From promise to application: root traits for enhanced nutrient capture in rice breeding

The role of root size versus root efficiency in phosphorus acquisition in rice

(2016) Asako Mori et al.   JOURNAL OF EXPERIMENTAL BOTANY

Root hair formation in rice (Oryza sativaL.) differs between root types and is altered in artificial growth conditions

(2016) Josefine Nestler et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genetic improvement for root growth angle to enhance crop production

(2015) Yusaku Uga et al.   BREEDING SCIENCE

Integration of P acquisition efficiency, P utilization efficiency and low grain P concentrations into P-efficient rice genotypes for specific target environments

(2015) Elke Vandamme et al.   NUTRIENT CYCLING IN AGROECOSYSTEMS

Imaging the interaction of roots and phosphate fertiliser granules using 4D X-ray tomography

(2015) Sharif Ahmed et al.   PLANT AND SOIL

Creation of fragrant rice by targeted knockout of theOsBADH2gene using TALEN technology

(2015) Qiwei Shan et al.   PLANT BIOTECHNOLOGY JOURNAL

Designed nucleases for targeted genome editing

(2015) Junwon Lee et al.   PLANT BIOTECHNOLOGY JOURNAL

Unmanned aerial platform-based multi-spectral imaging for field phenotyping of maize

(2015) M Zaman-Allah et al.   Plant Methods

Plant phenotyping: from bean weighing to image analysis

(2015) Achim Walter et al.   Plant Methods

CRISPR/Cas9-mediated genome editing and gene replacement in plants: Transitioning from lab to field

(2015) Scott M. Schaeffer et al.   PLANT SCIENCE

Single-copy gene based 50 K SNP chip for genetic studies and molecular breeding in rice

(2015) Nisha Singh et al.   Scientific Reports

Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

(2015) Jennifer Spindel et al.   PLoS Genetics

Genome-Wide Association Mapping for Yield and Other Agronomic Traits in an Elite Breeding Population of Tropical Rice (Oryza sativa)

(2015) Hasina Begum et al.   PLoS One

Unmasking Novel Loci for Internal Phosphorus Utilization Efficiency in Rice Germplasm through Genome-Wide Association Analysis

(2015) Matthias Wissuwa et al.   PLoS One

Soil quality and constraints in global rice production

(2014) S.M. Haefele et al.   GEODERMA

Soil coring at multiple field environments can directly quantify variation in deep root traits to select wheat genotypes for breeding

(2014) A. P. Wasson et al.   JOURNAL OF EXPERIMENTAL BOTANY

Breeding high-yielding drought-tolerant rice: genetic variations and conventional and molecular approaches

(2014) Arvind Kumar et al.   JOURNAL OF EXPERIMENTAL BOTANY

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

(2014) Muhua Wang et al.   NATURE GENETICS

Genome editing in rice and wheat using the CRISPR/Cas system

(2014) Qiwei Shan et al.   Nature Protocols

RiceVarMap: a comprehensive database of rice genomic variations

(2014) Hu Zhao et al.   NUCLEIC ACIDS RESEARCH

SNP-Seek database of SNPs derived from 3000 rice genomes

(2014) Nickolai Alexandrov et al.   NUCLEIC ACIDS RESEARCH

Phosphorus uptake and use efficiency of diverse West and Central African sorghum genotypes under field conditions in Mali

(2014) Willmar L. Leiser et al.   PLANT AND SOIL

Plant roots use a patterning mechanism to position lateral root branches toward available water

(2014) Y. Bao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A novel allele of the P-starvation tolerance gene OsPSTOL1 from African rice (Oryza glaberrima Steud) and its distribution in the genus Oryza

(2014) Juan Pariasca-Tanaka et al.   THEORETICAL AND APPLIED GENETICS

Image-based phenotyping for non-destructive screening of different salinity tolerance traits in rice

(2014) Aris Hairmansis et al.   Rice

The roots of future rice harvests

(2014) Nourollah Ahmadi et al.   Rice

The 3,000 rice genomes project

(2014)   GigaScience

Steep, cheap and deep: an ideotype to optimize water and N acquisition by maize root systems

(2013) Jonathan P. Lynch   ANNALS OF BOTANY

Enhanced efficiency nitrogen fertilizers for rice systems: Meta-analysis of yield and nitrogen uptake

(2013) Bruce A. Linquist et al.   FIELD CROPS RESEARCH

A High-Density SNP Genotyping Array for Rice Biology and Molecular Breeding

(2013) Haodong Chen et al.   Molecular Plant

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions

(2013) Yusaku Uga et al.   NATURE GENETICS

High resolution synchrotron imaging of wheat root hairs growing in soil and image based modelling of phosphate uptake

(2013) Samuel D. Keyes et al.   NEW PHYTOLOGIST

Modelling root–soil interactions using three–dimensional models of root growth, architecture and function

(2013) Vanessa M. Dunbabin et al.   PLANT AND SOIL

A whole-genome SNP array (RICE6K) for genomic breeding in rice

(2013) Huihui Yu et al.   PLANT BIOTECHNOLOGY JOURNAL

Comparative BAC-based physical mapping ofOryza sativassp.indicavar. 93-11 and evaluation of the two rice reference sequence assemblies

(2013) Yonglong Pan et al.   PLANT JOURNAL

Genome-Wide Association Mapping of Root Traits in a Japonica Rice Panel

(2013) Brigitte Courtois et al.   PLoS One

3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture

(2013) C. N. Topp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution

(2013) Jinfeng Chen et al.   Nature Communications

Enhancing phosphorus and zinc acquisition efficiency in rice: a critical review of root traits and their potential utility in rice breeding

(2012) T. J. Rose et al.   ANNALS OF BOTANY

Selection Strategy for Sorghum Targeting Phosphorus-limited Environments in West Africa: Analysis of Multi-environment Experiments

(2012) Willmar L. Leiser et al.   CROP SCIENCE

The protein kinase Pstol1 from traditional rice confers tolerance of phosphorus deficiency

(2012) Rico Gamuyao et al.   NATURE

Green Revolution: Impacts, limits, and the path ahead

(2012) P. L. Pingali   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Approaches towards nitrogen- and phosphorus-efficient rice

(2012) K. K. Vinod et al.   AoB Plants

Root plasticity as the key root trait for adaptation to various intensities of drought stress in rice

(2011) Mana Kano et al.   PLANT AND SOIL

Three-Dimensional Root Phenotyping with a Novel Imaging and Software Platform

(2011) R. T. Clark et al.   PLANT PHYSIOLOGY

Identification of qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields

(2011) Yusaku Uga et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Shovelomics: high throughput phenotyping of maize (Zea mays L.) root architecture in the field

(2010) Samuel Trachsel et al.   PLANT AND SOIL

Fine-mapping of qRL6.1, a major QTL for root length of rice seedlings grown under a wide range of NH4 + concentrations in hydroponic conditions

(2010) Mitsuhiro Obara et al.   THEORETICAL AND APPLIED GENETICS

The roots of a new green revolution

(2010) Griet Den Herder et al.   TRENDS IN PLANT SCIENCE

The story of phosphorus: Global food security and food for thought

(2009) Dana Cordell et al.   GLOBAL ENVIRONMENTAL CHANGE-HUMAN AND POLICY DIMENSIONS

Stress Response Versus Stress Tolerance: A Transcriptome Analysis of Two Rice Lines Contrasting in Tolerance to Phosphorus Deficiency

(2009) Juan Pariasca-Tanaka et al.   Rice

Novel approaches in plant breeding for rhizosphere-related traits

(2008) Matthias Wissuwa et al.   PLANT AND SOIL