A secondary metabolite drives intraspecies antagonism in a gut symbiont that is inhibited by cell-wall acetylation

Polyene-Producing Streptomyces spp. From the Fungus-Growing Termite Macrotermes barneyi Exhibit High Inhibitory Activity Against the Antagonistic Fungus Xylaria

(2021) Jingjing Li et al.   Frontiers in Microbiology

Molecular Evolutionary Genetics Analysis (MEGA) for macOS

(2020) Glen Stecher et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Human Lung-Associated Streptomyces sp. TR1341 Produces Various Secondary Metabolites Responsible for Virulence, Cytotoxicity and Modulation of Immune Response

(2020) Andrej Herbrík et al.   Frontiers in Microbiology

A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae

(2020) Jinshui Zheng et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Epipyrone A, a Broad-Spectrum Antifungal Compound Produced by Epicoccum nigrum ICMP 19927

(2020) Alex J. Lee et al.   MOLECULES

Exploiting Prophage-mediated Lysis for Biotherapeutic Release by Lactobacillus reuteri

(2019) Laura M. Alexander et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A new fusicoccane diterpene and a new polyene from the plant endophytic fungus Talaromyces pinophilus and their antimicrobial activities

(2019) Wen-Ting Zhao et al.   NATURAL PRODUCT RESEARCH

Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease

(2019) Gajender Aleti et al.   mBio

Prophages in Lactobacillus reuteri Are Associated with Fitness Trade-Offs but Can Increase Competitiveness in the Gut Ecosystem

(2019) Jee-Hwan Oh et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The evolution of ecological facilitation within mixed-species biofilms in the mouse gastrointestinal tract

(2018) Xiaoxi B. Lin et al.   ISME Journal

D-Alanyl-D-Alanine Ligase as a Broad-Host-Range Counterselection Marker in Vancomycin-Resistant Lactic Acid Bacteria

(2018) Shenwei Zhang et al.   JOURNAL OF BACTERIOLOGY

A Gut Commensal-Produced Metabolite Mediates Colonization Resistance to Salmonella Infection

(2018) Amanda Jacobson et al.   Cell Host & Microbe

Evolutionarily stable communities: a framework for understanding the role of trait evolution in the maintenance of diversity

(2018) Kyle F. Edwards et al.   ECOLOGY LETTERS

Experimental evaluation of the importance of colonization history in early-life gut microbiota assembly

(2018) Inés Martínez et al.   eLife

Production of Food and Feed Additives From Non-food-competing Feedstocks: Valorizing N-acetylmuramic Acid for Amino Acid and Carotenoid Fermentation With Corynebacterium glutamicum

(2018) Elvira Sgobba et al.   Frontiers in Microbiology

The gut symbionts Lactobacillus reuteri R2lc and 2010 encode a polyketide synthase cluster that activates the mammalian aryl-hydrocarbon receptor

(2018) Mustafa Özçam et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

From bacterial killing to immune modulation: Recent insights into the functions of lysozyme

(2017) Stephanie A. Ragland et al.   PLoS Pathogens

Accumulation of PeptidoglycanO-Acetylation Leads to Altered Cell Wall Biochemistry and Negatively Impacts Pathogenesis Factors ofCampylobacter jejuni

(2016) Reuben Ha et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Microcins mediate competition among Enterobacteriaceae in the inflamed gut

(2016) Martina Sassone-Corsi et al.   NATURE

The effect of host genetics on the gut microbiome

(2016) Marc Jan Bonder et al.   NATURE GENETICS

Revised Estimates for the Number of Human and Bacteria Cells in the Body

(2016) Ron Sender et al.   PLOS BIOLOGY

Influence of early life exposure, host genetics and diet on the mouse gut microbiome and metabolome

(2016) Antoine M. Snijders et al.   Nature Microbiology

Genetic Determinants of Reutericyclin Biosynthesis in Lactobacillus reuteri

(2015) Xiaoxi B. Lin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Analyses of Intestinal Microbiota: Culture versus Sequencing: Figure 1

(2015) Andreas Hiergeist et al.   ILAR JOURNAL

Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters

(2014) Peter Cimermancic et al.   CELL

A Systematic Analysis of Biosynthetic Gene Clusters in the Human Microbiome Reveals a Common Family of Antibiotics

(2014) Mohamed S. Donia et al.   CELL

Diet and Feeding Pattern Affect the Diurnal Dynamics of the Gut Microbiome

(2014) Amir Zarrinpar et al.   Cell Metabolism

CRISPR–Cas9-assisted recombineering in Lactobacillus reuteri

(2014) Jee-Hwan Oh et al.   NUCLEIC ACIDS RESEARCH

Rapid and Reliable DNA Assembly via Ligase Cycling Reaction

(2014) Stefan de Kok et al.   ACS Synthetic Biology

A Systematic Computational Analysis of Biosynthetic Gene Cluster Evolution: Lessons for Engineering Biosynthesis

(2014) Marnix H. Medema et al.   PLoS Computational Biology

Tryptophan Catabolites from Microbiota Engage Aryl Hydrocarbon Receptor and Balance Mucosal Reactivity via Interleukin-22

(2013) Teresa Zelante et al.   IMMUNITY

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Molecular Characterization of Host-Specific Biofilm Formation in a Vertebrate Gut Symbiont

(2013) Steven A. Frese et al.   PLoS Genetics

Microbial Strain Prioritization Using Metabolomics Tools for the Discovery of Natural Products

(2012) Yanpeng Hou et al.   ANALYTICAL CHEMISTRY

High efficiency recombineering in lactic acid bacteria

(2012) Jan-Peter van Pijkeren et al.   NUCLEIC ACIDS RESEARCH

Ecological and evolutionary dynamics of coexisting lineages during a long-term experiment with Escherichia coli

(2012) M. Le Gac et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interactions Between the Microbiota and the Immune System

(2012) L. V. Hooper et al.   SCIENCE

Exploring optimization parameters to increase ssDNA recombineering inLactococcus lactisandLactobacillus reuteri

(2012) Jan-Peter van Pijkeren et al.   Bioengineered

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

(2011) Marnix H. Medema et al.   NUCLEIC ACIDS RESEARCH

The Antibacterial Lectin RegIII  Promotes the Spatial Segregation of Microbiota and Host in the Intestine

(2011) S. Vaishnava et al.   SCIENCE

The Evolution of Host Specialization in the Vertebrate Gut Symbiont Lactobacillus reuteri

(2011) Steven A. Frese et al.   PLoS Genetics

Identification of a bacterial inhibitor against g-type lysozyme

(2010) L. Vanderkelen et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

O-Acetylation of Peptidoglycan in Gram-negative Bacteria

(2010) Patrick J. Moynihan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Host-microbial symbiosis in the vertebrate gastrointestinal tract and the Lactobacillus reuteri paradigm

(2010) J. Walter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution

(2009) Phaik Lyn Oh et al.   ISME Journal

Bacterial competition: surviving and thriving in the microbial jungle

(2009) Michael E. Hibbing et al.   NATURE REVIEWS MICROBIOLOGY

The Effect of Diet on the Human Gut Microbiome: A Metagenomic Analysis in Humanized Gnotobiotic Mice

(2009) P. J. Turnbaugh et al.   Science Translational Medicine

The aryl hydrocarbon receptor links TH17-cell-mediated autoimmunity to environmental toxins

(2008) Marc Veldhoen et al.   NATURE

Interleukin-22 mediates early host defense against attaching and effacing bacterial pathogens

(2008) Yan Zheng et al.   NATURE MEDICINE