Using spatio-temporal models of population growth and movement to monitor overlap between human impacts and fish populations

Effective time closures: quantifying the conservation benefits of input control for the Pacific chub mackerel fishery

(2015) Momoko Ichinokawa et al.   ECOLOGICAL APPLICATIONS

The importance of spatial models for estimating the strength of density dependence

(2015) James T. Thorson et al.   ECOLOGY

Catch curve stock-reduction analysis: An alternative solution to the catch equations

(2015) James T. Thorson et al.   FISHERIES RESEARCH

Geostatistical delta-generalized linear mixed models improve precision for estimated abundance indices for West Coast groundfishes

(2015) James T. Thorson et al.   ICES JOURNAL OF MARINE SCIENCE

Spatial distribution of fishes in a Northwest Atlantic ecosystem in relation to risk of predation by a marine mammal

(2015) Douglas P. Swain et al.   JOURNAL OF ANIMAL ECOLOGY

Spatial occupancy models for predicting metapopulation dynamics and viability following reintroduction

(2015) Richard B. Chandler et al.   JOURNAL OF APPLIED ECOLOGY

Spatial factor analysis: a new tool for estimating joint species distributions and correlations in species range

(2015) James T. Thorson et al.   Methods in Ecology and Evolution

Keeping Pace with Climate Change: Stage-Structured Moving-Habitat Models

(2014) Melanie A. Harsch et al.   AMERICAN NATURALIST

Spatial semiparametric models improve estimates of species abundance and distribution

(2014) Andrew Olaf Shelton et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Some explorations of the life history ratios to describe length composition, spawning-per-recruit, and the spawning potential ratio

(2014) A. Hordyk et al.   ICES JOURNAL OF MARINE SCIENCE

Mixed effects: a unifying framework for statistical modelling in fisheries biology

(2014) James T. Thorson et al.   ICES JOURNAL OF MARINE SCIENCE

Integrating scientific guidance into marine spatial planning

(2014) A. Rassweiler et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Understanding co-occurrence by modelling species simultaneously with a Joint Species Distribution Model (JSDM)

(2014) Laura J. Pollock et al.   Methods in Ecology and Evolution

Spatially explicit models for inference about density in unmarked or partially marked populations

(2013) Richard B. Chandler et al.   Annals of Applied Statistics

A perspective on steepness, reference points, and stock assessment

(2013) Marc Mangel et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Detecting temporal trends and environmentally-driven changes in the spatial distribution of bottom fishes and crabs on the eastern Bering Sea shelf

(2013) Stan Kotwicki et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

More than the sum of the parts: forest climate response from joint species distribution models

(2013) James S. Clark et al.   ECOLOGICAL APPLICATIONS

Quantifying effects of abiotic and biotic drivers on community dynamics with multivariate autoregressive (MAR) models

(2013) Stephanie E. Hampton et al.   ECOLOGY

Spawning biomass reference points for exploited marine fishes, incorporating taxonomic and body size information

(2012) James T. Thorson et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Linking fishing mortality reference points to life history traits: an empirical study

(2012) Shijie Zhou et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Spatial capture–recapture models for jointly estimating population density and landscape connectivity

(2012) J. Andrew Royle et al.   ECOLOGY

Model performance analysis for Bayesian biomass dynamics models using bias, precision and reliability metrics

(2012) Kotaro Ono et al.   FISHERIES RESEARCH

A review of integrated analysis in fisheries stock assessment

(2012) Mark N. Maunder et al.   FISHERIES RESEARCH

Stock synthesis: A biological and statistical framework for fish stock assessment and fishery management

(2012) Richard D. Methot et al.   FISHERIES RESEARCH

Spatial surplus production modeling of Atlantic tunas and billfish

(2011) Thomas R. Carruthers et al.   ECOLOGICAL APPLICATIONS

Ecological risk assessment for the effects of fishing

(2011) A.J. Hobday et al.   FISHERIES RESEARCH

An explicit link between Gaussian fields and Gaussian Markov random fields: the stochastic partial differential equation approach

(2011) Finn Lindgren et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Models for Estimating Abundance from Repeated Counts of an Open Metapopulation

(2010) D. Dail et al.   BIOMETRICS

Statistical Agent-Based Models for Discrete Spatio-Temporal Systems

(2010) Mevin B. Hooten et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Geostatistical inference under preferential sampling

(2010) Peter J. Diggle et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES C-APPLIED STATISTICS

Survival of Colonizing Wolves in the Northern Rocky Mountains of the United States, 1982–2004

(2010) Douglas W. Smith et al.   JOURNAL OF WILDLIFE MANAGEMENT

A general science-based framework for dynamical spatio-temporal models

(2010) Christopher K. Wikle et al.   TEST

Sustainability assessment for fishing effects (SAFE) on highly diverse and data-limited fish bycatch in a tropical prawn trawl fishery

(2009) Shijie Zhou et al.   MARINE AND FRESHWATER RESEARCH

Birds track their Grinnellian niche through a century of climate change

(2009) M. W. Tingley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Incorporating Time-Varying Catchability into Population Dynamic Stock Assessment Models

(2009) Michael J. Wilberg et al.   REVIEWS IN FISHERIES SCIENCE

Experience in implementing harvest strategies in Australia's south-eastern fisheries

(2008) Anthony D.M. Smith et al.   FISHERIES RESEARCH