Single-cell transcriptomic analysis of neuroepithelial cells and other cell types of the gills of zebrafish (Danio rerio) exposed to hypoxia

Identification of oxygen-sensitive neuroepithelial cells through an endogenous reporter gene in larval and adult transgenic zebrafish

(2021) Wen Pan et al.   CELL AND TISSUE RESEARCH

Immunologic Profiling of the Atlantic Salmon Gill by Single Nuclei Transcriptomics

(2021) Alexander C. West et al.   Frontiers in Immunology

Lactate sensing mechanisms in arterial chemoreceptor cells

(2021) Hortensia Torres-Torrelo et al.   Nature Communications

Developmental role of PHD2 in the pathogenesis of pseudohypoxic pheochromocytoma

(2021) Luise Eckardt et al.   ENDOCRINE-RELATED CANCER

Acute O2 sensing through HIF2α-dependent expression of atypical cytochrome oxidase subunits in arterial chemoreceptors

(2020) Alejandro Moreno-Domínguez et al.   Science Signaling

Expression of Acetylcholine- and G protein coupled Muscarinic receptor in the Neuroepithelial cells (NECs) of the obligated air-breathing fish, Arapaima gigas (Arapaimatidae: Teleostei)

(2020) Giacomo Zaccone et al.   ZOOLOGY

The cytokine GDF15 signals through a population of brainstem cholecystokinin neurons to mediate anorectic signalling

(2020) Amy A Worth et al.   eLife

Disruption of tph1 genes demonstrates the importance of serotonin in regulating ventilation in larval zebrafish (Danio rerio)

(2020) Yihang Kevin Pan et al.   RESPIRATORY PHYSIOLOGY & NEUROBIOLOGY

Comparison of RNA-Seq and Microarray Gene Expression Platforms for the Toxicogenomic Evaluation of Liver From Short-Term Rat Toxicity Studies

(2019) Mohan S. Rao et al.   Frontiers in Genetics

The effects of lactate ions on the cardiorespiratory system in rainbow trout (Oncorhynchus mykiss)

(2019) Mikkel Thy Thomsen et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors

(2019) Christopher S. McGinnis et al.   Cell Systems

Comprehensive Integration of Single-Cell Data

(2019) Tim Stuart et al.   CELL

MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices

(2019) Christopher S. McGinnis et al.   NATURE METHODS

Heterochromatin protein 1α interacts with parallel RNA and DNA G-quadruplexes

(2019) Ruby J Roach et al.   NUCLEIC ACIDS RESEARCH

DEsingle for detecting three types of differential expression in single-cell RNA-seq data

(2018) Zhun Miao et al.   BIOINFORMATICS

PHD2 inactivation in Type I cells drives HIF-2α dependent multi-lineage hyperplasia and the formation of paraganglioma-like carotid bodies

(2018) James W. Fielding et al.   JOURNAL OF PHYSIOLOGY-LONDON

Tuft Cells—Systemically Dispersed Sensory Epithelia Integrating Immune and Neural Circuitry

(2018) Claire E. O'Leary et al.   Annual Review of Immunology

Characterization of ion channels and O2 sensitivity in gill neuroepithelial cells of the anoxia-tolerant goldfish (Carassius auratus)

(2017) Peter C. Zachar et al.   JOURNAL OF NEUROPHYSIOLOGY

Gene expression analyses reveal metabolic specifications in acute O2 -sensing chemoreceptor cells

(2017) Lin Gao et al.   JOURNAL OF PHYSIOLOGY-LONDON

Evolution of the hypoxia-sensitive cells involved in amniote respiratory reflexes

(2017) Dorit Hockman et al.   eLife

Distribution and morphology of cholinergic cells in the branchial epithelium of zebrafish (Danio rerio)

(2016) Peter C. Zachar et al.   CELL AND TISSUE RESEARCH

Lentivirus-mediated PHLDA2 overexpression inhibits trophoblast proliferation, migration and invasion, and induces apoptosis

(2016) FENG JIN et al.   INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE

Single cell transcriptome analysis of mouse carotid body glomus cells

(2016) Ting Zhou et al.   JOURNAL OF PHYSIOLOGY-LONDON

Lmx1a and Lmx1b regulate mitochondrial functions and survival of adult midbrain dopaminergic neurons

(2016) Hélène Doucet-Beaupré et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Purinergic and Cholinergic Drugs Mediate Hyperventilation in Zebrafish: Evidence from a Novel Chemical Screen

(2016) Saman Rahbar et al.   PLoS One

Peripheral chemoreceptors in fish: A brief history and a look ahead

(2015) Michael G. Jonz et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Regulation of ventilatory sensitivity and carotid body proliferation in hypoxia by the PHD2/HIF-2 pathway

(2015) Emma J. Hodson et al.   JOURNAL OF PHYSIOLOGY-LONDON

Characterisation of putative oxygen chemoreceptors in bowfin (Amia calva)

(2014) C. S. Porteus et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Extracellular H+ induces Ca2+ signals in respiratory chemoreceptors of zebrafish

(2014) Sara J. Abdallah et al.   PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY

Hypoxia-inducible factor-1 mediates adaptive developmental plasticity of hypoxia tolerance in zebrafish, Danio rerio

(2014) C. E. Robertson et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genetic lineage labeling in zebrafish uncovers novel neural crest contributions to the head, including gill pillar cells

(2013) A. Mongera et al.   DEVELOPMENT

The neural crest

(2013) R. Mayor et al.   DEVELOPMENT

The human carotid body transcriptome with focus on oxygen sensing and inflammation - a comparative analysis

(2012) Souren Mkrtchian et al.   JOURNAL OF PHYSIOLOGY-LONDON

The serotonergic system in fish

(2011) Christina Lillesaar   JOURNAL OF CHEMICAL NEUROANATOMY

Neuroepithelial cells and the hypoxia emersion response in the amphibious fish Kryptolebias marmoratus

(2011) K. S. Regan et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Three groups of interneurons account for nearly 100% of neocortical GABAergic neurons

(2010) Bernardo Rudy et al.   Developmental Neurobiology

Neurotransmitter and neuromodulatory mechanisms at peripheral arterial chemoreceptors

(2010) Colin A. Nurse   EXPERIMENTAL PHYSIOLOGY

Zebrafish (Danio rerio) gill neuroepithelial cells are sensitive chemoreceptors for environmental CO2

(2010) Z. Qin et al.   JOURNAL OF PHYSIOLOGY-LONDON

Zebrafish grainyhead-like1 is a common marker of different non-keratinocyte epidermal cell lineages, which segregate from each other in a Foxi3-dependent manner

(2009) Martina Jnicke et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

Comparative analysis of serotonin receptor (HTR1A/HTR1B families) and transporter (slc6a4a/b) gene expression in the zebrafish brain

(2008) William H.J. Norton et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Retinoic acid in development: towards an integrated view

(2008) Karen Niederreither et al.   NATURE REVIEWS GENETICS