Arbuscular mycorrhizal fungi community linkages to soil nutrient availability across contrasting agroecosystems

A comparison of the arbuscular mycorrhizal fungal communities among Bangladeshi modern high yielding and traditional rice varieties

(2021) Shanaz Parvin et al.   PLANT AND SOIL

Perennial grain cropping enhances the soil methane sink in temperate agroecosystems

(2021) Keunbae Kim et al.   GEODERMA

CH4 uptake along a successional gradient in temperate alpine soils

(2020) Cole G. Brachmann et al.   BIOGEOCHEMISTRY

Forage Rotations Conserve Diversity of Arbuscular Mycorrhizal Fungi and Soil Fertility

(2020) Elisa Pellegrino et al.   Frontiers in Microbiology

Impact of Phosphorus Fertilization on Tomato Growth and Arbuscular Mycorrhizal Fungal Communities

(2020) Masao Higo et al.   Microorganisms

Elevation gradients affect the differences of arbuscular mycorrhizal fungi diversity between root and rhizosphere soil

(2020) Fazhu Zhao et al.   AGRICULTURAL AND FOREST METEOROLOGY

Productivity and soil quality of organic forage, quinoa, and grain cropping systems in the dryland Pacific Northwest, USA

(2020) Rachel A. Wieme et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Taxonomic assignment of arbuscular mycorrhizal fungi in an 18S metagenomic dataset: a case study with saltcedar (Tamarix aphylla)

(2020) Franck Stefani et al.   MYCORRHIZA

Crop types have stronger effects on soil microbial communities and functionalities than biochar or fertilizer during two cycles of legume-cereal rotations of dry land

(2020) Muhammad Azeem et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Arbuscular mycorrhizal fungal community was affected by tillage practices rather than residue management in black soil of northeast China

(2020) Siyu Gu et al.   SOIL & TILLAGE RESEARCH

Amplicon sequencing analysis of arbuscular mycorrhizal fungal communities colonizing maize roots in different cover cropping and tillage systems

(2020) Masao Higo et al.   Scientific Reports

Arbuscular mycorrhizal fungal communities in the rhizospheric soil of litchi and mango orchards as affected by geographic distance, soil properties and manure input

(2020) Shangtao Jiang et al.   APPLIED SOIL ECOLOGY

Changes in microbial community structure and physiological profile in a kaolinitic tropical soil under different conservation agricultural practices

(2020) Lucas Dantas Lopes et al.   APPLIED SOIL ECOLOGY

The rhizosphere and cropping system, but not arbuscular mycorrhizae, affect ammonia oxidizing archaea and bacteria abundances in two agricultural soils

(2020) Cassandra J. Wattenburger et al.   APPLIED SOIL ECOLOGY

Sources and priming of soil N2O and CO2 production: Nitrogen and simulated exudate additions

(2020) Erin J. Daly et al.   SOIL BIOLOGY & BIOCHEMISTRY

Nitrogen Type and Availability Drive Mycorrhizal Effects on Wheat Performance, Nitrogen Uptake and Recovery, and Production Sustainability

(2020) Rosolino Ingraffia et al.   Frontiers in Plant Science

Small-scale soil heterogeneity affects the distribution of arbuscular mycorrhizal fungal species in a hot-spot field in a Mediterranean site

(2020) Luciano Avio et al.   APPLIED SOIL ECOLOGY

Soil labile organic carbon sequestration is tightly correlated with the abundance and diversity of arbuscular mycorrhizal fungi in semiarid maize fields

(2020) Ai‐Tian Ren et al.   LAND DEGRADATION & DEVELOPMENT

Increased nitrogen use efficiency in crop production can provide economic and environmental benefits

(2020) Matthew Langholtz et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Cover cropping can be a stronger determinant than host crop identity for arbuscular mycorrhizal fungal communities colonizing maize and soybean

(2019) Masao Higo et al.   PeerJ

Impact of Nitrogen Fertilizer on the Mycorrhizal Inoculating Potential and Fungal Community Structure in Rhizosphere of Medicinal Plant Curcuma longa L.

(2019) Chi K. Hoang et al.   GEOMICROBIOLOGY JOURNAL

Fungal community assembly in soils and roots under plant invasion and nitrogen deposition

(2019) Michala L. Phillips et al.   Fungal Ecology

The cover crop determines the AMF community composition in soil and in roots of maize after a ten-year continuous crop rotation

(2019) C. Hontoria et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Host identity and functional traits determine the community composition of the arbuscular mycorrhizal fungi in facultative epiphytic plant species

(2019) M.M. Alguacil et al.   Fungal Ecology

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Interaction Between Conservation Tillage and Nitrogen Fertilization Shapes Prokaryotic and Fungal Diversity at Different Soil Depths: Evidence From a 23-Year Field Experiment in the Mediterranean Area

(2019) Gaia Piazza et al.   Frontiers in Microbiology

Nitrogen input through chemical and biological pathway affects arbuscular mycorrhizal fungal communities in forage grass cultivation in southwest China

(2019) Dan Xiao et al.   APPLIED SOIL ECOLOGY

Genotype and soil water availability shape the composition of AMF communities at chickpea early growth stages

(2019) A. Kavadia et al.   APPLIED SOIL ECOLOGY

Arbuscular mycorrhizal fungal community differentiation along a post-coal mining reclamation chronosequence in South Africa: A potential indicator of ecosystem recovery

(2019) Obinna T. Ezeokoli et al.   APPLIED SOIL ECOLOGY

Geography and habitat predominate over climate influences on arbuscular mycorrhizal fungal communities of mid-European meadows

(2019) Veronika Řezáčová et al.   MYCORRHIZA

Soil carbon storage informed by particulate and mineral-associated organic matter

(2019) M. Francesca Cotrufo et al.   Nature Geoscience

Organic management and cover crop species steer soil microbial community structure and functionality along with soil organic matter properties

(2018) Laura B. Martínez-García et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Plant growth stages and fertilization regimes drive soil fungal community compositions in a wheat-rice rotation system

(2018) Jichen Wang et al.   BIOLOGY AND FERTILITY OF SOILS

Managing for Multifunctionality in Perennial Grain Crops

(2018) Matthew R Ryan et al.   BIOSCIENCE

Microbial communities in soil profile are more responsive to legacy effects of wheat-cover crop rotations than tillage systems

(2018) Anil Somenahally et al.   SOIL BIOLOGY & BIOCHEMISTRY

Cooperation of earthworm and arbuscular mycorrhizae enhanced plant N uptake by balancing absorption and supply of ammonia

(2018) Xinxing He et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effect of winter wheat cover cropping with no-till cultivation on the community structure of arbuscular mycorrhizal fungi colonizing the subsequent soybean

(2018) Sho Morimoto et al.   SOIL SCIENCE AND PLANT NUTRITION

Can phosphorus application and cover cropping alter arbuscular mycorrhizal fungal communities and soybean performance after a five-year phosphorus-unfertilized crop rotational system?

(2018) Masao Higo et al.   PeerJ

Mycorrhizal fungal community structure in tropical humid soils under fallow and cropping conditions

(2018) Martin Jemo et al.   Scientific Reports

Effects of Short- and Long-Term Variation in Resource Conditions on Soil Fungal Communities and Plant Responses to Soil Biota

(2018) Philip G. Hahn et al.   Frontiers in Plant Science

Soil mycorrhizal and nematode diversity vary in response to bioenergy crop identity and fertilization

(2017) Sarah M. Emery et al.   Global Change Biology Bioenergy

Exploring the symbiont diversity of ancient western redcedars: arbuscular mycorrhizal fungi of long-lived hosts

(2017) Monika A. Gorzelak et al.   MOLECULAR ECOLOGY

The effect of deep tillage on crop yield – What do we really know?

(2017) Florian Schneider et al.   SOIL & TILLAGE RESEARCH

Barcoded NS31/AML2 Primers for Sequencing of Arbuscular Mycorrhizal Communities in Environmental Samples

(2017) Benjamin S. T. Morgan et al.   Applications in Plant Sciences

The abundance and diversity of arbuscular mycorrhizal fungi are linked to the soil chemistry of screes and to slope in the Alpic paleo-endemic Berardia subacaulis

(2017) Gabriele Casazza et al.   PLoS One

Selection of fungi by candidate cover crops

(2016) Maria-Soledad Benitez et al.   APPLIED SOIL ECOLOGY

Quantity and distribution of arbuscular mycorrhizal fungal storage organs within dead roots

(2016) Anja Müller et al.   MYCORRHIZA

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Long-term agricultural fertilization alters arbuscular mycorrhizal fungal community composition and barley (Hordeum vulgare) mycorrhizal carbon and phosphorus exchange

(2016) Alwyn Williams et al.   NEW PHYTOLOGIST

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Introduction of various cover crop species to improve soil biological P parameters and P uptake of the following crops

(2015) Toshihiko Karasawa et al.   NUTRIENT CYCLING IN AGROECOSYSTEMS

Temporal variation of the molecular diversity of arbuscular mycorrhizal communities in three different winter cover crop rotational systems

(2014) Masao Higo et al.   BIOLOGY AND FERTILITY OF SOILS

Contrasting effects of cover crops on ‘hot spot’ arbuscular mycorrhizal fungal communities in organic tomato

(2014) Ezekiel Mugendi Njeru et al.   BIOLOGY AND FERTILITY OF SOILS

Spatial and temporal structuring of arbuscular mycorrhizal communities is differentially influenced by abiotic factors and host crop in a semi-arid prairie agroecosystem

(2014) Luke D. Bainard et al.   FEMS MICROBIOLOGY ECOLOGY

Evaluation of six primer pairs targeting the nuclear rRNA operon for characterization of arbuscular mycorrhizal fungal (AMF) communities using 454 pyrosequencing

(2014) Maarten Van Geel et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Arbuscular Mycorhizal Fungi Associated with the Olive Crop across the Andalusian Landscape: Factors Driving Community Differentiation

(2014) Miguel Montes-Borrego et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Impact of weed control on arbuscular mycorrhizal fungi in a tropical agroecosystem: a long-term experiment

(2012) José A. Ramos-Zapata et al.   MYCORRHIZA

Impact of tillage system on arbuscular mycorrhiza fungal communities in the soil under Mediterranean conditions

(2012) Isabel Brito et al.   SOIL & TILLAGE RESEARCH

The online database MaarjAM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota)

(2010) M. Öpik et al.   NEW PHYTOLOGIST

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION