of DSS-Colitis Mice

(2019) Rui Yu et al.   Nutrients

LC-ESI-MS/MS method for the simultaneous determination of isoformononetin, daidzein, and equol in rat plasma: Application to a preclinical pharmacokinetic study

(2019) Kanumuri Siva Rama Raju et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Diet-Microbe-Host Interactions That Affect Gut Mucosal Integrity and Infection Resistance

(2019) Andrew J. Forgie et al.   Frontiers in Immunology

Food Components and Dietary Habits: Keys for a Healthy Gut Microbiota Composition

(2019) Rinninella et al.   Nutrients

Equol: A Bacterial Metabolite from The Daidzein Isoflavone and Its Presumed Beneficial Health Effects

(2019) Baltasar Mayo et al.   Nutrients

Daidzein reductase of Eggerthella sp. YY7918, its octameric subunit structure containing FMN/FAD/4Fe-4S, and its enantioselective production of R -dihydroisoflavones

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dbCAN2: a meta server for automated carbohydrate-active enzyme annotation

(2018) Han Zhang et al.   NUCLEIC ACIDS RESEARCH

MUMmer4: A fast and versatile genome alignment system

(2018) Guillaume Marçais et al.   PLoS Computational Biology

Environment dominates over host genetics in shaping human gut microbiota

(2018) Daphna Rothschild et al.   NATURE

Genistein induces macrophage polarization and systemic cytokine to ameliorate experimental colitis

(2018) Jessicca D. Abron et al.   PLoS One

MetaWRAP—a flexible pipeline for genome-resolved metagenomic data analysis

(2018) Gherman V. Uritskiy et al.   Microbiome

Kineothrix alysoides, gen. nov., sp. nov., a saccharolytic butyrate-producer within the family Lachnospiraceae

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Gut microbiota lipopolysaccharide accelerates inflamm-aging in mice

(2016) Kyung-Ah Kim et al.   BMC MICROBIOLOGY

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans

(2016) Tommi Vatanen et al.   CELL

proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes

(2016) Daniel R. Mende et al.   NUCLEIC ACIDS RESEARCH

Fast and sensitive taxonomic classification for metagenomics with Kaiju

(2016) Peter Menzel et al.   Nature Communications

Alterations of the human gut microbiome in multiple sclerosis

(2016) Sushrut Jangi et al.   Nature Communications

Multiple sclerosis patients have a distinct gut microbiota compared to healthy controls

(2016) Jun Chen et al.   Scientific Reports

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

The gut microbiome in health and in disease

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Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Diversity, ecology and intestinal function of bifidobacteria

(2014) Francesca Bottacini et al.   Microbial Cell Factories

Identification and Expression of Genes Involved in the Conversion of Daidzein and Genistein by the Equol-Forming Bacterium Slackia isoflavoniconvertens

(2013) Christine Schröder et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

CD8+ T Cells Are Required For Glatiramer Acetate Therapy in Autoimmune Demyelinating Disease

(2013) Andrew F. Tyler et al.   PLoS One

The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic Treg Cell Homeostasis

(2013) P. M. Smith et al.   SCIENCE

Environmental factors and their regulation of immunity in multiple sclerosis

(2012) Marcus W. Koch et al.   JOURNAL OF THE NEUROLOGICAL SCIENCES

Bioconversion of daidzein to equol by Bifidobacterium breve 15700 and Bifidobacterium longum BB536

(2012) Salma Elghali et al.   Journal of Functional Foods

EAE: imperfect but useful models of multiple sclerosis

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Prevalence of the Equol-Producer Phenotype and Its Relationship with Dietary Isoflavone and Serum Lipids in Healthy Chinese Adults

(2010) Baohua Liu et al.   JOURNAL OF EPIDEMIOLOGY

Diet, gut microbiota and immune responses

(2010) Kendle M Maslowski et al.   NATURE IMMUNOLOGY

Stereospecific Biotransformation of Dihydrodaidzein into (3S)-Equol by the Human Intestinal Bacterium Eggerthella Strain Julong 732

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Isolation of a Human Intestinal Bacterium Capable of Daidzein and Genistein Conversion

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Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice

(2009) Chenhong Zhang et al.   ISME Journal

Polyphenol metabolites from colonic microbiota exert anti-inflammatory activity on different inflammation models

(2009) Mar Larrosa et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Isolation and Characterization of a Novel Equol-Producing Bacterium from Human Feces

(2008) Shin-ichiro YOKOYAMA et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Concordance and heritability of multiple sclerosis in Finland: study on a nationwide series of twins

(2008) H. Kuusisto et al.   EUROPEAN JOURNAL OF NEUROLOGY

Adlercreutzia equolifaciens gen. nov., sp. nov., an equol-producing bacterium isolated from human faeces, and emended description of the genus Eggerthella

(2008) T. Maruo et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Bowman−Birk Inhibitor and Genistein among Soy Compounds That Synergistically Inhibit Nitric Oxide and Prostaglandin E2Pathways in Lipopolysaccharide-Induced Macrophages

(2008) Vermont P. Dia et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Dietary isoflavones in the prevention of cardiovascular disease – A molecular perspective

(2007) Gerald Rimbach et al.   FOOD AND CHEMICAL TOXICOLOGY