The transcription factor Tbx5 regulates direction-selective retinal ganglion cell development and image stabilization

Diversification of multipotential postmitotic mouse retinal ganglion cell precursors into discrete types

(2022) Karthik Shekhar et al.   eLife

Atoh7-independent specification of retinal ganglion cell identity

(2021) Justin Brodie-Kommit et al.   Science Advances

OFF-transient alpha RGCs mediate looming triggered innate defensive response

(2021) Fei Wang et al.   CURRENT BIOLOGY

Development of the vertebrate retinal direction-selective circuit

(2021) Natalie R. Hamilton et al.   DEVELOPMENTAL BIOLOGY

Neurogenesis and Specification of Retinal Ganglion Cells

(2020) Kim Tuyen Nguyen-Ba-Charvet et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Modeling Human TBX5 Haploinsufficiency Predicts Regulatory Networks for Congenital Heart Disease

(2020) Irfan S. Kathiriya et al.   DEVELOPMENTAL CELL

Essential Roles of Tbr1 in the Formation and Maintenance of the Orientation-Selective J-RGCs and a Group of OFF-Sustained RGCs in Mouse

(2019) Takae Kiyama et al.   Cell Reports

Single-Cell Profiles of Retinal Ganglion Cells Differing in Resilience to Injury Reveal Neuroprotective Genes

(2019) Nicholas M. Tran et al.   NEURON

Tbr1 instructs laminar patterning of retinal ganglion cell dendrites

(2018) Jinyue Liu et al.   NATURE NEUROSCIENCE

Single cell transcriptome profiling of retinal ganglion cells identifies cellular subtypes

(2018) Bruce A. Rheaume et al.   Nature Communications

Variation in Activity State, Axonal Projection, and Position Define the Transcriptional Identity of Individual Neocortical Projection Neurons

(2018) Maxime Chevée et al.   Cell Reports

Genetic access to neurons in the accessory optic system reveals a role for Sema6A in midbrain circuitry mediating motion perception

(2018) Brendan N. Lilley et al.   JOURNAL OF COMPARATIVE NEUROLOGY

A retinal code for motion along the gravitational and body axes

(2017) Shai Sabbah et al.   NATURE

Single-cell mRNA quantification and differential analysis with Census

(2017) Xiaojie Qiu et al.   NATURE METHODS

Diverse Central Projection Patterns of Retinal Ganglion Cells

(2017) Emily M. Martersteck et al.   Cell Reports

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics

(2016) Karthik Shekhar et al.   CELL

The Cardiac TBX5 Interactome Reveals a Chromatin Remodeling Network Essential for Cardiac Septation

(2016) Lauren Waldron et al.   DEVELOPMENTAL CELL

Adaptive Acceleration of Visually Evoked Smooth Eye Movements in Mice

(2016) Takashi Kodama et al.   JOURNAL OF NEUROSCIENCE

Congenital Nystagmus Gene FRMD7 Is Necessary for Establishing a Neuronal Circuit Asymmetry for Direction Selectivity

(2016) Keisuke Yonehara et al.   NEURON

Tbx5 Buffers Inherent Left/Right Asymmetry Ensuring Symmetric Forelimb Formation

(2016) Fatima A. Sulaiman et al.   PLoS Genetics

Wnt proteins can direct planar cell polarity in vertebrate ectoderm

(2016) Chih-Wen Chu et al.   eLife

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Functional Assembly of Accessory Optic System Circuitry Critical for Compensatory Eye Movements

(2015) Lu O. Sun et al.   NEURON

T-box Transcription Regulator Tbr2 Is Essential for the Formation and Maintenance of Opn4/Melanopsin-Expressing Intrinsically Photosensitive Retinal Ganglion Cells

(2014) C.-A. Mao et al.   JOURNAL OF NEUROSCIENCE

Tbr2 Is Required to Generate a Neural Circuit Mediating the Pupillary Light Reflex

(2014) N. T. Sweeney et al.   JOURNAL OF NEUROSCIENCE

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

(2014) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Full-length RNA-seq from single cells using Smart-seq2

(2014) Simone Picelli et al.   Nature Protocols

Rapid Innate Defensive Responses of Mice to Looming Visual Stimuli

(2013) Melis Yilmaz et al.   CURRENT BIOLOGY

Genetic Dissection of Retinal Inputs to Brainstem Nuclei Controlling Image Stabilization

(2013) O. S. Dhande et al.   JOURNAL OF NEUROSCIENCE

Smart-seq2 for sensitive full-length transcriptome profiling in single cells

(2013) Simone Picelli et al.   NATURE METHODS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Direction selectivity in the retina: symmetry and asymmetry in structure and function

(2012) David I. Vaney et al.   NATURE REVIEWS NEUROSCIENCE

Direction-selective retinal ganglion cells arise from molecularly specified multipotential progenitors

(2012) I. De la Huerta et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

(2011) M. N. Cabili et al.   GENES & DEVELOPMENT

Co-occupancy by multiple cardiac transcription factors identifies transcriptional enhancers active in heart

(2011) A. He et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spatially asymmetric reorganization of inhibition establishes a motion-sensitive circuit

(2010) Keisuke Yonehara et al.   NATURE

Development of asymmetric inhibition underlying direction selectivity in the retina

(2010) Wei Wei et al.   NATURE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Distinct Roles of Transcription Factors Brn3a and Brn3b in Controlling the Development, Morphology, and Function of Retinal Ganglion Cells

(2009) Tudor C. Badea et al.   NEURON

Identification of Retinal Ganglion Cells and Their Projections Involved in Central Transmission of Information about Upward and Downward Image Motion

(2009) Keisuke Yonehara et al.   PLoS One

Secreted frizzled related protein 1 is a paracrine modulator of epithelial branching morphogenesis, proliferation, and secretory gene expression in the prostate

(2008) Margaret S. Joesting et al.   DEVELOPMENTAL BIOLOGY

A Comprehensive Negative Regulatory Program Controlled by Brn3b to Ensure Ganglion Cell Specification from Multipotential Retinal Precursors

(2008) F. Qiu et al.   JOURNAL OF NEUROSCIENCE

Expression of SPIG1 Reveals Development of a Retinal Ganglion Cell Subtype Projecting to the Medial Terminal Nucleus in the Mouse

(2008) Keisuke Yonehara et al.   PLoS One