Genome-Wide Identification and Characterization of Melon bHLH Transcription Factors in Regulation of Fruit Development

Natural variation in temperature-modulated immunity uncovers transcription factor bHLH059 as a thermoresponsive regulator in Arabidopsis thaliana

(2021) Friederike Bruessow et al.   PLoS Genetics

The Transcriptional Control of Iron Homeostasis in Plants: A Tale of bHLH Transcription Factors?

(2019) Fei Gao et al.   Frontiers in Plant Science

Fruit ripening: the role of hormones, cell wall modifications and their intersection with pathogens

(2019) Sara Forlani et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome of ‘Charleston Gray’, the principal American watermelon cultivar, and genetic characterization of 1,365 accessions in the U.S. National Plant Germplasm System watermelon collection

(2019) Shan Wu et al.   PLANT BIOTECHNOLOGY JOURNAL

The Transcription Factor INDUCER OF CBF EXPRESSION1 Interacts with ABSCISIC ACID INSENSITIVE5 and DELLA Proteins to Fine-tune Abscisic Acid Signaling during Seed Germination in Arabidopsis

(2019) Yanru Hu et al.   PLANT CELL

Overexpression of a basic helix–loop–helix transcription factor gene, SlbHLH22, promotes early flowering and accelerates fruit ripening in tomato (Solanum lycopersicum L.)

(2019) Muhammad Waseem et al.   PLANTA

In silico and Expression Profile Analyses of the ERF Subfamily in Melon

(2019) Ch. Guo et al.   RUSSIAN JOURNAL OF GENETICS

Metascape provides a biologist-oriented resource for the analysis of systems-level datasets

(2019) Yingyao Zhou et al.   Nature Communications

Characteristics and Expression Pattern of MYC Genes in Triticum aestivum, Oryza sativa, and Brachypodium distachyon

(2019) Shoukun Chen et al.   Plants-Basel

Plant salt-tolerance mechanism: A review

(2018) Wenji Liang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Identification of basic/helix-loop-helix transcription factors reveals candidate genes involved in anthocyanin biosynthesis from the strawberry white-flesh mutant

(2018) Fengli Zhao et al.   Scientific Reports

bHLH13 Regulates Jasmonate-Mediated Defense Responses and Growth

(2018) Huang Huang et al.   Evolutionary Bioinformatics

Regulating the Regulators: The Control of Transcription Factors in Plant Defense Signaling

(2018) Danny Ng et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The basic helix-loop-helix transcription factor, bHLH11 functions in the iron-uptake system in Arabidopsis thaliana

(2018) Noriaki Tanabe et al.   JOURNAL OF PLANT RESEARCH

Mdb HLH 93, an apple activator regulating leaf senescence, is regulated by ABA and Md BT 2 in antagonistic ways

(2018) Jian‐Ping An et al.   NEW PHYTOLOGIST

Cucurbit Genomics Database (CuGenDB): a central portal for comparative and functional genomics of cucurbit crops

(2018) Yi Zheng et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database in 2019

(2018) Sara El-Gebali et al.   NUCLEIC ACIDS RESEARCH

Karyotype Stability and Unbiased Fractionation in the Paleo-Allotetraploid Cucurbita Genomes

(2017) Honghe Sun et al.   Molecular Plant

AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana

(2017) Rozenn Le Hir et al.   PHYSIOLOGIA PLANTARUM

The Jasmonate-Activated Transcription Factor MdMYC2 Regulates ETHYLENE RESPONSE FACTOR and Ethylene Biosynthetic Genes to Promote Ethylene Biosynthesis during Apple Fruit Ripening

(2017) Tong Li et al.   PLANT CELL

The bottle gourd genome provides insights into Cucurbitaceae evolution and facilitates mapping of a Papaya ring-spot virus resistance locus

(2017) Shan Wu et al.   PLANT JOURNAL

Genome-wide analysis of basic/helix-loop-helix gene family in peanut and assessment of its roles in pod development

(2017) Chao Gao et al.   PLoS One

A Radish Basic Helix-Loop-Helix Transcription Factor, RsTT8 Acts a Positive Regulator for Anthocyanin Biosynthesis

(2017) Sun-Hyung Lim et al.   Frontiers in Plant Science

The Soybean Basic Helix-Loop-Helix Transcription Factor ORG3-Like Enhances Cadmium Tolerance via Increased Iron and Reduced Cadmium Uptake and Transport from Roots to Shoots

(2017) Zhaolong Xu et al.   Frontiers in Plant Science

Genome Wide Identification and Characterization of Apple bHLH Transcription Factors and Expression Analysis in Response to Drought and Salt Stress

(2017) Ke Mao et al.   Frontiers in Plant Science

Jasmonate-responsive transcription factors regulating plant secondary metabolism

(2016) Meiliang Zhou et al.   BIOTECHNOLOGY ADVANCES

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

(2016) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

(2016) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

Comparative transcriptional profiling analysis of developing melon (Cucumis melo L.) fruit from climacteric and non-climacteric varieties

(2015) Montserrat Saladié et al.   BMC GENOMICS

Genome-wide identification and characterization of the bHLH gene family in tomato

(2015) Hua Sun et al.   BMC GENOMICS

Genome-wide characterization and expression analysis of common bean bHLH transcription factors in response to excess salt concentration

(2015) Musa Kavas et al.   MOLECULAR GENETICS AND GENOMICS

A basic helix-loop-helix transcription factor, PhFBH4, regulates flower senescence by modulating ethylene biosynthesis pathway in petunia

(2015) Jing Yin et al.   Horticulture Research

Overexpression of EcbHLH57 Transcription Factor from Eleusine coracana L. in Tobacco Confers Tolerance to Salt, Oxidative and Drought Stress

(2015) K. C. Babitha et al.   PLoS One

miR396a-Mediated Basic Helix–Loop–Helix Transcription Factor bHLH74 Repression Acts as a Regulator for Root Growth in Arabidopsis Seedlings

(2014) Maolin Bao et al.   PLANT AND CELL PHYSIOLOGY

Banana fruit NAC transcription factor MaNAC1 is a direct target of MaICE1 and involved in cold stress through interacting with MaCBF1

(2014) WEI SHAN et al.   PLANT CELL AND ENVIRONMENT

Helix-loop-helix/basic helix-loop-helix transcription factor network represses cell elongation in Arabidopsis through an apparent incoherent feed-forward loop

(2014) M. K. Zhiponova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide analysis of the bHLH transcription factor family in Chinese cabbage (Brassica rapa ssp. pekinensis)

(2013) Xiao-Ming Song et al.   MOLECULAR GENETICS AND GENOMICS

Arabidopsis Basic Helix-Loop-Helix Transcription Factors MYC2, MYC3, and MYC4 Regulate Glucosinolate Biosynthesis, Insect Performance, and Feeding Behavior

(2013) F. Schweizer et al.   PLANT CELL

Transcriptomic Events Involved in Melon Mature-Fruit Abscission Comprise the Sequential Induction of Cell-Wall Degrading Genes Coupled to a Stimulation of Endo and Exocytosis

(2013) Jorge Corbacho et al.   PLoS One

Transcription factors on the move

(2012) Shuang Wu et al.   CURRENT OPINION IN PLANT BIOLOGY

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

(2012) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

Regulatory switch enforced by basic helix-loop-helix and ACT-domain mediated dimerizations of the maize transcription factor R

(2012) Que Kong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genome of melon (Cucumis melo L.)

(2012) J. Garcia-Mas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TheArabidopsisbHLH Transcription Factors MYC3 and MYC4 Are Targets of JAZ Repressors and Act Additively with MYC2 in the Activation of Jasmonate Responses

(2011) Patricia Fernández-Calvo et al.   PLANT CELL

Hidden Markov model speed heuristic and iterative HMM search procedure

(2010) L Steven Johnson et al.   BMC BIOINFORMATICS

Evolutionary and comparative analysis of MYB and bHLH plant transcription factors

(2010) Antje Feller et al.   PLANT JOURNAL

Genome-Wide Classification and Evolutionary Analysis of the bHLH Family of Transcription Factors in Arabidopsis, Poplar, Rice, Moss, and Algae

(2010) L. Carretero-Paulet et al.   PLANT PHYSIOLOGY

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Origin and Diversification of Basic-Helix-Loop-Helix Proteins in Plants

(2009) N. Pires et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genome of the cucumber, Cucumis sativus L.

(2009) Sanwen Huang et al.   NATURE GENETICS