Hunter-gatherer genomes reveal diverse demographic trajectories during the rise of farming in Eastern Africa

Evidence of the interplay of genetics and culture in Ethiopia

(2021) Saioa López et al.   Nature Communications

Ancient West African foragers in the context of African population history

(2020) Mark Lipson et al.   NATURE

A Fast and Simple Method for Detecting Identity-by-Descent Segments in Large-Scale Data

(2020) Ying Zhou et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Insights into human genetic variation and population history from 929 diverse genomes

(2020) Anders Bergström et al.   SCIENCE

Accounting for long-range correlations in genome-wide simulations of large cohorts

(2020) Dominic Nelson et al.   PLoS Genetics

Ancient genomes reveal complex patterns of population movement, interaction, and replacement in sub-Saharan Africa

(2020) Ke Wang et al.   Science Advances

Genomic evidence for shared common ancestry of East African hunting-gathering populations and insights into local adaptation

(2019) Laura B. Scheinfeldt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient genomes indicate population replacement in Early Neolithic Britain

(2019) Selina Brace et al.   Nature Ecology & Evolution

Ancient DNA reveals a multistep spread of the first herders into sub-Saharan Africa

(2019) Mary E. Prendergast et al.   SCIENCE

The demographic history and mutational load of African hunter-gatherers and farmers

(2018) Marie Lopez et al.   Nature Ecology & Evolution

The genomic history of southeastern Europe

(2018) Iain Mathieson et al.   NATURE

Ancient DNA from Chalcolithic Israel reveals the role of population mixture in cultural transformation

(2018) Éadaoin Harney et al.   Nature Communications

Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago

(2017) Carina M. Schlebusch et al.   SCIENCE

Northeast African genomic variation shaped by the continuity of indigenous groups and Eurasian migrations

(2017) Nina Hollfelder et al.   PLoS Genetics

pong: fast analysis and visualization of latent clusters in population genetic data

(2016) Aaron A. Behr et al.   BIOINFORMATICS

Fine-Scale Human Population Structure in Southern Africa Reflects Ecogeographic Boundaries

(2016) Caitlin Uren et al.   GENETICS

Genomic insights into the origin of farming in the ancient Near East

(2016) Iosif Lazaridis et al.   NATURE

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

(2016) Swapan Mallick et al.   NATURE

Early farmers from across Europe directly descended from Neolithic Aegeans

(2016) Zuzana Hofmanová et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Efficient Coalescent Simulation and Genealogical Analysis for Large Sample Sizes

(2016) Jerome Kelleher et al.   PLoS Computational Biology

Fine-Scale Human Population Structure in Southern Africa Reflects Ecogeographic Boundaries

(2016) Caitlin Uren et al.   GENETICS

Tracing the Route of Modern Humans out of Africa by Using 225 Human Genome Sequences from Ethiopians and Egyptians

(2015) Luca Pagani et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Accurate Non-parametric Estimation of Recent Effective Population Size from Segments of Identity by Descent

(2015) Sharon R. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

Visualizing spatial population structure with estimated effective migration surfaces

(2015) Desislava Petkova et al.   NATURE GENETICS

A comparison of worldwide phonemic and genetic variation in human populations

(2015) Nicole Creanza et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient Ethiopian genome reveals extensive Eurasian admixture in Eastern Africa

(2015) M. Gallego Llorente et al.   SCIENCE

Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference

(2015) Lucy van Dorp et al.   PLoS Genetics

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

Determinants of Mutation Rate Variation in the Human Germline

(2014) Laure Ségurel et al.   Annual Review of Genomics and Human Genetics

Ancient human genomes suggest three ancestral populations for present-day Europeans

(2014) Iosif Lazaridis et al.   NATURE

Adaptive, convergent origins of the pygmy phenotype in African rainforest hunter-gatherers

(2014) G. H. Perry et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient west Eurasian ancestry in southern and eastern Africa

(2014) J. K. Pickrell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Khoisan hunter-gatherers have been the largest population throughout most of modern-human demographic history

(2014) Hie Lim Kim et al.   Nature Communications

The impact of agricultural emergence on the genetic history of African rainforest hunter-gatherers and agriculturalists

(2014) Etienne Patin et al.   Nature Communications

Inferring Admixture Histories of Human Populations Using Linkage Disequilibrium

(2013) P.-R. Loh et al.   GENETICS

Improving the Accuracy and Efficiency of Identity-by-Descent Detection in Population Data

(2013) B. L. Browning et al.   GENETICS

Human Genetic Data Reveal Contrasting Demographic Patterns between Sedentary and Nomadic Populations That Predate the Emergence of Farming

(2013) Carla Aimé et al.   MOLECULAR BIOLOGY AND EVOLUTION

Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

(2013) Maanasa Raghavan et al.   NATURE

Ethiopian Genetic Diversity Reveals Linguistic Stratification and Complex Influences on the Ethiopian Gene Pool

(2012) Luca Pagani et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genomic Patterns of Homozygosity in Worldwide Human Populations

(2012) Trevor J. Pemberton et al.   AMERICAN JOURNAL OF HUMAN GENETICS

zCall: a rare variant caller for array-based genotyping

(2012) Jacqueline I. Goldstein et al.   BIOINFORMATICS

Ancient Admixture in Human History

(2012) N. Patterson et al.   GENETICS

Improved whole-chromosome phasing for disease and population genetic studies

(2012) Olivier Delaneau et al.   NATURE METHODS

Origins and Genetic Legacy of Neolithic Farmers and Hunter-Gatherers in Europe

(2012) P. Skoglund et al.   SCIENCE

The landscape of recombination in African Americans

(2011) Anjali G. Hinch et al.   NATURE

Hunter-gatherer genomic diversity suggests a southern African origin for modern humans

(2011) B. M. Henn et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rapid, global demographic expansions after the origins of agriculture

(2011) C. R. Gignoux et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient DNA Reveals Lack of Continuity between Neolithic Hunter-Gatherers and Contemporary Scandinavians

(2009) Helena Malmström et al.   CURRENT BIOLOGY

Origins and Genetic Diversity of Pygmy Hunter-Gatherers from Western Central Africa

(2009) Paul Verdu et al.   CURRENT BIOLOGY

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Reconstructing Indian population history

(2009) David Reich et al.   NATURE

Genetic Discontinuity Between Local Hunter-Gatherers and Central Europe's First Farmers

(2009) B. Bramanti et al.   SCIENCE