Health and environmental safety of nanomaterials: O Data, Where Art Thou?

Manually curated transcriptomics data collection for toxicogenomic assessment of engineered nanomaterials

(2021) Laura Aliisa Saarimäki et al.   Scientific Data

A deep learning approach using synthetic images for segmenting and estimating 3D orientation of nanoparticles in EM images

(2021) Antón Cid-Mejías et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

Prediction of Plant Uptake and Translocation of Engineered Metallic Nanoparticles by Machine Learning

(2021) Xiaoxuan Wang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Deep Learning Based Instance Segmentation of Titanium Dioxide Particles in the Form of Agglomerates in Scanning Electron Microscopy

(2021) Paul Monchot et al.   Nanomaterials

NanoTox: Development of a Parsimonious In Silico Model for Toxicity Assessment of Metal-Oxide Nanoparticles Using Physicochemical Features

(2021) Nilesh Anantha Subramanian et al.   ACS Omega

Computational enrichment of physicochemical data for the development of a ζ-potential read-across predictive model with Isalos Analytics Platform

(2021) Anastasios G. Papadiamantis et al.   NanoImpact

Using quasi-SMILES for the predictive modeling of the safety of 574 metal oxide nanoparticles measured in different experimental conditions

(2021) Alla P. Toropova et al.   ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY

Hierarchically Structured Classification of Carbon Nanostructures from TEM Images by Machine Learning and Computer Vision

(2021) Chen Wang et al.   MICROSCOPY AND MICROANALYSIS

Towards FAIR nanosafety data

(2021) Nina Jeliazkova et al.   Nature Nanotechnology

Deep Learning Method to Accelerate Discovery of Hybrid Polymer-Graphene Composites

(2021) Farzaneh Shayeganfar et al.   Scientific Reports

Nanomaterial Databases: Data Sources for Promoting Design and Risk Assessment of Nanomaterials

(2021) Zuowei Ji et al.   Nanomaterials

Data Shepherding in Nanotechnology. The Initiation

(2021) Irini Furxhi et al.   Nanomaterials

Data Shepherding in Nanotechnology. The Exposure Field Campaign Template

(2021) Irini Furxhi et al.   Nanomaterials

A Machine Learning Tool to Predict the Antibacterial Capacity of Nanoparticles

(2021) Mahsa Mirzaei et al.   Nanomaterials

Global Trends in Cancer Nanotechnology: A Qualitative Scientific Mapping Using Content-Based and Bibliometric Features for Machine Learning Text Classification

(2021) Nuwan Indika Millagaha Gedara et al.   Cancers

The NanoInformatics Knowledge Commons: Capturing spatial and temporal nanomaterial transformations in diverse systems

(2021) Jaleesia D. Amos et al.   NanoImpact

FAIRification of nanosafety data to improve applicability of (Q)SAR approaches: a case study on in vitro Comet assay genotoxicity data

(2021) Cecilia Bossa et al.   Computational Toxicology

Ecotoxicological read-across models for predicting acute toxicity of freshly dispersed versus medium-aged NMs to Daphnia magna

(2021) Dimitra-Danai Varsou et al.   CHEMOSPHERE

Nano-QTTR development for interspecies aquatic toxicity of silver nanoparticles between daphnia and fish

(2021) Ukhyun Jung et al.   CHEMOSPHERE

Meta-analysis of cellular toxicity for graphene via data-mining the literature and machine learning

(2021) Ying Ma et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Data Shepherding in Nanotechnology: An Antimicrobial Functionality Data Capture Template

(2021) Irini Furxhi et al.   Coatings

Nanotoxicology data for in silico tools: a literature review

(2020) Irini Furxhi et al.   Nanotoxicology

Practices and Trends of Machine Learning Application in Nanotoxicology

(2020) Irini Furxhi et al.   Nanomaterials

NanoSolveIT Project: Driving Nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment

(2020) Antreas Afantitis et al.   Computational and Structural Biotechnology Journal

Learning from the Machine: Uncovering Sustainable Nanoparticle Design Rules

(2020) Clyde A. Daly et al.   Journal of Physical Chemistry C

Machine learning predicts the functional composition of the protein corona and the cellular recognition of nanoparticles

(2020) Zhan Ban et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Construction of a web-based nanomaterial database by big data curation and modeling friendly nanostructure annotations

(2020) Xiliang Yan et al.   Nature Communications

Quantitative Structure–Activity Relationship Models for Predicting Inflammatory Potential of Metal Oxide Nanoparticles

(2020) Yang Huang et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

Predicting In Vitro Neurotoxicity Induced by Nanoparticles Using Machine Learning

(2020) Irini Furxhi et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Understanding and optimization of thin film nanocomposite membranes for reverse osmosis with machine learning

(2020) Chester Su Hern Yeo et al.   JOURNAL OF MEMBRANE SCIENCE

The Causal Inference Machine Learning Leads to Original Experimental Discovery in CdSe/CdS Core/Shell Nanoparticles

(2020) Rulin Liu et al.   Journal of Physical Chemistry Letters

Development of Deep Learning Models for Predicting the Effects of Exposure to Engineered Nanomaterials on Daphnia magna

(2020) Pantelis Karatzas et al.   Small

Prediction of Antimalarial Drug-Decorated Nanoparticle Delivery Systems with Random Forest Models

(2020) Diana V. Urista et al.   Biology-Basel

Predicting Cytotoxicity of Metal Oxide Nanoparticles Using Isalos Analytics Platform

(2020) Anastasios G. Papadiamantis et al.   Nanomaterials

Metadata Stewardship in Nanosafety Research: Community-Driven Organisation of Metadata Schemas to Support FAIR Nanoscience Data

(2020) Anastasios G. Papadiamantis et al.   Nanomaterials

QNAR modeling of cytotoxicity of mixing nano-TiO2 and heavy metals

(2020) Beilei Yuan et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

A methodology for developing key events to advance nanomaterial-relevant adverse outcome pathways to inform risk assessment

(2020) Sabina Halappanavar et al.   Nanotoxicology

NCI Alliance for Nanotechnology in Cancer – from academic research to clinical interventions

(2019) Piotr Grodzinski et al.   BIOMEDICAL MICRODEVICES

Application of Bayesian networks in determining nanoparticle-induced cellular outcomes using transcriptomics

(2019) Irini Furxhi et al.   Nanotoxicology

A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells

(2019) Elisabeth Joossens et al.   Scientific Data

Synthesis and characterization of silver nanoparticle-decorated cobalt nanocomposites (Co@AgNPs) and their density-dependent antibacterial activity

(2019) Zakia Kanwal et al.   Royal Society Open Science

Supervised Learning and Mass Spectrometry Predicts the in Vivo Fate of Nanomaterials

(2019) James Lazarovits et al.   ACS Nano

Bayesian Network Resource for Meta-Analysis: Cellular Toxicity of Quantum Dots

(2019) Muhammad Bilal et al.   Small

Preparation of pod-shaped TiO 2 and Ag@TiO 2 nano burst tubes and their photocatalytic activity

(2019) Shang Wang et al.   Royal Society Open Science

Machine learning algorithm validation with a limited sample size

(2019) Andrius Vabalas et al.   PLoS One

A unified in silico model based on perturbation theory for assessing the genotoxicity of metal oxide nanoparticles

(2019) Amit Kumar Halder et al.   CHEMOSPHERE

Quasi-SMILES-Based Nano-Quantitative Structure–Activity Relationship Model to Predict the Cytotoxicity of Multiwalled Carbon Nanotubes to Human Lung Cells

(2018) Tung Xuan Trinh et al.   CHEMICAL RESEARCH IN TOXICOLOGY

The FAIR guiding principles for data stewardship: fair enough?

(2018) Martin Boeckhout et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Modelling the toxicity of a large set of metal and metal oxide nanoparticles using the OCHEM platform

(2018) Vasyl Kovalishyn et al.   FOOD AND CHEMICAL TOXICOLOGY

A nanomaterial release model for waste shredding using a Bayesian belief network

(2018) Neeraj Shandilya et al.   JOURNAL OF NANOPARTICLE RESEARCH

Towards a generalized toxicity prediction model for oxide nanomaterials using integrated data from different sources

(2018) Jang-Sik Choi et al.   Scientific Reports

Screening Priority Factors Determining and Predicting the Reproductive Toxicity of Various Nanoparticles

(2018) Zhan Ban et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Toxicity Classification of Oxide Nanomaterials: Effects of Data Gap Filling and PChem Score-based Screening Approaches

(2018) My Kieu Ha et al.   Scientific Reports

Improved mould resistance and antibacterial activity of bamboo coated with ZnO/graphene

(2018) Jin Wang et al.   Royal Society Open Science

Learning to predict single-wall carbon nanotube-recognition DNA sequences

(2018) Yoona Yang et al.   npj Computational Materials

Using artificial neural network to investigate physiological changes and cerium oxide nanoparticles and cadmium uptake by Brassica napus plants

(2018) Lorenzo Rossi et al.   ENVIRONMENTAL POLLUTION

Quasi-QSAR for predicting the cell viability of human lung and skin cells exposed to different metal oxide nanomaterials

(2018) Jang-Sik Choi et al.   CHEMOSPHERE

Machine-Learning Approach for Design of Nanomagnetic-Based Antennas

(2017) Carmine Gianfagna et al.   JOURNAL OF ELECTRONIC MATERIALS

Probing the toxicity of nanoparticles: a unified in silico machine learning model based on perturbation theory

(2017) Riccardo Concu et al.   Nanotoxicology

Application of Bayesian networks for hazard ranking of nanomaterials to support human health risk assessment

(2017) Hans J. P. Marvin et al.   Nanotoxicology

Reproducibility, sharing and progress in nanomaterial databases

(2017) Alexander Tropsha et al.   Nature Nanotechnology

Comparative hazard analysis and toxicological modeling of diverse nanomaterials using the embryonic zebrafish (EZ) metric of toxicity

(2015) Bryan Harper et al.   JOURNAL OF NANOPARTICLE RESEARCH

Current situation on the availability of nanostructure–biological activity data

(2015) C. Oksel et al.   SAR AND QSAR IN ENVIRONMENTAL RESEARCH

Predicting cytotoxicity of PAMAM dendrimers using molecular descriptors

(2015) David E Jones et al.   Beilstein Journal of Nanotechnology

An ISA-TAB-Nano based data collection framework to support data-driven modelling of nanotoxicology

(2015) Richard L Marchese Robinson et al.   Beilstein Journal of Nanotechnology

Metal Oxide Nanomaterial QNAR Models: Available Structural Descriptors and Understanding of Toxicity Mechanisms

(2015) Jiali Ying et al.   Nanomaterials

Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles

(2014) Carl D. Walkey et al.   ACS Nano

Computational ecotoxicology: Simultaneous prediction of ecotoxic effects of nanoparticles under different experimental conditions

(2014) Valeria V. Kleandrova et al.   ENVIRONMENT INTERNATIONAL

Computational Tool for Risk Assessment of Nanomaterials: Novel QSTR-Perturbation Model for Simultaneous Prediction of Ecotoxicity and Cytotoxicity of Uncoated and Coated Nanoparticles under Multiple Experimental Conditions

(2014) Valeria V. Kleandrova et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Computer-aided nanotoxicology: assessing cytotoxicity of nanoparticles under diverse experimental conditions by using a novel QSTR-perturbation approach

(2014) Feng Luan et al.   Nanoscale

Nano(Q)SAR: Challenges, pitfalls and perspectives

(2014) Ratna Tantra et al.   Nanotoxicology

ISA-TAB-Nano: A Specification for Sharing Nanomaterial Research Data in Spreadsheet-based Format

(2013) Dennis G Thomas et al.   BMC BIOTECHNOLOGY

A Meta-Analysis of Carbon Nanotube Pulmonary Toxicity Studies-How Physical Dimensions and Impurities Affect the Toxicity of Carbon Nanotubes

(2013) Jeremy M. Gernand et al.   RISK ANALYSIS

Use of Metal Oxide Nanoparticle Band Gap To Develop a Predictive Paradigm for Oxidative Stress and Acute Pulmonary Inflammation

(2012) Haiyuan Zhang et al.   ACS Nano

Nanoinformatics: a new area of research in nanomedicine

(2012) Victor Maojo et al.   International Journal of Nanomedicine

Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of chemical information

(2011) Iurii Sushko et al.   JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN

Toxicity of nanosized and bulk ZnO, CuO and TiO2 to bacteria Vibrio fischeri and crustaceans Daphnia magna and Thamnocephalus platyurus

(2008) Margit Heinlaan et al.   CHEMOSPHERE

A Molecular‐Based Model for Prediction of Solubility of C60Fullerene in Various Solvents

(2008) Farhad Gharagheizi et al.   FULLERENES NANOTUBES AND CARBON NANOSTRUCTURES

Proactively designing nanomaterials to enhance performance and minimise hazard

(2008) Stacey L. Harper et al.   International Journal of Nanotechnology