A flexible method for estimating tip diversification rates across a range of speciation and extinction scenarios

Studying speciation and extinction dynamics from phylogenies: addressing identifiability issues

(2022) Hélène Morlon et al.   TRENDS IN ECOLOGY & EVOLUTION

Mountains, climate and niche heterogeneity explain global patterns of fern diversity

(2021) Jacob S. Suissa et al.   JOURNAL OF BIOGEOGRAPHY

Fast and accurate estimation of species-specific diversification rates using data augmentation

(2021) Odile Maliet et al.   SYSTEMATIC BIOLOGY

Retiring “Cradles” and “Museums” of Biodiversity

(2021) Thais Vasconcelos et al.   AMERICAN NATURALIST

Pulled Diversification Rates, Lineages-Through-Time Plots, and Modern Macroevolutionary Modeling

(2021) Andrew J Helmstetter et al.   SYSTEMATIC BIOLOGY

A Multi-Type Birth-Death model for Bayesian inference of lineage-specific birth and death rates

(2020) Joëlle Barido-Sottani et al.   SYSTEMATIC BIOLOGY

Diversification rate vs. diversification density: Decoupled consequences of plant height for diversification of Alooideae in time and space

(2020) Florian C. Boucher et al.   PLoS One

Diversification in evolutionary arenas-Assessment and synthesis

(2020) Nicolai M. Nürk et al.   Ecology and Evolution

Is dispersal mode a driver of diversification and geographical distribution in the tropical plant family Melastomataceae?

(2020) Marcelo Reginato et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Historical climatic instability predicts the inverse latitudinal pattern in speciation rate of modern mammalian biota

(2020) Jennifer Morales‐Barbero et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The evolution of a tropical biodiversity hotspot

(2020) Michael G. Harvey et al.   SCIENCE

Diatoms diversify and turn over faster in freshwater than marine environments

(2019) Teofil Nakov et al.   EVOLUTION

Estimating Diversification Rates on Incompletely Sampled Phylogenies: Theoretical Concerns and Practical Solutions

(2019) Jonathan Chang et al.   SYSTEMATIC BIOLOGY

Constructing a broadly inclusive seed plant phylogeny

(2018) Stephen A. Smith et al.   AMERICAN JOURNAL OF BOTANY

Can we build it? Yes we can, but should we use it? Assessing the quality and value of a very large phylogeny of campanulid angiosperms

(2018) Jeremy M. Beaulieu et al.   AMERICAN JOURNAL OF BOTANY

Conceptual and statistical problems with the DEC+J model of founder-event speciation and its comparison with DEC via model selection

(2018) Richard H. Ree et al.   JOURNAL OF BIOGEOGRAPHY

Rethinking phylogenetic comparative methods

(2018) Josef C Uyeda et al.   SYSTEMATIC BIOLOGY

Inferring Diversification Rate Variation From Phylogenies With Fossils

(2018) Jonathan S. Mitchell et al.   SYSTEMATIC BIOLOGY

Hidden state models improve state-dependent diversification approaches, including biogeographical models

(2018) Daniel S. Caetano et al.   EVOLUTION

Floral uniformity through evolutionary time in a species-rich tree lineage

(2018) Thais N. C. Vasconcelos et al.   NEW PHYTOLOGIST

Estimating diversification rates for higher taxa: BAMM can give problematic estimates of rates and rate shifts

(2017) Andreas L. S. Meyer et al.   EVOLUTION

Plant size: a key determinant of diversification?

(2017) Florian C. Boucher et al.   NEW PHYTOLOGIST

Is BAMM Flawed? Theoretical and Practical Concerns in the Analysis of Multi-Rate Diversification Models

(2017) Daniel L. Rabosky et al.   SYSTEMATIC BIOLOGY

The abiotic and biotic drivers of rapid diversification in Andean bellflowers (Campanulaceae)

(2016) Laura P. Lagomarsino et al.   NEW PHYTOLOGIST

Critically evaluating the theory and performance of Bayesian analysis of macroevolutionary mixtures

(2016) Brian R. Moore et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Detecting Hidden Diversification Shifts in Models of Trait-Dependent Speciation and Extinction

(2016) Jeremy M. Beaulieu et al.   SYSTEMATIC BIOLOGY

Challenges in the estimation of extinction from molecular phylogenies: A response to Beaulieu and O'Meara

(2015) Daniel L. Rabosky   EVOLUTION

Extinction can be estimated from moderately sized molecular phylogenies

(2015) Jeremy M. Beaulieu et al.   EVOLUTION

No substitute for real data: A cautionary note on the use of phylogenies from birth-death polytomy resolvers for downstream comparative analyses

(2015) Daniel L. Rabosky   EVOLUTION

Confluence, synnovation, and depauperons in plant diversification

(2015) Michael J. Donoghue et al.   NEW PHYTOLOGIST

Model Inadequacy and Mistaken Inferences of Trait-Dependent Speciation

(2015) Daniel L. Rabosky et al.   SYSTEMATIC BIOLOGY

A Robust Semi-Parametric Test for Detecting Trait-Dependent Diversification

(2015) Daniel L. Rabosky et al.   SYSTEMATIC BIOLOGY

Fast demographic traits promote high diversification rates of Amazonian trees

(2014) Timothy R. Baker et al.   ECOLOGY LETTERS

Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees

(2014) Daniel L. Rabosky   PLoS One

The Unsolved Challenge to Phylogenetic Correlation Tests for Categorical Characters

(2014) Wayne P. Maddison et al.   SYSTEMATIC BIOLOGY

The global diversity of birds in space and time

(2012) W. Jetz et al.   NATURE

Seeing the Forest for the Trees: The Limitations of Phylogenies in Comparative Biology

(2011) Jonathan B. Losos   AMERICAN NATURALIST

Has the Earth’s sixth mass extinction already arrived?

(2011) Anthony D. Barnosky et al.   NATURE

Body Size Evolution in Mammals: Complexity in Tempo and Mode

(2010) Natalie Cooper et al.   AMERICAN NATURALIST

The expected length of pendant and interior edges of a Yule tree

(2010) Mike Steel et al.   APPLIED MATHEMATICS LETTERS

Species Selection Maintains Self-Incompatibility

(2010) E. E. Goldberg et al.   SCIENCE

Quantitative Traits and Diversification

(2010) Richard G. FitzJohn   SYSTEMATIC BIOLOGY

Relating Traits to Diversification: A Simple Test

(2008) Robert P. Freckleton et al.   AMERICAN NATURALIST