Vegetation restoration facilitates belowground microbial network complexity and recalcitrant soil organic carbon storage in southwest China karst region

Revegetation significantly increased the bacterial-fungal interactions in different successional stages of alpine grasslands on the Qinghai-Tibetan Plateau

(2021) Xiaoxia Gao et al.   CATENA

Significant association between soil dissolved organic matter and soil microbial communities following vegetation restoration in the Loess Plateau

(2021) Huaying Hu et al.   ECOLOGICAL ENGINEERING

Karst rocky desertification diverged the soil residing and the active ectomycorrhizal fungal communities thereby fostering distinctive extramatrical mycelia

(2021) Muhammad Khalid et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Response of soil microbial communities to continuously mono-cropped cucumber under greenhouse conditions in a calcareous soil of north China

(2020) Yingnan Zhao et al.   JOURNAL OF SOILS AND SEDIMENTS

Plant–microbiome interactions: from community assembly to plant health

(2020) Pankaj Trivedi et al.   NATURE REVIEWS MICROBIOLOGY

The response of the soil bacterial community and function to forest succession caused by forest disease

(2020) Zhao‐Lei Qu et al.   FUNCTIONAL ECOLOGY

Crop microbiome and sustainable agriculture

(2020) Brajesh K. Singh et al.   NATURE REVIEWS MICROBIOLOGY

Reforestation accelerates soil organic carbon accumulation: Evidence from microbial biomarkers

(2019) Pengshuai Shao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbiome Applications from Lab to Field: Facing Complexity

(2019) Angela Sessitsch et al.   TRENDS IN PLANT SCIENCE

Effects of the vegetation restoration years on soil microbial community composition and biomass in degraded lands in Changting County, China

(2019) Yonghui Bai et al.   JOURNAL OF FORESTRY RESEARCH

Changes in belowground biodiversity during ecosystem development

(2019) Manuel Delgado-Baquerizo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in roots

(2019) Samiran Banerjee et al.   ISME Journal

Diversity of the microbial community and cultivable protease-producing bacteria in the sediments of the Bohai Sea, Yellow Sea and South China Sea

(2019) Jiang Zhang et al.   PLoS One

Deterministic processes dominate soil microbial community assembly in subalpine coniferous forests on the Loess Plateau

(2019) Pengyu Zhao et al.   PeerJ

Effects of micro-/nano-hydroxyapatite and phytoremediation on fungal community structure in copper contaminated soil

(2019) Wen-hui Zhang et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Microbe-driven chemical ecology: past, present and future

(2019) Ruth Schmidt et al.   ISME Journal

Responses of Soil and Microbial C:N:P Stoichiometry to Vegetation Succession in a Karst Region of Southwest China

(2019) Min Song et al.   Forests

Magnesium and calcium ions: roles in bacterial cell attachment and biofilm structure maturation

(2019) Tianyang Wang et al.   BIOFOULING

Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning

(2019) Cameron Wagg et al.   Nature Communications

The Influence of Land Use Patterns on Soil Bacterial Community Structure in the Karst Graben Basin of Yunnan Province, China

(2019) Jiangmei Qiu et al.   Forests

Rational land-use types in the karst regions of China: Insights from soil organic matter composition and stability

(2018) Jingjing Chang et al.   CATENA

Imbalanced plant stoichiometry at contrasting geologic-derived phosphorus sites in subtropics: the role of microelements and plant functional group

(2018) Jiahao Wen et al.   PLANT AND SOIL

Effects of national ecological restoration projects on carbon sequestration in China from 2001 to 2010

(2018) Fei Lu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A global atlas of the dominant bacteria found in soil

(2018) Manuel Delgado-Baquerizo et al.   SCIENCE

Effect of land use on soil enzyme activities at karst area  in Nanchuan, Chongqing, Southwest China

(2018) Q. Li et al.   PLANT SOIL AND ENVIRONMENT

Variations in carbon-decomposition enzyme activities respond differently to land use change in central China

(2018) Qian Zhang et al.   LAND DEGRADATION & DEVELOPMENT

Linking bacterial and eukaryotic microbiota to litter chemistry: Combining next generation sequencing with 13C CPMAS NMR spectroscopy

(2018) Giuliano Bonanomi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Deterministic influences exceed dispersal effects on hydrologically-connected microbiomes

(2017) Emily B. Graham et al.   ENVIRONMENTAL MICROBIOLOGY

Defining the taxonomic status of described subdivision 3 Acidobacteria: proposal of Bryobacteraceae fam. nov.

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Soil Bacterial Community Structure and Co-occurrence Pattern during Vegetation Restoration in Karst Rocky Desertification Area

(2017) Liang Xue et al.   Frontiers in Microbiology

Changes in Species Diversity Patterns and Spatial Heterogeneity during the Secondary Succession of Grassland Vegetation on the Loess Plateau, China

(2017) Caili Sun et al.   Frontiers in Plant Science

The importance of anabolism in microbial control over soil carbon storage

(2017) Chao Liang et al.   Nature Microbiology

Bacterial communities in oil contaminated soils: Biogeography and co-occurrence patterns

(2016) Shuo Jiao et al.   SOIL BIOLOGY & BIOCHEMISTRY

The nature and dynamics of soil organic matter: Plant inputs, microbial transformations, and organic matter stabilization

(2016) Eldor A. Paul   SOIL BIOLOGY & BIOCHEMISTRY

Direct evidence for microbial-derived soil organic matter formation and its ecophysiological controls

(2016) Cynthia M. Kallenbach et al.   Nature Communications

Multi-stressor impacts on fungal diversity and ecosystem functions in streams: natural vs. anthropogenic stress

(2015) M. Tolkkinen et al.   ECOLOGY

The effect of toxicity of heavy metals contained in tailing sands on the organic carbon metabolic activity of soil microorganisms from different land use types in the karst region

(2015) Qiang Li et al.   Environmental Earth Sciences

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rocky desertification in Southwest China: Impacts, causes, and restoration

(2014) Zhongcheng Jiang et al.   EARTH-SCIENCE REVIEWS

Estimating the soil carbon sequestration potential of China's Grain for Green Project

(2014) Shengwei Shi et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Changes in community assembly may shift the relationship between biodiversity and ecosystem function

(2014) Joseph E. Knelman et al.   Frontiers in Microbiology

Temperature response of litter and soil organic matter decomposition is determined by chemical composition of organic material

(2013) Björn Erhagen et al.   GLOBAL CHANGE BIOLOGY

Interactions of vegetation succession, soil bio-chemical properties and microbial communities in a Karst ecosystem

(2012) Hanhua Zhu et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Stochastic and deterministic assembly processes in subsurface microbial communities

(2012) James C Stegen et al.   ISME Journal

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

The bacterial biogeography of British soils

(2011) Robert I. Griffiths et al.   ENVIRONMENTAL MICROBIOLOGY

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Fungal and bacterial recolonisation of acid and alkaline forest soils following artificial heat treatments

(2011) Gema Bárcenas-Moreno et al.   SOIL BIOLOGY & BIOCHEMISTRY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Changes in soil physico-chemical and microbiological properties during natural succession on abandoned farmland in the Loess Plateau

(2010) Bing Wang et al.   Environmental Earth Sciences

Variable responses of the soil microbial biomass to trace concentrations of 13C-labelled glucose, using 13C-PLFA analysis

(2010) J. A. J. Dungait et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plants, Mycorrhizal Fungi, and Bacteria: A Network of Interactions

(2009) Paola Bonfante et al.   Annual Review of Microbiology

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

China’s Primary Programs of Terrestrial Ecosystem Restoration: Initiation, Implementation, and Challenges

(2009) Runsheng Yin et al.   ENVIRONMENTAL MANAGEMENT

Soil food web structure during ecosystem development after land abandonment

(2008) Remko Holtkamp et al.   APPLIED SOIL ECOLOGY