Correlation Analysis between Gut Microbiota Alterations and the Cytokine Response in Patients with Coronavirus Disease during Hospitalization

Gut microbiota composition reflects disease severity and dysfunctional immune responses in patients with COVID-19

(2021) Yun Kit Yeoh et al.   GUT

Six-month follow-up of gut microbiota richness in patients with COVID-19

(2021) Yanfei Chen et al.   GUT

Post-acute COVID-19 syndrome

(2021) Ani Nalbandian et al.   NATURE MEDICINE

The human microbiome and COVID-19: A systematic review

(2021) Shinya Yamamoto et al.   PLoS One

Unique Gut Microbiome in HIV Patients on Antiretroviral Therapy (ART) Suggests Association with Chronic Inflammation

(2021) Aya Ishizaka et al.   Microbiology Spectrum

Gut Dysbiosis and IL-21 Response in Patients with Severe COVID-19

(2021) Mahejibin Khan et al.   Microorganisms

Interaction between microbiota and immunity in health and disease

(2020) Danping Zheng et al.   CELL RESEARCH

Alterations in Gut Microbiota of Patients With COVID-19 During Time of Hospitalization

(2020) Tao Zuo et al.   GASTROENTEROLOGY

Gastrointestinal symptoms of 95 cases with SARS-CoV-2 infection

(2020) Lu Lin et al.   GUT

The presence of SARS‐CoV‐2 RNA in the feces of COVID‐19 patients

(2020) Yifei Chen et al.   JOURNAL OF MEDICAL VIROLOGY

Mild or Moderate Covid-19

(2020) Rajesh T. Gandhi et al.   NEW ENGLAND JOURNAL OF MEDICINE

SARS-CoV-2 productively infects human gut enterocytes

(2020) Mart M. Lamers et al.   SCIENCE

A case of COVID-19 patient with the diarrhea as initial symptom and literature review

(2020) Xiaodong Yang et al.   Clinics and Research in Hepatology and Gastroenterology

Depicting SARS-CoV-2 faecal viral activity in association with gut microbiota composition in patients with COVID-19

(2020) Tao Zuo et al.   GUT

Metagenomic Next-Generation Sequencing of Nasopharyngeal Specimens Collected from Confirmed and Suspect COVID-19 Patients

(2020) Heba H. Mostafa et al.   mBio

Autoimmunity-Associated Gut Commensals Modulate Gut Permeability and Immunity in Humanized Mice

(2019) Baskar Balakrishnan et al.   MILITARY MEDICINE

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

The Gut Microbiota in the Pathogenesis and Therapeutics of Inflammatory Bowel Disease

(2018) Tao Zuo et al.   Frontiers in Microbiology

Analysis of Microbiome Data in the Presence of Excess Zeros

(2017) Abhishek Kaul et al.   Frontiers in Microbiology

Colonic Butyrate-Producing Communities in Humans: an Overview Using Omics Data

(2017) Marius Vital et al.   mSystems

Effects of Antibiotics on Gut Microbiota

(2016) Kathleen Lange et al.   DIGESTIVE DISEASES

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Immunopathogenesis of IBD: current state of the art

(2015) Heitor S. P. de Souza et al.   Nature Reviews Gastroenterology & Hepatology

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Role of the Microbiota in Immunity and Inflammation

(2014) Yasmine Belkaid et al.   CELL

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY