Identification of autosomal cis expression quantitative trait methylation (cis eQTMs) in children’s blood

Epigenome-wide change and variation in DNA methylation in childhood: Trajectories from birth to late adolescence

(2021) Rosa H Mulder et al.   HUMAN MOLECULAR GENETICS

Expression Quantitative Trait Methylation Analysis Reveals Methylomic Associations With Gene Expression in Childhood Asthma

(2020) Soyeon Kim et al.   CHEST

Multi‐omics integrative analysis identified SNP‐methylation‐mRNA: Interaction in peripheral blood mononuclear cells

(2019) Yi‐Hua Lu et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

Integrative analysis of gene expression, DNA methylation, physiological traits, and genetic variation in human skeletal muscle

(2019) D. Leland Taylor et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight

(2019) Leanne K. Küpers et al.   Nature Communications

Methylome-wide association study provides evidence of particulate matter air pollution-associated DNA methylation

(2019) Rahul Gondalia et al.   ENVIRONMENT INTERNATIONAL

Advances in epigenetics link genetics to the environment and disease

(2019) Giacomo Cavalli et al.   NATURE

An integrated -omics analysis of the epigenetic landscape of gene expression in human blood cells

(2018) Elizabeth M. Kennedy et al.   BMC GENOMICS

Using an atlas of gene regulation across 44 human tissues to inform complex disease- and trait-associated variation

(2018) Eric R. Gamazon et al.   NATURE GENETICS

The Key Role of Epigenetics in Human Disease Prevention and Mitigation

(2018) Andrew P. Feinberg   NEW ENGLAND JOURNAL OF MEDICINE

Integrative analysis of omics summary data reveals putative mechanisms underlying complex traits

(2018) Yang Wu et al.   Nature Communications

Human Early Life Exposome (HELIX) study: a European population-based exposome cohort

(2018) Léa Maitre et al.   BMJ Open

EWAS Atlas: a curated knowledgebase of epigenome-wide association studies

(2018) Mengwei Li et al.   NUCLEIC ACIDS RESEARCH

Genetic variants influence on the placenta regulatory landscape

(2018) Fabien Delahaye et al.   PLoS Genetics

Smoking induces coordinated DNA methylation and gene expression changes in adipose tissue with consequences for metabolic health

(2018) Pei-Chien Tsai et al.   Clinical Epigenetics

Non-linear patterns in age-related DNA methylation may reflect CD4+ T cell differentiation

(2017) Nicholas D. Johnson et al.   Epigenetics

Maternal BMI at the start of pregnancy and offspring epigenome-wide DNA methylation: findings from the pregnancy and childhood epigenetics (PACE) consortium

(2017) Gemma C Sharp et al.   HUMAN MOLECULAR GENETICS

Cohort Profile: Pregnancy And Childhood Epigenetics (PACE) Consortium

(2017) Janine F Felix et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Cohort Profile: The Mother-Child Cohort in Crete, Greece (Rhea Study)

(2017) Leda Chatzi et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Associating cellular epigenetic models with human phenotypes

(2017) Tuuli Lappalainen et al.   NATURE REVIEWS GENETICS

Cohort Profile Update: The Norwegian Mother and Child Cohort Study (MoBa)

(2016) Per Magnus et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Reference-based phasing using the Haplotype Reference Consortium panel

(2016) Po-Ru Loh et al.   NATURE GENETICS

A reference panel of 64,976 haplotypes for genotype imputation

(2016)   NATURE GENETICS

Next-generation genotype imputation service and methods

(2016) Sayantan Das et al.   NATURE GENETICS

Disease variants alter transcription factor levels and methylation of their binding sites

(2016) Marc Jan Bonder et al.   NATURE GENETICS

Genetic and environmental influences interact with age and sex in shaping the human methylome

(2016) Jenny van Dongen et al.   Nature Communications

Patterns of gene expression and DNA methylation in human fetal and adult liver

(2015) Susan M. Huse et al.   BMC GENOMICS

Cohort Profile: The EDEN mother-child cohort on the prenatal and early postnatal determinants of child health and development

(2015) Barbara Heude et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Integrative analysis of 111 reference human epigenomes

(2015) Anshul Kundaje et al.   NATURE

The human transcriptome across tissues and individuals

(2015) M. Mele et al.   SCIENCE

Tissue-Specific Effects of Genetic and Epigenetic Variation on Gene Regulation and Splicing

(2015) Maria Gutierrez-Arcelus et al.   PLoS Genetics

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

minimac2: faster genotype imputation

(2014) Christian Fuchsberger et al.   BIOINFORMATICS

massiR : a method for predicting the sex of samples in gene expression microarray datasets

(2014) Sam Buckberry et al.   BIOINFORMATICS

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays

(2014) Martin J. Aryee et al.   BIOINFORMATICS

MethylAid: visual and interactive quality control of large Illumina 450k datasets

(2014) M. van Iterson et al.   BIOINFORMATICS

Genetic and epigenetic regulation of gene expression in fetal and adult human livers

(2014) Marc Bonder et al.   BMC GENOMICS

The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts

(2014) James R Wagner et al.   GENOME BIOLOGY

Methylomics of gene expression in human monocytes

(2013) Yongmei Liu et al.   HUMAN MOLECULAR GENETICS

Passive and active DNA methylation and the interplay with genetic variation in gene regulation

(2013) Maria Gutierrez-Arcelus et al.   eLife

Matrix eQTL: ultra fast eQTL analysis via large matrix operations

(2012) A. A. Shabalin   BIOINFORMATICS

DNA methylation arrays as surrogate measures of cell mixture distribution

(2012) Eugene Houseman et al.   BMC BIOINFORMATICS

Cohort Profile: The Born in Bradford multi-ethnic family cohort study

(2012) J. Wright et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Functions of DNA methylation: islands, start sites, gene bodies and beyond

(2012) Peter A. Jones   NATURE REVIEWS GENETICS

Differential DNA Methylation in Purified Human Blood Cells: Implications for Cell Lineage and Studies on Disease Susceptibility

(2012) Lovisa E. Reinius et al.   PLoS One

Cohort Profile: The INMA—INfancia y Medio Ambiente—(Environment and Childhood) Project

(2011) Mònica Guxens et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Maternal Smoking,GSTM1 and GSTT1 Polymorphism and Susceptibility to Adverse Pregnancy Outcomes

(2009) Regina Grazuleviciene et al.   International Journal of Environmental Research and Public Health

Estimation of significance thresholds for genomewide association scans

(2008) Frank Dudbridge et al.   GENETIC EPIDEMIOLOGY