Experimental evolution reveals the synergistic genomic mechanisms of adaptation to ocean warming and acidification in a marine copepod
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Experimental evolution reveals the synergistic genomic mechanisms of adaptation to ocean warming and acidification in a marine copepod
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 119, Issue 38, Pages -
Publisher
Proceedings of the National Academy of Sciences
Online
2022-09-13
DOI
10.1073/pnas.2201521119
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Loss of transcriptional plasticity but sustained adaptive capacity after adaptation to global change conditions in a marine copepod
- (2022) Reid S. Brennan et al. Nature Communications
- Rapid evolution generates synergism between multiple stressors: Linking theory and an evolution experiment
- (2021) James A. Orr et al. GLOBAL CHANGE BIOLOGY
- Selection Experiments in the Sea: What Can Experimental Evolution Tell Us About How Marine Life Will Respond to Climate Change?
- (2021) Morgan W. Kelly et al. BIOLOGICAL BULLETIN
- Global patterns in copepod thermal tolerance
- (2021) Matthew Sasaki et al. JOURNAL OF PLANKTON RESEARCH
- Rapid, but limited, zooplankton adaptation to simultaneous warming and acidification
- (2021) Hans G. Dam et al. Nature Climate Change
- The Importance of Genetic Redundancy in Evolution
- (2020) Áki J. Láruson et al. TRENDS IN ECOLOGY & EVOLUTION
- Phylogeography of Acartia tonsa Dana, 1849 (Calanoida: Copepoda) and phylogenetic reconstruction of the genus Acartia Dana, 1846
- (2020) Nicole J. Figueroa et al. Marine Biodiversity
- Polygenic adaptation: a unifying framework to understand positive selection
- (2020) Neda Barghi et al. NATURE REVIEWS GENETICS
- Estimating the genome-wide contribution of selection to temporal allele frequency change
- (2020) Vince Buffalo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolutionary origins of genomic adaptations in an invasive copepod
- (2020) David Ben Stern et al. Nature Ecology & Evolution
- Meta‐analysis of multiple driver effects on marine phytoplankton highlights modulating role of p CO 2
- (2020) Miriam Seifert et al. GLOBAL CHANGE BIOLOGY
- Variation in Thermal Tolerance and Its Relationship to Mitochondrial Function Across Populations of Tigriopus californicus
- (2019) Alice E. Harada et al. Frontiers in Physiology
- Polygenic adaptation: From sweeps to subtle frequency shifts
- (2019) Ilse Höllinger et al. PLoS Genetics
- Genetic redundancy fuels polygenic adaptation in Drosophila
- (2019) Neda Barghi et al. PLOS BIOLOGY
- The genome and mRNA transcriptome of the cosmopolitan calanoid copepod Acartia tonsa Dana improve the understanding of copepod genome size evolution
- (2019) Tue Sparholt Jørgensen et al. Genome Biology and Evolution
- Acclimation and adaptation of the coastal calanoid copepod Acartia tonsa to ocean acidification: a long-term laboratory investigation
- (2019) JAF Langer et al. MARINE ECOLOGY PROGRESS SERIES
- Rare genetic variation and balanced polymorphisms are important for survival in global change conditions
- (2019) Reid S. Brennan et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Contrasting genomic shifts underlie parallel phenotypic evolution in response to fishing
- (2019) Nina O. Therkildsen et al. SCIENCE
- An integrative genomic analysis of the Longshanks selection experiment for longer limbs in mice
- (2019) João PL Castro et al. eLife
- The Linked Selection Signature of Rapid Adaptation in Temporal Genomic Data
- (2019) Vince Buffalo et al. GENETICS
- The DEAD-box RNA helicase Ddx39ab is essential for myocyte and lens development in zebrafish
- (2018) Linlin Zhang et al. DEVELOPMENT
- Experimental strategies to assess the biological ramifications of multiple drivers of global ocean change-A review
- (2018) Philip W. Boyd et al. GLOBAL CHANGE BIOLOGY
- Reproductive isolation and morphological divergence between cryptic lineages of the copepod Acartia tonsa in Chesapeake Bay
- (2018) LV Plough et al. MARINE ECOLOGY PROGRESS SERIES
- Multiple modes of adaptation: regulatory and structural evolution in a small heat shock protein gene
- (2018) Sumaetee Tangwancharoen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Reproductive isolation and morphological divergence between cryptic lineages of the copepod Acartia tonsa in Chesapeake Bay
- (2018) LV Plough et al. MARINE ECOLOGY PROGRESS SERIES
- Hurricane-induced selection on the morphology of an island lizard
- (2018) Colin M. Donihue et al. NATURE
- Pervasive Linked Selection and Intermediate-Frequency Alleles Are Implicated in an Evolve-and-Resequencing Experiment of Drosophila simulans
- (2018) John K. Kelly et al. GENETICS
- Quantifying Metabolically Driven pH and Oxygen Fluctuations in US Nearshore Habitats at Diel to Interannual Time Scales
- (2017) Hannes Baumann et al. Estuaries and Coasts
- Quantifying Selection with Pool-Seq Time Series Data
- (2017) Thomas Taus et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evolutionary consequences of multidriver environmental change in an aquatic primary producer
- (2017) Georgina L. Brennan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Winter storms drive rapid phenotypic, regulatory, and genomic shifts in the green anole lizard
- (2017) Shane C. Campbell-Staton et al. SCIENCE
- Multiple Stressors in a Changing World: The Need for an Improved Perspective on Physiological Responses to the Dynamic Marine Environment
- (2016) Alex R. Gunderson et al. Annual Review of Marine Science
- Adaptation to heat stress reduces phenotypic and transcriptional plasticity in a marine copepod
- (2016) Morgan W. Kelly et al. FUNCTIONAL ECOLOGY
- Estimating the Effective Population Size from Temporal Allele Frequency Changes in Experimental Evolution
- (2016) A. Jonas et al. GENETICS
- Can Population Genetics Adapt to Rapid Evolution?
- (2016) Philipp W. Messer et al. TRENDS IN GENETICS
- Selection on oxidative phosphorylation and ribosomal structure as a multigenerational response to ocean acidification in the common copepodPseudocalanus acuspes
- (2015) Pierre De Wit et al. Evolutionary Applications
- Transgenerational effects alleviate severe fecundity loss during ocean acidification in a ubiquitous planktonic copepod
- (2015) Peter Thor et al. GLOBAL CHANGE BIOLOGY
- The effects of temperature on aerobic metabolism: towards a mechanistic understanding of the responses of ectotherms to a changing environment
- (2015) P. M. Schulte JOURNAL OF EXPERIMENTAL BIOLOGY
- Fitting Linear Mixed-Effects Models Usinglme4
- (2015) Douglas Bates et al. Journal of Statistical Software
- Efficient Test and Visualization of Multi-Set Intersections
- (2015) Minghui Wang et al. Scientific Reports
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Selection for complex traits leaves little or no classic signatures of selection
- (2014) Kathryn E Kemper et al. BMC GENOMICS
- Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation
- (2014) C Schlötterer et al. HEREDITY
- Forensic genomics as a novel tool for identifying the causes of mass mortality events
- (2014) Pierre De Wit et al. Nature Communications
- Genome-wide evolutionary response to a heat wave in Drosophila
- (2013) F. Rodriguez-Trelles et al. Biology Letters
- A Guide for the Design of Evolve and Resequencing Studies
- (2013) Robert Kofler et al. MOLECULAR BIOLOGY AND EVOLUTION
- Massive Habitat-Specific Genomic Response in D. melanogaster Populations during Experimental Evolution in Hot and Cold Environments
- (2013) Ray Tobler et al. MOLECULAR BIOLOGY AND EVOLUTION
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- Meta-analysis reveals complex marine biological responses to the interactive effects of ocean acidification and warming
- (2013) Ben P. Harvey et al. Ecology and Evolution
- VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- (2012) D. C. Koboldt et al. GENOME RESEARCH
- LDx: Estimation of Linkage Disequilibrium from High-Throughput Pooled Resequencing Data
- (2012) Alison F. Feder et al. PLoS One
- MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
- (2012) Fredrik Ronquist et al. SYSTEMATIC BIOLOGY
- PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)
- (2011) R. Kofler et al. BIOINFORMATICS
- PUMPING IONS: RAPID PARALLEL EVOLUTION OF IONIC REGULATION FOLLOWING HABITAT INVASIONS
- (2011) Carol Eunmi Lee et al. EVOLUTION
- Cryptic diversity and comparative phylogeography of the estuarine copepod Acartia tonsa on the US Atlantic coast
- (2011) GANG CHEN et al. MOLECULAR ECOLOGY
- PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals
- (2011) Robert Kofler et al. PLoS One
- Limited potential for adaptation to climate change in a broadly distributed marine crustacean
- (2011) M. W. Kelly et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Population-Based Resequencing of Experimentally Evolved Populations Reveals the Genetic Basis of Body Size Variation in Drosophila melanogaster
- (2011) Thomas L. Turner et al. PLoS Genetics
- GOSemSim: an R package for measuring semantic similarity among GO terms and gene products
- (2010) G. Yu et al. BIOINFORMATICS
- The Genetics of Human Adaptation: Hard Sweeps, Soft Sweeps, and Polygenic Adaptation
- (2010) Jonathan K. Pritchard et al. CURRENT BIOLOGY
- Paleo-perspectives on ocean acidification
- (2010) Carles Pelejero et al. TRENDS IN ECOLOGY & EVOLUTION
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- RNA helicase Ddx39 is expressed in the developing central nervous system, limb, otic vesicle, branchial arches and facial mesenchyme of Xenopus laevis
- (2009) Jonathan M. Wilson et al. GENE EXPRESSION PATTERNS
- Ocean Acidification: The Other CO2Problem
- (2008) Scott C. Doney et al. Annual Review of Marine Science
- Effects of climate and overfishing on zooplankton dynamics and ecosystem structure: regime shifts, trophic cascade, and feedback loops in a simple ecosystem
- (2008) C. Mollmann et al. ICES JOURNAL OF MARINE SCIENCE
- Cryptic ecological diversification of a planktonic estuarine copepod, Acartia tonsa
- (2008) GANG CHEN et al. MOLECULAR ECOLOGY
- Adaptation from standing genetic variation
- (2007) R BARRETT et al. TRENDS IN ECOLOGY & EVOLUTION
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started