Machine Learning Applied to Omics Datasets Predicts Mortality in Patients with Alcoholic Hepatitis

Functional Microbial Responses to Alcohol Abstinence in Patients With Alcohol Use Disorder

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A Universal Gut-Microbiome-Derived Signature Predicts Cirrhosis

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Intestinal virome in patients with alcoholic hepatitis

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A gut microbiome signature for cirrhosis due to nonalcoholic fatty liver disease

(2019) Cyrielle Caussy et al.   Nature Communications

Biomarkers of macrophage activation and immune danger signals predict clinical outcomes in alcoholic hepatitis

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Serum and Fecal Oxylipins in Patients with Alcohol-Related Liver Disease

(2019) Bei Gao et al.   DIGESTIVE DISEASES AND SCIENCES

Intestinal fungal dysbiosis and systemic immune response to fungi in patients with alcoholic hepatitis

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Multi-Omics Analyses Detail Metabolic Reprogramming in Lipids, Carnitines, and Use of Glycolytic Intermediates between Prostate Small Cell Neuroendocrine Carcinoma and Prostate Adenocarcinoma

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The Candida albicans exotoxin candidalysin promotes alcohol-associated liver disease

(2019) Huikuan Chu et al.   JOURNAL OF HEPATOLOGY

Bacteriophage targeting of gut bacterium attenuates alcoholic liver disease

(2019) Yi Duan et al.   NATURE

The MetaCyc database of metabolic pathways and enzymes - a 2019 update

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Application of prognostic scores in the STOPAH trial: Discriminant function is no longer the optimal scoring system in alcoholic hepatitis

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Clinical prediction of HBV and HCV related hepatic fibrosis using machine learning

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Species-level functional profiling of metagenomes and metatranscriptomes

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Prediction of fatty liver disease using machine learning algorithms

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ranger: A Fast Implementation of Random Forests for High Dimensional Data in C++ and R

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Metabolism dysregulation induces a specific lipid signature of nonalcoholic steatohepatitis in patients

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Untargeted Metabolomics Strategies—Challenges and Emerging Directions

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Intestinal microbiota contributes to individual susceptibility to alcoholic liver disease

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Methods to determine intestinal permeability and bacterial translocation during liver disease

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MetaPhlAn2 for enhanced metagenomic taxonomic profiling

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MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis

(2015) Hiroshi Tsugawa et al.   NATURE METHODS

EASL Clinical Practical Guidelines: Management of Alcoholic Liver Disease

(2015)   JOURNAL OF HEPATOLOGY

The volatile compound BinBase mass spectral database

(2011) Kirsten Skogerson et al.   BMC BIOINFORMATICS

Multiple imputation by chained equations: what is it and how does it work?

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PathSeq: software to identify or discover microbes by deep sequencing of human tissue

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Zonulin and Its Regulation of Intestinal Barrier Function: The Biological Door to Inflammation, Autoimmunity, and Cancer

(2011) Alessio Fasano   PHYSIOLOGICAL REVIEWS

Incidence and mortality of alcoholic hepatitis in Denmark 1999–2008: A nationwide population based cohort study

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A New Scoring System for Prognostic Stratification of Patients With Alcoholic Hepatitis

(2008) Marlene Dominguez et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Nucleotide Biosynthesis Is Critical for Growth of Bacteria in Human Blood

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