Profiling 26,000 Aplysia californica neurons by single cell mass spectrometry reveals neuronal populations with distinct neuropeptide profiles

Anatomical structures, cell types and biomarkers of the Human Reference Atlas

(2021) Katy Börner et al.   NATURE CELL BIOLOGY

Cell type ontologies of the Human Cell Atlas

(2021) David Osumi-Sutherland et al.   NATURE CELL BIOLOGY

Image-guided MALDI mass spectrometry for high-throughput single-organelle characterization

(2021) Daniel C. Castro et al.   NATURE METHODS

Single-Cell Classification Using Mass Spectrometry through Interpretable Machine Learning

(2020) Yuxuan Richard Xie et al.   ANALYTICAL CHEMISTRY

Spatial Metabolomics of the Human Kidney using MALDI Trapped Ion Mobility Imaging Mass Spectrometry

(2020) Elizabeth Kathleen Neumann et al.   ANALYTICAL CHEMISTRY

Neuropeptidomic Profiling and Localization in the Crustacean Cardiac Ganglion Using Mass Spectrometry Imaging with Multiple Platforms

(2020) Kellen DeLaney et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

SignalP 5.0 improves signal peptide predictions using deep neural networks

(2019) José Juan Almagro Armenteros et al.   NATURE BIOTECHNOLOGY

Lipid Heterogeneity between Astrocytes and Neurons Revealed by Single-Cell MALDI-MS Combined with Immunocytochemical Classification

(2019) Elizabeth K. Neumann et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Lipid Analysis of Thirty-thousand Individual Rodent Cerebral Cells using High-Resolution Mass Spectrometry

(2019) Elizabeth Kathleen Neumann et al.   ANALYTICAL CHEMISTRY

High-Performance Molecular Imaging with MALDI Trapped Ion-Mobility Time-of-Flight (timsTOF) Mass Spectrometry

(2019) Jeffrey M. Spraggins et al.   ANALYTICAL CHEMISTRY

Newly Identified Aplysia SPTR-Gene Family-Derived Peptides: Localization and Function

(2018) Guo Zhang et al.   ACS Chemical Neuroscience

Multifaceted Expression of Peptidergic Modulation in the Feeding System of Aplysia

(2018) Elizabeth C. Cropper et al.   ACS Chemical Neuroscience

Optically Guided Single Cell Mass Spectrometry of Rat Dorsal Root Ganglia to Profile Lipids, Peptides and Proteins

(2018) Thanh D. Do et al.   CHEMPHYSCHEM

T-Probe: An Integrated Microscale Device for Online In Situ Single Cell Analysis and Metabolic Profiling Using Mass Spectrometry

(2018) Renmeng Liu et al.   ANALYTICAL CHEMISTRY

A molecular atlas of cell types and zonation in the brain vasculature

(2018) Michael Vanlandewijck et al.   NATURE

Exploring the Fundamental Structures of Life: Non-targeted, Chemical Analysis of Single Cells and Subcellular Structures

(2018) Elizabeth K. Neumann et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Discovery of leucokinin-like neuropeptides that modulate a specific parameter of feeding motor programs in the molluscan model,Aplysia

(2017) Guo Zhang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Categorizing Cells on the Basis of their Chemical Profiles: Progress in Single-Cell Mass Spectrometry

(2017) Troy J. Comi et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

microMS: A Python Platform for Image-Guided Mass Spectrometry Profiling

(2017) Troy J. Comi et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Functional consequences of neuropeptide and small-molecule co-transmission

(2017) Michael P. Nusbaum et al.   NATURE REVIEWS NEUROSCIENCE

Single-Cell RNA Sequencing: Unraveling the Brain One Cell at a Time

(2017) Dimitry Ofengeim et al.   TRENDS IN MOLECULAR MEDICINE

Single Cell Peptide Heterogeneity of Rat Islets of Langerhans

(2016) Erik T. Jansson et al.   ACS Chemical Biology

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics

(2016) Karthik Shekhar et al.   CELL

Label-free Quantification of Proteins in Single Embryonic Cells with Neural Fate in the Cleavage-Stage Frog (Xenopus laevis) Embryo using Capillary Electrophoresis Electrospray Ionization High-Resolution Mass Spectrometry (CE-ESI-HRMS)

(2016) Camille Lombard-Banek et al.   MOLECULAR & CELLULAR PROTEOMICS

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

Analysis of the Yeast Peptidome and Comparison with the Human Peptidome

(2016) Sayani Dasgupta et al.   PLoS One

Classification of Large Cellular Populations and Discovery of Rare Cells Using Single Cell Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry

(2015) Ta-Hsuan Ong et al.   ANALYTICAL CHEMISTRY

Peptidomics and Secretomics of the Mammalian Peripheral Sensory-Motor System

(2015) Emily G. Tillmaand et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Single Cell Analysis with Probe ESI-Mass Spectrometry: Detection of Metabolites at Cellular and Subcellular Levels

(2014) Xiaoyun Gong et al.   ANALYTICAL CHEMISTRY

Patch Clamp Electrophysiology and Capillary Electrophoresis–Mass Spectrometry Metabolomics for Single Cell Characterization

(2014) Jordan T. Aerts et al.   ANALYTICAL CHEMISTRY

The Single-Probe: A Miniaturized Multifunctional Device for Single Cell Mass Spectrometry Analysis

(2014) Ning Pan et al.   ANALYTICAL CHEMISTRY

Stimulation and release from neurons via a dual capillary collection device interfaced to mass spectrometry

(2013) Yi Fan et al.   ANALYST

Characterization of GdFFD, a d-Amino Acid-containing Neuropeptide That Functions as an Extrinsic Modulator of theAplysiaFeeding Circuit

(2013) Lu Bai et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Desorption Electrospray Ionization Mass Spectrometry Reveals Lipid Metabolism of Individual Oocytes and Embryos

(2013) Andrés Felipe González-Serrano et al.   PLoS One

Mass spectrometry-based metabolomics of single yeast cells

(2013) A. J. Ibanez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single oocyte and single embryo lipid analysis by desorption electrospray ionization mass spectrometry

(2012) C. R. Ferreira et al.   JOURNAL OF MASS SPECTROMETRY

Comparative peptidomics analysis of neural adaptations in rats repeatedly exposed to amphetamine

(2012) Elena V. Romanova et al.   JOURNAL OF NEUROCHEMISTRY

Urotensin II in Invertebrates: From Structure to Function in Aplysia californica

(2012) Elena V. Romanova et al.   PLoS One

Proteomic characterization of the abdominal ganglion of Aplysia californica-A protein resource for neuroscience

(2012) Ruth Birner-Gruenberger et al.   PROTEOMICS

Collection of Peptides Released from Single Neurons with Particle-Embedded Monolithic Capillaries Followed by Detection with Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry

(2011) Yi Fan et al.   ANALYTICAL CHEMISTRY

Extensive Characterization of Tupaia belangeri Neuropeptidome Using an Integrated Mass Spectrometric Approach

(2011) Filomena Petruzziello et al.   JOURNAL OF PROTEOME RESEARCH

Proteomics reveals selective regulation of proteins in response to memory-related serotonin stimulation in Aplysia californica ganglia

(2011) Francisco J. Monje et al.   PROTEOMICS

A first partial Aplysia californica proteome

(2010) Yanwei Sun et al.   AMINO ACIDS

Distinct Mechanisms Produce Functionally Complementary Actions of Neuropeptides That Are Structurally Related But Derived from Different Precursors

(2010) F. S. Vilim et al.   JOURNAL OF NEUROSCIENCE

Collecting Peptide Release from the Brain Using Porous Polymer Monolith-Based Solid Phase Extraction Capillaries

(2009) Jamie M. Iannacone et al.   ANALYTICAL CHEMISTRY

Capillary Electrophoresis with Electrospray Ionization Mass Spectrometric Detection for Single-Cell Metabolomics

(2009) Theodore Lapainis et al.   ANALYTICAL CHEMISTRY

Mass Spectral Analysis of Neuropeptide Expression and Distribution in the Nervous System of the LobsterHomarus americanus

(2009) Ruibing Chen et al.   JOURNAL OF PROTEOME RESEARCH

Endogenous Peptide Discovery of the Rat Circadian Clock

(2009) Ji Eun Lee et al.   MOLECULAR & CELLULAR PROTEOMICS

Aplysia Bag Cells Function as a Distributed Neurosecretory Network

(2007) Nathan G. Hatcher et al.   JOURNAL OF NEUROPHYSIOLOGY