Transcriptome and metabolite profiling reveals that prolonged drought modulates the phenylpropanoid and terpenoid pathway in white grapes (Vitis vinifera L.)

Effect of water deficit and severe shoot trimming on the composition ofVitis vinifera L. Merlot grapes and wines

(2015) J.C. Herrera et al.   AUSTRALIAN JOURNAL OF GRAPE AND WINE RESEARCH

New candidate genes for the fine regulation of the colour of grapes

(2015) Laura Costantini et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Genome-Wide Scenario of Terpene Pathways in Self-pollinated Artemisia annua

(2015) Dong-Ming Ma et al.   Molecular Plant

Metabolite profiling elucidates communalities and differences in the polyphenol biosynthetic pathways of red and white Muscat genotypes

(2015) Asfaw Degu et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Cultivar specific metabolic changes in grapevines berry skins in relation to deficit irrigation and hydraulic behavior

(2015) Uri Hochberg et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Acclimation mechanisms elicited by sprayed abscisic acid, solar UV-B and water deficit in leaf tissues of field-grown grapevines

(2015) Rodrigo Alonso et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Solar ultraviolet radiation is necessary to enhance grapevine fruit ripening transcriptional and phenolic responses

(2014) Pablo Carbonell-Bejerano et al.   BMC PLANT BIOLOGY

Metabolite and transcript profiling of berry skin during fruit development elucidates differential regulation between Cabernet Sauvignon and Shiraz cultivars at branching points in the polyphenol pathway

(2014) Asfaw Degu et al.   BMC PLANT BIOLOGY

Water shortage and quality of fleshy fruits—making the most of the unavoidable

(2014) Julie Ripoll et al.   JOURNAL OF EXPERIMENTAL BOTANY

Origins of Grape and Wine Aroma. Part 1. Chemical Components and Viticultural Impacts

(2013) A. L. Robinson et al.   AMERICAN JOURNAL OF ENOLOGY AND VITICULTURE

VTCdb: a gene co-expression database for the crop species Vitis vinifera (grapevine)

(2013) Darren CJ Wong et al.   BMC GENOMICS

Metabolite profiling and network analysis reveal coordinated changes in grapevine water stress response

(2013) Uri Hochberg et al.   BMC PLANT BIOLOGY

Abiotic stress effects on grapevine (Vitis vinifera L.): Focus on abscisic acid-mediated consequences on secondary metabolism and berry quality

(2013) Alessandra Ferrandino et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Over-expression of Arabidopsis thaliana β-carotene hydroxylase (chyB) gene enhances drought tolerance in transgenic tobacco

(2013) Qing Zhao et al.   JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY

Stress Enhances the Synthesis of Secondary Plant Products: The Impact of Stress-Related Over-Reduction on the Accumulation of Natural Products

(2013) Dirk Selmar et al.   PLANT AND CELL PHYSIOLOGY

The R2R3-MYB Transcription Factors MYB14 and MYB15 Regulate Stilbene Biosynthesis in Vitis vinifera

(2013) J. Holl et al.   PLANT CELL

An Extensive Evaluation of Read Trimming Effects on Illumina NGS Data Analysis

(2013) Cristian Del Fabbro et al.   PLoS One

Climate change, wine, and conservation

(2013) L. Hannah et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Incorporating Motif Analysis into Gene Co-expression Networks Reveals Novel Modular Expression Pattern and New Signaling Pathways

(2013) Shisong Ma et al.   PLoS Genetics

Effect of Benzothiadiazole and Methyl Jasmonate on the Volatile Compound Composition of Vitis vinifera L. Monastrell Grapes and Wines

(2012) Encarna Gómez-Plaza et al.   AMERICAN JOURNAL OF ENOLOGY AND VITICULTURE

D-optimal design of an untargeted HS-SPME-GC-TOF metabolite profiling method

(2012) Bruno Fedrizzi et al.   ANALYST

High-throughput carotenoid profiling using multivariate curve resolution

(2012) Ron Wehrens et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

The genes and enzymes of the carotenoid metabolic pathway in Vitis vinifera L.

(2012) Philip R Young et al.   BMC GENOMICS

Genome-wide analysis of the grapevine stilbene synthase multigenic family: genomic organization and expression profiles upon biotic and abiotic stresses

(2012) Alessandro Vannozzi et al.   BMC PLANT BIOLOGY

A Versatile Targeted Metabolomics Method for the Rapid Quantification of Multiple Classes of Phenolics in Fruits and Beverages

(2012) Urska Vrhovsek et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Metabolism of terpenes in the response of grape (Vitis vinifera L.) leaf tissues to UV-B radiation

(2012) Mariana Gil et al.   PHYTOCHEMISTRY

Application of the Gini Correlation Coefficient to Infer Regulatory Relationships in Transcriptome Analysis

(2012) C. Ma et al.   PLANT PHYSIOLOGY

Expression of flavonoid genes in the red grape berry of ‘Alicante Bouschet’ varies with the histological distribution of anthocyanins and their chemical composition

(2012) Luigi Falginella et al.   PLANTA

A Regulatory Network for Coordinated Flower Maturation

(2012) Paul H. Reeves et al.   PLoS Genetics

Genetics and Control of Tomato Fruit Ripening and Quality Attributes

(2011) Harry J. Klee et al.   Annual Review of Genetics

Functional effect of grapevine 1-deoxy-D-xylulose 5-phosphate synthase substitution K284N on Muscat flavour formation

(2011) Juri Battilana et al.   JOURNAL OF EXPERIMENTAL BOTANY

Accumulation of γ- Rather than α-Tocopherol Alters Ethylene Signaling Gene Expression in the vte4 Mutant of Arabidopsis thaliana

(2011) Jana Cela et al.   PLANT AND CELL PHYSIOLOGY

Effect of water deficit on Merlot grape tannins and anthocyanins across four seasons

(2011) Barbara Bucchetti et al.   SCIENTIA HORTICULTURAE

Grapevine under deficit irrigation: hints from physiological and molecular data

(2010) M. M. Chaves et al.   ANNALS OF BOTANY

Relative proportions of seed, skin and flesh, in ripe berries from Cabernet Sauvignon grapevines grown in a vineyard either well irrigated or under water deficit

(2010) GASPAR ROBY et al.   AUSTRALIAN JOURNAL OF GRAPE AND WINE RESEARCH

Functional Annotation, Genome Organization and Phylogeny of the Grapevine (Vitis vinifera) Terpene Synthase Gene Family Based on Genome Assembly, FLcDNA Cloning, and Enzyme Assays

(2010) Diane M Martin et al.   BMC PLANT BIOLOGY

Identification of Putative Stage-Specific Grapevine Berry Biomarkers and Omics Data Integration into Networks

(2010) A. Zamboni et al.   PLANT PHYSIOLOGY

Water deficit alters differentially metabolic pathways affecting important flavor and quality traits in grape berries of Cabernet Sauvignon and Chardonnay

(2009) Laurent G Deluc et al.   BMC GENOMICS

Metabolic Networks: How to Identify Key Components in the Regulation of Metabolism and Growth

(2009) M. Stitt et al.   PLANT PHYSIOLOGY