Ecological management model for the improvement of soil fertility through the regulation of rare microbial taxa in tea (Camellia sinensis L.) plantation soils

Specialized metabolic functions of keystone taxa sustain soil microbiome stability

(2021) Weibing Xun et al.   Microbiome

Response of tea yield, quality and soil bacterial characteristics to long-term nitrogen fertilization in an eleven-year field experiment

(2021) Lifeng Ma et al.   APPLIED SOIL ECOLOGY

Crop yield-soil quality balance in double cropping in China’s upland by organic amendments: A meta-analysis

(2021) Peng Li et al.   GEODERMA

Heavy nitrogen application increases soil nitrification through ammonia-oxidizing bacteria rather than archaea in acidic tea (Camellia sinensis L.) plantation soil

(2020) Xiangde Yang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Network analysis reveals the strengthening of microbial interaction in biological soil crust development in the Mu Us Sandy Land, northwestern China

(2020) Hong Zhou et al.   SOIL BIOLOGY & BIOCHEMISTRY

Low external input sustainable agriculture: Winter flooding in rice fields increases bird use, fecal matter and soil health, reducing fertilizer requirements

(2020) Alexandra G. Firth et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Rare taxa maintain the stability of crop mycobiomes and ecosystem functions

(2020) Chao Xiong et al.   ENVIRONMENTAL MICROBIOLOGY

Organic fertilizer reduced carbon and nitrogen in runoff and buffered soil acidification in tea plantations: Evidence in nutrient contents and isotope fractionations

(2020) Shaowen Xie et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Impact of agroecological management on plant diversity and soil-based ecosystem services in pasture and coffee systems in the Atlantic forest of Brazil

(2020) Heitor Mancini Teixeira et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Root microbiome changes with root branching order and root chemistry in peach rhizosphere soil

(2020) Zahida H. Pervaiz et al.   Rhizosphere

Saprotrophic fungal communities in arable soils are strongly associated with soil fertility and stoichiometry

(2020) Qi Ning et al.   APPLIED SOIL ECOLOGY

Salinity Is a Key Determinant for Soil Microbial Communities in a Desert Ecosystem

(2019) Kaoping Zhang et al.   mSystems

Microbial C:N:P stoichiometry and turnover depend on nutrients availability in soil: A 14C, 15N and 33P triple labelling study

(2019) Jie Chen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Long-term nitrogen fertilization indirectly affects soil fungi community structure by changing soil and pruned litter in a subtropical tea (Camellia sinensis L.) plantation in China

(2019) Xiangde Yang et al.   PLANT AND SOIL

IMPACT OF LONG‐TERM FRESHWATER IRRIGATION ON SOIL FERTILITY

(2019) Yu.N. Nikolskii et al.   IRRIGATION AND DRAINAGE

Soil fungal assemblage complexity is dependent on soil fertility and dominated by deterministic processes

(2019) Junjie Guo et al.   NEW PHYTOLOGIST

Co-incorporation of green manure and rice straw improves rice production, soil chemical, biochemical and microbiological properties in a typical paddy field in southern China

(2019) Guopeng Zhou et al.   SOIL & TILLAGE RESEARCH

Rare microbial taxa as the major drivers of ecosystem multifunctionality in long-term fertilized soils

(2019) Qing-Lin Chen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Response of soil microbial communities to agroecological versus conventional systems of extensive agriculture

(2018) Diego N. Chavarria et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Diversifying crop rotation increased metabolic soil diversity and activity of the microbial community

(2018) Luciana D’Acunto et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Effects of long-term nitrogen application on soil acidification and solution chemistry of a tea plantation in China

(2018) Xiang-de Yang et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Effects of long-term pig manure application on antibiotics, abundance of antibiotic resistance genes (ARGs), anammox and denitrification rates in paddy soils

(2018) M. Mizanur Rahman et al.   ENVIRONMENTAL POLLUTION

Spatial and temporal microscale pH change at the soil-biochar interface

(2018) Wolfram Buss et al.   GEODERMA

Mortierella elongata 's roles in organic agriculture and crop growth promotion in a mineral soil

(2018) Fang Li et al.   LAND DEGRADATION & DEVELOPMENT

Exploring the Abundance and Diversity of Bacterial Communities and Quantifying Antibiotic-Related Genes Along an Elevational Gradient in Taibai Mountain, China

(2018) Chu Peng et al.   MICROBIAL ECOLOGY

Keystone taxa as drivers of microbiome structure and functioning

(2018) Samiran Banerjee et al.   NATURE REVIEWS MICROBIOLOGY

Community Assembly Processes of the Microbial Rare Biosphere

(2018) Xiu Jia et al.   TRENDS IN MICROBIOLOGY

Effects of organic substitution for synthetic N fertilizer on soil bacterial diversity and community composition: A 10-year field trial in a tea plantation

(2018) Lingfei Ji et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Soil bacterial networks are less stable under drought than fungal networks

(2018) Franciska T. de Vries et al.   Nature Communications

Adaptation of soil microbial growth to temperature: Using a tropical elevation gradient to predict future changes

(2018) Andrew T. Nottingham et al.   GLOBAL CHANGE BIOLOGY

Changes in litter quality induced by N deposition alter soil microbial communities

(2018) Yingbin Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

Responses of soil organic carbon decomposition and microbial community to the addition of plant residues with different C:N ratio

(2017) Xiao Liang et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Rare symbionts may contribute to the resilience of coral–algal assemblages

(2017) Maren Ziegler et al.   ISME Journal

Biogeography and ecological diversity patterns of rare and abundant bacteria in oil-contaminated soils

(2017) Shuo Jiao et al.   MOLECULAR ECOLOGY

Future threats to biodiversity and pathways to their prevention

(2017) David Tilman et al.   NATURE

Embracing the unknown: disentangling the complexities of the soil microbiome

(2017) Noah Fierer   NATURE REVIEWS MICROBIOLOGY

Soil networks become more connected and take up more carbon as nature restoration progresses

(2017) Elly Morriën et al.   Nature Communications

Exploring the Symbiodinium rare biosphere provides evidence for symbiont switching in reef-building corals

(2016) Nadine M Boulotte et al.   ISME Journal

Resource Availability Modulates the Cooperative and Competitive Nature of a Microbial Cross-Feeding Mutualism

(2016) Tim A. Hoek et al.   PLOS BIOLOGY

Indexing Soil Quality under Long-Term Maize-Wheat Cropping System in an Acidic Alfisol

(2015) Jintu Dutta et al.   COMMUNICATIONS IN SOIL SCIENCE AND PLANT ANALYSIS

Network succession reveals the importance of competition in response to emulsified vegetable oil amendment for uranium bioremediation

(2015) Ye Deng et al.   ENVIRONMENTAL MICROBIOLOGY

Resource limitation drives spatial organization in microbial groups

(2015) Sara Mitri et al.   ISME Journal

Changes in fungal communities along a boreal forest soil fertility gradient

(2015) Erica Sterkenburg et al.   NEW PHYTOLOGIST

The ecology of the microbiome: Networks, competition, and stability

(2015) K. Z. Coyte et al.   SCIENCE

Understanding and managing soil biodiversity: a major challenge in agroecology

(2014) Philippe Lemanceau et al.   Agronomy for Sustainable Development

Distinct soil microbial diversity under long-term organic and conventional farming

(2014) Martin Hartmann et al.   ISME Journal

Nitrification and acidification from urea application in red soil (Ferralic Cambisol) after different long-term fertilization treatments

(2014) Zejiang Cai et al.   JOURNAL OF SOILS AND SEDIMENTS

Soil fertility and its significance to crop productivity and sustainability in typical agroecosystem: a summary of long-term fertilizer experiments in China

(2014) Qingyin Shang et al.   PLANT AND SOIL

Long-term effects of mineral fertilizers on soil microorganisms – A review

(2014) Daniel Geisseler et al.   SOIL BIOLOGY & BIOCHEMISTRY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

FLASH assembly of TALENs for high-throughput genome editing

(2012) Deepak Reyon et al.   NATURE BIOTECHNOLOGY

Growth response of crops to soil microbial communities from conventional monocropping and tree-based intercropping systems

(2012) L. D. Bainard et al.   PLANT AND SOIL

Denitrifying Bacteria from the Genus Rhodanobacter Dominate Bacterial Communities in the Highly Contaminated Subsurface of a Nuclear Legacy Waste Site

(2011) Stefan J. Green et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Bacterial Community Structure Along Moisture Gradients in the Parafluvial Sediments of Two Ephemeral Desert Streams

(2010) Lydia H. Zeglin et al.   MICROBIAL ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Nitrogen transformations revealed by isotope dilution in an organically fertilized hybrid poplar plantation

(2010) Arlette Lteif et al.   PLANT AND SOIL

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

Plants can use protein as a nitrogen source without assistance from other organisms

(2008) C. Paungfoo-Lonhienne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA