Analysis of the Yeast Peptidome and Comparison with the Human Peptidome

Analytic framework for peptidomics applied to large-scale neuropeptide identification

(2016) Anna Secher et al.   Nature Communications

Limitations of Mass Spectrometry-Based Peptidomic Approaches

(2015) Lloyd D. Fricker   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Pri sORF peptides induce selective proteasome-mediated protein processing

(2015) J. Zanet et al.   SCIENCE

Reduced Levels of Proteasome Products in a Mouse Striatal Cell Model of Huntington’s Disease

(2015) Sayani Dasgupta et al.   PLoS One

Proteasomes Associated with the Blm10 Activator Protein Antagonize Mitochondrial Fission through Degradation of the Fission Protein Dnm1

(2014) Krisztina Tar et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Harnessing the Unique Structural Properties of Isolated α-Helices

(2014) Carter J. Swanson et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

(2014) Juan A Vizcaíno et al.   NATURE BIOTECHNOLOGY

A comprehensive transcriptional portrait of human cancer cell lines

(2014) Christiaan Klijn et al.   NATURE BIOTECHNOLOGY

Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells

(2014) Nils A Kulak et al.   NATURE METHODS

Proteasome Inhibitors Alter Levels of Intracellular Peptides in HEK293T and SH-SY5Y Cells

(2014) Sayani Dasgupta et al.   PLoS One

Global Proteome Turnover Analyses of the Yeasts S. cerevisiae and S. pombe

(2014) Romain Christiano et al.   Cell Reports

Peptide docking and structure-based characterization of peptide binding: from knowledge to know-how

(2013) Nir London et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Alterations of the Intracellular Peptidome in Response to the Proteasome Inhibitor Bortezomib

(2013) Julia S. Gelman et al.   PLoS One

Peptidomic Analysis of HEK293T Cells: Effect of the Proteasome Inhibitor Epoxomicin on Intracellular Peptides

(2012) Lloyd D. Fricker et al.   JOURNAL OF PROTEOME RESEARCH

Biogenesis of the Saccharomyces cerevisiae Pheromone a-Factor, from Yeast Mating to Human Disease

(2012) S. Michaelis et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Identification of intracellular peptides in rat adipose tissue: Insights into insulin resistance

(2012) Denise A. Berti et al.   PROTEOMICS

Natural intracellular peptides can modulate the interactions of mouse brain proteins and thimet oligopeptidase with 14-3-3ε and calmodulin

(2012) Lilian C. Russo et al.   PROTEOMICS

Comparison of extraction methods for peptidomics analysis of mouse brain tissue

(2011) Annemie Van Dijck et al.   JOURNAL OF NEUROSCIENCE METHODS

Impact of Temperature Dependent Sampling Procedures in Proteomics and Peptidomics – A Characterization of the Liver and Pancreas Post Mortem Degradome

(2010) Birger Scholz et al.   MOLECULAR & CELLULAR PROTEOMICS

Compartmentalized MHC class I antigen processing enhances immunosurveillance by circumventing the law of mass action

(2010) A. Lev et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Small Peptides Switch the Transcriptional Activity of Shavenbaby During Drosophila Embryogenesis

(2010) T. Kondo et al.   SCIENCE

Peptidic modulators of protein-protein interactions: Progress and challenges in computational design

(2009) Mor Rubinstein et al.   BIOPOLYMERS

Quantification of the yeast transcriptome by single-molecule sequencing

(2009) Doron Lipson et al.   NATURE BIOTECHNOLOGY

Proteomics analyses reveal the evolutionary conservation and divergence of N-terminal acetyltransferases from yeast and humans

(2009) T. Arnesen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE

Rationally designed peptide regulators of protein kinase C

(2008) Eric N. Churchill et al.   TRENDS IN ENDOCRINOLOGY AND METABOLISM