System-Wide Analysis of the GATC-Binding Nucleoid-Associated Protein Gbn and Its Impact on Streptomyces Development
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
System-Wide Analysis of the GATC-Binding Nucleoid-Associated Protein Gbn and Its Impact on
Streptomyces
Development
Authors
Keywords
-
Journal
mSystems
Volume -, Issue -, Pages -
Publisher
American Society for Microbiology
Online
2022-05-16
DOI
10.1128/msystems.00061-22
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Spatial rearrangement of the Streptomyces venezuelae linear chromosome during sporogenic development
- (2021) Marcin J. Szafran et al. Nature Communications
- When is a transcription factor a NAP?
- (2020) Charles J Dorman et al. CURRENT OPINION IN MICROBIOLOGY
- BldC Delays Entry into Development To Produce a Sustained Period of Vegetative Growth in Streptomyces venezuelae
- (2019) Matthew J. Bush et al. mBio
- Silencing cryptic specialized metabolism in Streptomyces by the nucleoid-associated protein Lsr2
- (2019) Emma J Gehrke et al. eLife
- Chromosome organization in bacteria: mechanistic insights into genome structure and function
- (2019) Remus T. Dame et al. NATURE REVIEWS GENETICS
- Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins
- (2019) Liang Qin et al. NUCLEIC ACIDS RESEARCH
- OUP accepted manuscript
- (2018) BIOINFORMATICS
- Regulation of antibiotic production in Actinobacteria: new perspectives from the post-genomic era
- (2018) Helga U. van der Heul et al. NATURAL PRODUCT REPORTS
- HMMER web server: 2018 update
- (2018) Simon C Potter et al. NUCLEIC ACIDS RESEARCH
- Sporulation-specific cell division defects in ylmE mutants of Streptomyces coelicolor are rescued by additional deletion of ylmD
- (2018) Le Zhang et al. Scientific Reports
- Heavy-tailed prior distributions for sequence count data: removing the noise and preserving large differences
- (2018) Anqi Zhu et al. BIOINFORMATICS
- The Pfam protein families database in 2019
- (2018) Sara El-Gebali et al. NUCLEIC ACIDS RESEARCH
- Mechanism of environmentally driven conformational changes that modulate H-NS DNA-bridging activity
- (2017) Ramon A van der Valk et al. eLife
- Assembly of the Escherichia coli NADH:ubiquinone oxidoreductase (respiratory complex I)
- (2016) Thorsten Friedrich et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Intertwining nutrient-sensory networks and the control of antibiotic production inStreptomyces
- (2016) Mia Urem et al. MOLECULAR MICROBIOLOGY
- Transcriptional analysis of the cell division-related ssg genes in Streptomyces coelicolor reveals direct control of ssgR by AtrA
- (2015) Songhee H. Kim et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Taxonomy, Physiology, and Natural Products of Actinobacteria
- (2015) Essaid Ait Barka et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- The I-TASSER Suite: protein structure and function prediction
- (2015) Jianyi Yang et al. NATURE METHODS
- The two kinases, AbrC1 and AbrC2, of the atypical two-component system AbrC are needed to regulate antibiotic production and differentiation in Streptomyces coelicolor
- (2015) Héctor RodrÃguez et al. Frontiers in Microbiology
- Effect of Temperature on the Intrinsic Flexibility of DNA and Its Interaction with Architectural Proteins
- (2014) Rosalie P. C. Driessen et al. BIOCHEMISTRY
- Bacterial solutions to multicellularity: a tale of biofilms, filaments and fruiting bodies
- (2014) Dennis Claessen et al. NATURE REVIEWS MICROBIOLOGY
- High-Efficiency Multiplex Genome Editing of Streptomyces Species Using an Engineered CRISPR/Cas System
- (2014) Ryan E. Cobb et al. ACS Synthetic Biology
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- Proteomic survey of the Streptomyces coelicolor nucleoid
- (2013) Elizabeth Bradshaw et al. Journal of Proteomics
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Competition between the GlnR and PhoP regulators for the glnA and amtB promoters in Streptomyces coelicolor
- (2012) Alberto Sola-Landa et al. NUCLEIC ACIDS RESEARCH
- NCBI GEO: archive for functional genomics data sets—update
- (2012) Tanya Barrett et al. NUCLEIC ACIDS RESEARCH
- A novel function of Streptomyces integration host factor (sIHF) in the control of antibiotic production and sporulation in Streptomyces coelicolor
- (2011) Yung-Hun Yang et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Pybedtools: a flexible Python library for manipulating genomic datasets and annotations
- (2011) Ryan K. Dale et al. BIOINFORMATICS
- MEME-ChIP: motif analysis of large DNA datasets
- (2011) Philip Machanick et al. BIOINFORMATICS
- Positive control of cell division: FtsZ is recruited by SsgB during sporulation of Streptomyces
- (2011) J. Willemse et al. GENES & DEVELOPMENT
- Functional Analysis of the N-Acetylglucosamine Metabolic Genes of Streptomyces coelicolor and Role in Control of Development and Antibiotic Production
- (2011) M. A. Swiatek et al. JOURNAL OF BACTERIOLOGY
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- Genome-wide inference of regulatory networks in Streptomyces coelicolor
- (2010) Marlene Castro-Melchor et al. BMC GENOMICS
- The dynamic architecture of the metabolic switch in Streptomyces coelicolor
- (2010) Kay Nieselt et al. BMC GENOMICS
- Activation of the SoxR Regulon in Streptomyces coelicolor by the Extracellular Form of the Pigmented Antibiotic Actinorhodin
- (2010) J.-H. Shin et al. JOURNAL OF BACTERIOLOGY
- Bacterial nucleoid-associated proteins, nucleoid structure and gene expression
- (2010) Shane C. Dillon et al. NATURE REVIEWS MICROBIOLOGY
- Cleavage of Phosphorothioated DNA and Methylated DNA by the Type IV Restriction Endonuclease ScoMcrA
- (2010) Guang Liu et al. PLoS Genetics
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Biopython: freely available Python tools for computational molecular biology and bioinformatics
- (2009) P. J. A. Cock et al. BIOINFORMATICS
- Characterization of the methyl-specific restriction system ofStreptomyces coelicolorA3(2) and of the role played by laterally acquired nucleases
- (2009) Gabriela González-Cerón et al. FEMS MICROBIOLOGY LETTERS
- One of the Two Genes Encoding Nucleoid-Associated HU Proteins in Streptomyces coelicolor Is Developmentally Regulated and Specifically Involved in Spore Maturation
- (2009) P. Salerno et al. JOURNAL OF BACTERIOLOGY
- Functional expression of the Cre recombinase in actinomycetes
- (2008) Marta Fedoryshyn et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- The use of the rare UUA codon to define “Expression Space” for genes involved in secondary metabolism, development and environmental adaptation in Streptomyces
- (2008) Keith F. Chater et al. JOURNAL OF MICROBIOLOGY
- Streptomyces morphogenetics: dissecting differentiation in a filamentous bacterium
- (2008) Klas Flärdh et al. NATURE REVIEWS MICROBIOLOGY
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now