The photomorphogenic factors UV-B RECEPTOR 1, ELONGATED HYPOCOTYL 5, and HY5 HOMOLOGUE are part of the UV-B signalling pathway in grapevine and mediate flavonol accumulation in response to the environment

Transcriptome and metabolite profiling reveals that prolonged drought modulates the phenylpropanoid and terpenoid pathway in white grapes (Vitis vinifera L.)

(2016) Stefania Savoi et al.   BMC PLANT BIOLOGY

Tools of the trade: studying molecular networks in plants

(2016) Sebastian Proost et al.   CURRENT OPINION IN PLANT BIOLOGY

A systems-oriented analysis of the grapevine R2R3-MYB transcription factor family uncovers new insights into the regulation of stilbene accumulation

(2016) Darren Chern Jan Wong et al.   DNA RESEARCH

UV-B perception and acclimation in Chlamydomonas reinhardtii

(2016) Kimberley Tilbrook et al.   PLANT CELL

Field-Grown Grapevine Berries Use Carotenoids and the Associated Xanthophyll Cycles to Acclimate to UV Exposure Differentially in High and Low Light (Shade) Conditions

(2016) Chandré Joubert et al.   Frontiers in Plant Science

ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression

(2015) Yuichi Aoki et al.   PLANT AND CELL PHYSIOLOGY

The Phenylpropanoid Pathway Is Controlled at Different Branches by a Set of R2R3-MYB C2 Repressors in Grapevine

(2015) Erika Cavallini et al.   PLANT PHYSIOLOGY

Microarray Analysis for the Screening of Genes Inducible by Light or Low Temperature in Post-veraison Grape Berries

(2015) Akifumi Azuma et al.   Horticulture Journal

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Genome-wide analysis and expression profile of the bZIP transcription factor gene family in grapevine (Vitis vinifera)

(2014) Jinyi Liu et al.   BMC GENOMICS

Annotation of gene function in citrus using gene expression information and co-expression networks

(2014) Darren CJ Wong et al.   BMC PLANT BIOLOGY

Solar ultraviolet radiation is necessary to enhance grapevine fruit ripening transcriptional and phenolic responses

(2014) Pablo Carbonell-Bejerano et al.   BMC PLANT BIOLOGY

Ultraviolet-B radiation modifies the quantitative and qualitative profile of flavonoids and amino acids in grape berries

(2014) J. Martínez-Lüscher et al.   PHYTOCHEMISTRY

Integrated Network Analysis Identifies Fight-Club Nodes as a Class of Hubs Encompassing Key Putative Switch Genes That Induce Major Transcriptome Reprogramming during Grapevine Development

(2014) Maria Concetta Palumbo et al.   PLANT CELL

ArabidopsisCAM7 and HY5 Physically Interact and Directly Bind to theHY5Promoter to Regulate Its Expression and Thereby Promote Photomorphogenesis

(2014) Nazia Abbas et al.   PLANT CELL

UV-B-Responsive Association of the Arabidopsis bZIP Transcription Factor ELONGATED HYPOCOTYL5 with Target Genes, Including Its Own Promoter

(2014) M. Binkert et al.   PLANT CELL

From UVR8 to flavonol synthase: UV-B-induced gene expression in Sauvignon blanc grape berry

(2014) LINLIN LIU et al.   PLANT CELL AND ENVIRONMENT

VTCdb: a gene co-expression database for the crop species Vitis vinifera (grapevine)

(2013) Darren CJ Wong et al.   BMC GENOMICS

HY5 regulates anthocyanin biosynthesis by inducing the transcriptional activation of the MYB75/PAP1 transcription factor inArabidopsis

(2013) Dong Ho Shin et al.   FEBS LETTERS

AtMYB7, a New Player in the Regulation of UV-Sunscreens in Arabidopsis thaliana

(2013) Silvia Fornalé et al.   PLANT AND CELL PHYSIOLOGY

Short- and long-term physiological responses of grapevine leaves to UV-B radiation

(2013) J. Martínez-Lüscher et al.   PLANT SCIENCE

Conversion from CUL4-based COP1-SPA E3 apparatus to UVR8-COP1-SPA complexes underlies a distinct biochemical function of COP1 under UV-B

(2013) X. Huang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Incorporating Motif Analysis into Gene Co-expression Networks Reveals Novel Modular Expression Pattern and New Signaling Pathways

(2013) Shisong Ma et al.   PLoS Genetics

UVR8 Mediates UV-B-Induced Arabidopsis Defense Responses against Botrytis cinerea by Controlling Sinapate Accumulation

(2012) Patricia V. Demkura et al.   Molecular Plant

Structural basis of ultraviolet-B perception by UVR8

(2012) Di Wu et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The Grapevine Expression Atlas Reveals a Deep Transcriptome Shift Driving the Entire Plant into a Maturation Program

(2012) M. Fasoli et al.   PLANT CELL

Flavonoid biosynthesis-related genes in grape skin are differentially regulated by temperature and light conditions

(2012) Akifumi Azuma et al.   PLANTA

C-terminal region of the UV-B photoreceptor UVR8 initiates signaling through interaction with the COP1 protein

(2012) C. Cloix et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

UV-B photoreceptor-mediated signalling in plants

(2012) Marc Heijde et al.   TRENDS IN PLANT SCIENCE

Advantages and disadvantages of UV-B radiations on Grapevine (Vitis sp.)

(2012) Tjaša Jug et al.   Emirates Journal of Food and Agriculture

Identification of Cis-Acting Promoter Elements in Cold- and Dehydration-Induced Transcriptional Pathways in Arabidopsis, Rice, and Soybean

(2011) K. Maruyama et al.   DNA RESEARCH

Perception of UV-B by the Arabidopsis UVR8 Protein

(2011) L. Rizzini et al.   SCIENCE

Transcriptome changes in grapevine (Vitis vinifera L.) cv. Malbec leaves induced by ultraviolet-B radiation

(2010) Mariela A Pontin et al.   BMC PLANT BIOLOGY

Influence of different light intensity regimes on leaf features of Vitis vinifera L. in ultraviolet radiation filtered condition

(2010) Martina Pollastrini et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

THE PHOTOPHYSICS AND PHOTOCHEMISTRY OF THE NEAR-UV ABSORBING AMINO ACIDS-I. TRYPTOPHAN AND ITS SIMPLE DERIVATIVES

(2010) David Creed   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Functional Differentiation of the Glycosyltransferases That Contribute to the Chemical Diversity of Bioactive Flavonol Glycosides in Grapevines (Vitis vinifera)

(2010) E. Ono et al.   PLANT CELL

Biotic stress globally downregulates photosynthesis genes

(2010) DAMLA D. BILGIN et al.   PLANT CELL AND ENVIRONMENT

Genome-wide mapping of the HY5-mediated genenetworks in Arabidopsis that involve both transcriptional and post-transcriptional regulation

(2010) Huiyong Zhang et al.   PLANT JOURNAL

Signal Transduction in Responses to UV-B Radiation

(2009) Gareth I. Jenkins   Annual Review of Plant Biology

Rank of Correlation Coefficient as a Comparable Measure for Biological Significance of Gene Coexpression

(2009) T. Obayashi et al.   DNA RESEARCH

Interaction of COP1 and UVR8 regulates UV-B-induced photomorphogenesis and stress acclimation in Arabidopsis

(2009) Jean-Jacques Favory et al.   EMBO JOURNAL

Post-veraison sunlight exposure induces MYB-mediated transcriptional regulation of anthocyanin and flavonol synthesis in berry skins of Vitis vinifera

(2009) José Tomás Matus et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Grapevine R2R3-MYB Transcription Factor VvMYBF1 Regulates Flavonol Synthesis in Developing Grape Berries

(2009) S. Czemmel et al.   PLANT PHYSIOLOGY

Phenolic Composition in Grape (Vitis vinifera L. cv. Malbec) Ripened with Different Solar UV-B Radiation Levels by Capillary Zone Electrophoresis

(2008) Federico Berli et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

DNA-Binding Study Identifies C-Box and Hybrid C/G-Box or C/A-Box Motifs as High-Affinity Binding Sites for STF1 and LONG HYPOCOTYL5 Proteins

(2008) Y. H. Song et al.   PLANT PHYSIOLOGY