Antimicrobial resistance and population genomics of multidrug-resistant Escherichia coli in pig farms in mainland China
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Antimicrobial resistance and population genomics of multidrug-resistant Escherichia coli in pig farms in mainland China
Authors
Keywords
-
Journal
Nature Communications
Volume 13, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2022-03-02
DOI
10.1038/s41467-022-28750-6
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Prevalence and Molecular Characterization of Antimicrobial-Resistant Escherichia coli in Pig Farms, Slaughterhouses, and Terminal Markets in Henan Province of China
- (2021) Zizhe Hu et al. Foodborne Pathogens and Disease
- Tigecycline efflux in Acinetobacter baumannii is mediated by TetA in synergy with RND-type efflux transporters
- (2020) Wuen Ee Foong et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Factors Obscuring the Role of E. coli from Domestic Animals in the Global Antimicrobial Resistance Crisis: An Evidence-Based Review
- (2020) Fernanda Loayza et al. International Journal of Environmental Research and Public Health
- Contaminated in-house environment contributes to the persistence and transmission of NDM-producing bacteria in a Chinese poultry farm
- (2020) Ruidong Zhai et al. ENVIRONMENT INTERNATIONAL
- Changes in colistin resistance and mcr-1 abundance in Escherichia coli of animal and human origins following the ban of colistin-positive additives in China: an epidemiological comparative study
- (2020) Yang Wang et al. LANCET INFECTIOUS DISEASES
- Whole Genome Sequencing Analysis of Porcine Faecal Commensal Escherichia coli Carrying Class 1 Integrons from Sows and Their Offspring
- (2020) Tiziana Zingali et al. Microorganisms
- Genomic epidemiology of animal-derived tigecycline-resistant Escherichia coli across China reveals recent endemic plasmid-encoded tet(X4) gene
- (2020) Chengtao Sun et al. Communications Biology
- Emergence of plasmid-mediated high-level tigecycline resistance genes in animals and humans
- (2019) Tao He et al. Nature Microbiology
- Plasmid-encoded tet(X) genes that confer high-level tigecycline resistance in Escherichia coli
- (2019) Jian Sun et al. Nature Microbiology
- Antibiotic Application and Resistance in Swine Production in China: Current Situation and Future Perspectives
- (2019) Hong Yang et al. Frontiers in Veterinary Science
- Global trends in antimicrobial resistance in animals in low- and middle-income countries
- (2019) Thomas P. Van Boeckel et al. SCIENCE
- Frequency of Diarrheagenic Virulence Genes and Characteristics in Escherichia coli Isolates from Pigs with Diarrhea in China
- (2019) Gui-Yan Yang et al. Microorganisms
- Complete Sequence of a tet(X4)-Harboring IncX1 Plasmid, pYY76-1-2, in Escherichia coli from a Cow Sample in China
- (2019) Chong Chen et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Characteristics of Carbapenem-Resistant and Colistin-Resistant Escherichia coli Co-Producing NDM-1 and MCR-1 from Pig Farms in China
- (2019) Peng et al. Microorganisms
- Use of whole genome sequencing of commensal Escherichia coli in pigs for antimicrobial resistance surveillance, United Kingdom, 2018
- (2019) Emma Stubberfield et al. Eurosurveillance
- Parallelization of MAFFT for large-scale multiple sequence alignments
- (2018) Tsukasa Nakamura et al. BIOINFORMATICS
- Antimicrobial Susceptibility of Escherichia coli and Salmonella spp. Isolates From Healthy Pigs in Australia: Results of a Pilot National Survey
- (2018) Amanda K. Kidsley et al. Frontiers in Microbiology
- Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species
- (2018) Zhong Peng et al. Frontiers in Microbiology
- Dissemination of blaNDM-5 gene via an IncX3-type plasmid among non-clonal Escherichia coli in China
- (2018) Xi Li et al. Antimicrobial Resistance and Infection Control
- GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens
- (2018) Zhemin Zhou et al. GENOME RESEARCH
- Enumerating the economic cost of antimicrobial resistance per antibiotic consumed to inform the evaluation of interventions affecting their use
- (2018) Poojan Shrestha et al. Antimicrobial Resistance and Infection Control
- Escherichia coli used as a biomarker of antimicrobial resistance in pig farms of Southern Brazil
- (2018) Maiara Cristiane Brisola et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Reducing antimicrobial use in food animals
- (2017) Thomas P. Van Boeckel et al. SCIENCE
- Global phylogenetic analysis of Escherichia coli and plasmids carrying the mcr-1 gene indicates bacterial diversity but plasmid restriction
- (2017) Sébastien Matamoros et al. Scientific Reports
- IncFII Conjugative Plasmid-Mediated Transmission of bla NDM-1 Elements among Animal-Borne Escherichia coli Strains
- (2016) Dachuan Lin et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Carbapenem-resistant and colistin-resistant Escherichia coli co-producing NDM-9 and MCR-1
- (2016) Xu Yao et al. LANCET INFECTIOUS DISEASES
- Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study
- (2016) Yi-Yun Liu et al. LANCET INFECTIOUS DISEASES
- Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
- (2016) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- Consumption of meat and dairy products in China: a review
- (2016) Yuna He et al. PROCEEDINGS OF THE NUTRITION SOCIETY
- Co-transfer of blaNDM-5 and mcr-1 by an IncX3–X4 hybrid plasmid in Escherichia coli
- (2016) Jian Sun et al. Nature Microbiology
- Comprehensive Evaluation of Antibiotics Emission and Fate in the River Basins of China: Source Analysis, Multimedia Modeling, and Linkage to Bacterial Resistance
- (2015) Qian-Qian Zhang et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data
- (2015) Katrine G. Joensen et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Antimicrobial use in Chinese swine and broiler poultry production
- (2015) Vikram Krishnasamy et al. Antimicrobial Resistance and Infection Control
- In SilicoDetection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
- (2014) Alessandra Carattoli et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution
- (2014) Michael R Gillings et al. ISME Journal
- Dissemination of Cephalosporin Resistance Genes between Escherichia coli Strains from Farm Animals and Humans by Specific Plasmid Lineages
- (2014) Mark de Been et al. PLoS Genetics
- Recent Advances in Understanding Enteric Pathogenic Escherichia coli
- (2013) M. A. Croxen et al. CLINICAL MICROBIOLOGY REVIEWS
- Diverse and abundant antibiotic resistance genes in Chinese swine farms
- (2013) Yong-Guan Zhu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identification of acquired antimicrobial resistance genes
- (2012) E. Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Easyfig: a genome comparison visualizer
- (2011) M. J. Sullivan et al. BIOINFORMATICS
- BIGSdb: Scalable analysis of bacterial genome variation at the population level
- (2011) Keith A Jolley et al. BMC BIOINFORMATICS
- BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
- (2011) Nabil-Fareed Alikhan et al. BMC GENOMICS
- Emergence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemiological study
- (2010) Karthikeyan K Kumarasamy et al. LANCET INFECTIOUS DISEASES
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- Pathogenomics of the Virulence Plasmids of Escherichia coli
- (2009) T. J. Johnson et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More