Ancient genomes reveal complex patterns of population movement, interaction, and replacement in sub-Saharan Africa

Assessing the importance of cultural diffusion in the Bantu spread into southeastern Africa

(2019) Neus Isern et al.   PLoS One

Ancient DNA reveals a multistep spread of the first herders into sub-Saharan Africa

(2019) Mary E. Prendergast et al.   SCIENCE

Ancient DNA sheds light on the genetic origins of early Iron Age Philistines

(2019) Michal Feldman et al.   Science Advances

Estimating genetic kin relationships in prehistoric populations

(2018) Jose Manuel Monroy Kuhn et al.   PLoS One

Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe

(2018) Rosa Fregel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pleistocene North African genomes link Near Eastern and sub-Saharan African human populations

(2018) Marieke van de Loosdrecht et al.   SCIENCE

Genetic structure and sex-biased gene flow in the history of southern African populations

(2018) Vladimir Bajić et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Ancient herders enriched and restructured African grasslands

(2018) Fiona Marshall et al.   NATURE

A monumental cemetery built by eastern Africa’s first herders near Lake Turkana, Kenya

(2018) Elisabeth A. Hildebrand et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient DNA from Chalcolithic Israel reveals the role of population mixture in cultural transformation

(2018) Éadaoin Harney et al.   Nature Communications

Malaria Host Candidate Genes Validated by Association With Current, Recent, and Historical Measures of Transmission Intensity

(2017) Nuno Sepúlveda et al.   JOURNAL OF INFECTIOUS DISEASES

Subsistence mosaics, forager-farmer interactions, and the transition to food production in eastern Africa

(2017) Alison Crowther et al.   QUATERNARY INTERNATIONAL

Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago

(2017) Carina M. Schlebusch et al.   SCIENCE

Genomic insights into the origin of farming in the ancient Near East

(2016) Iosif Lazaridis et al.   NATURE

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

(2016) Swapan Mallick et al.   NATURE

HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing

(2016) Hansi Weissensteiner et al.   NUCLEIC ACIDS RESEARCH

An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data

(2015) Goo Jun et al.   GENOME RESEARCH

Massive migration from the steppe was a source for Indo-European languages in Europe

(2015) Wolfgang Haak et al.   NATURE

An early modern human from Romania with a recent Neanderthal ancestor

(2015) Qiaomei Fu et al.   NATURE

Late Pleistocene age and archaeological context for the hominin calvaria from GvJm-22 (Lukenya Hill, Kenya)

(2015) Christian A. Tryon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient Ethiopian genome reveals extensive Eurasian admixture in Eastern Africa

(2015) M. Gallego Llorente et al.   SCIENCE

Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone

(2015) Ron Pinhasi et al.   PLoS One

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Lactase Persistence Alleles Reveal Partial East African Ancestry of Southern African Khoe Pastoralists

(2014) Gwenna Breton et al.   CURRENT BIOLOGY

Tracing Pastoralist Migrations to Southern Africa with Lactase Persistence Alleles

(2014) Enrico Macholdt et al.   CURRENT BIOLOGY

Ancient human genomes suggest three ancestral populations for present-day Europeans

(2014) Iosif Lazaridis et al.   NATURE

Partial uracil-DNA-glycosylase treatment for screening of ancient DNA

(2014) N. Rohland et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ancient west Eurasian ancestry in southern and eastern Africa

(2014) J. K. Pickrell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Revised Timescale for Human Evolution Based on Ancient Mitochondrial Genomes

(2013) Qiaomei Fu et al.   CURRENT BIOLOGY

HAPLOFIND: A New Method for High-Throughput mtDNA Haplogroup Assignment

(2013) Dario Vianello et al.   HUMAN MUTATION

Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments

(2013) J. Dabney et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IntCal13 and Marine13 Radiocarbon Age Calibration Curves 0–50,000 Years cal BP

(2013) Paula J Reimer et al.   RADIOCARBON

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Ancient Admixture in Human History

(2012) N. Patterson et al.   GENETICS

The genetic prehistory of southern Africa

(2012) Joseph K. Pickrell et al.   Nature Communications

Genomic Ancestry of North Africans Supports Back-to-Africa Migrations

(2012) Brenna M. Henn et al.   PLoS Genetics

RADIOCARBON DATES FROM THE OXFORD AMS SYSTEM:ARCHAEOMETRYDATELIST 33

(2009) C. BRONK RAMSEY et al.   ARCHAEOMETRY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

SNaPshot minisequencing to resolve mitochondrial macro-haplogroups found in Africa

(2009) Carina M. Schlebusch et al.   ELECTROPHORESIS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

The Genetic Structure and History of Africans and African Americans

(2009) S. A. Tishkoff et al.   SCIENCE

A new method for estimating age-at-death from the first rib

(2008) Elizabeth A. DiGangi et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Y-chromosomal evidence of a pastoralist migration through Tanzania to southern Africa

(2008) B. M. Henn et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA