Identification of Prognostic Biomarkers for Bladder Cancer Based on DNA Methylation Profile

Effects of DNA Methylation on TFs in Human Embryonic Stem Cells

(2021) Ximei Luo et al.   Frontiers in Genetics

RB1 and TP53 co-mutations correlate strongly with genomic biomarkers of response to immunity checkpoint inhibitors in urothelial bladder cancer

(2021) Ramon Gonzalez Manzano et al.   BMC CANCER

The potential diagnosis role of TP53 mutation in advanced bladder cancer: A meta‐analysis

(2021) Yihao Liao et al.   JOURNAL OF CLINICAL LABORATORY ANALYSIS

ABCA1, TCF7, NFATC1, PRKCZ, and PDGFA DNA methylation as potential epigenetic-sensitive targets in acute coronary syndrome via network analysis

(2021) Teresa Infante et al.   Epigenetics

gutMGene: a comprehensive database for target genes of gut microbes and microbial metabolites

(2021) Liang Cheng et al.   NUCLEIC ACIDS RESEARCH

EP300 mutation is associated with tumor mutation burden and promotes antitumor immunity in bladder cancer patients

(2020) Gongmin Zhu et al.   Aging-US

Identifying Breast Cancer-induced gene perturbations and its application in guiding drug repurposing

(2020) Jujuan Zhuang et al.   Current Bioinformatics

Basic polar and hydrophobic properties are the main characteristics that affect the binding of transcription factors to methylation sites

(2020) Zijie Shen et al.   BIOINFORMATICS

Integrated Analysis of mRNA-seq and miRNA-seq to Identify c-MYC, YAP1 and miR-3960 as Major Players in the Anticancer Effects of Caffeic Acid Phenethyl ester in Human Small Cell Lung Cancer Cell Line

(2020) Fei Mo et al.   CURRENT GENE THERAPY

Potential Prognostic Predictors and Molecular Targets for Skin Melanoma Screened by Weighted Gene Co-expression Network Analysis

(2020) Sichao Chen et al.   CURRENT GENE THERAPY

An Unbiased Predictive Model to Detect DNA Methylation Propensity of CpG Islands in the Human Genome

(2020) Dicle Yalcin et al.   Current Bioinformatics

Delineating characteristic sequence and structural features of precursor and mature Piwi-interacting RNAs of epithelial ovarian cancer

(2020) Garima Singh et al.   Current Bioinformatics

Colorectal Cancer Classification and Survival Analysis Based on an Integrated RNA and DNA molecular signature

(2020) Mohanad Mohammed et al.   Current Bioinformatics

Gene therapy, a novel therapeutic tool for neurological disorders: Current progress, challenges and future prospective

(2020) Ashif Iqubal et al.   CURRENT GENE THERAPY

Promising Gene Therapy Using an Adenovirus Vector Carrying REIC/Dkk-3 Gene for the Treatment of Biliary Cancer

(2020) Emi Tanaka et al.   CURRENT GENE THERAPY

Strategic Developments & Future Perspective on Gene therapy of Breast Cancer: Role of mTOR and Brk/ PTK6 as Molecular Targets

(2020) Roja Sahu et al.   CURRENT GENE THERAPY

Identification of biomarkers and functional modules from genomic data in stage-wise breast cancer

(2020) Athira K et al.   Current Bioinformatics

An 18-gene signature based on glucose metabolism and DNA methylation improves prognostic prediction for urinary bladder cancer

(2020) Zhuonan Liu et al.   GENOMICS

EGLN2 DNA methylation and expression interact with HIF1A to affect survival of early-stage NSCLC

(2019) Ruyang Zhang et al.   Epigenetics

YWHAZ amplification/overexpression defines aggressive bladder cancer and contributes to chemo‐/radio‐resistance by suppressing caspase‐mediated apoptosis

(2019) Chia‐Cheng Yu et al.   JOURNAL OF PATHOLOGY

Analysis on epigenetic signature of cell reprogramming by computational DNA methylation profiles

(2019) Yongchun Zuo et al.   Current Bioinformatics

Epigenetic priming sensitizes gastric cancer cells to irinotecan and cisplatin by restoring multiple pathways

(2019) Hiroshi Moro et al.   Gastric Cancer

Computational methods for identifying similar diseases

(2019) Liang Cheng et al.   Molecular Therapy-Nucleic Acids

Model with the GBDT for colorectal adenoma risk diagnosis

(2019) Junbo Gao et al.   Current Bioinformatics

gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions

(2019) Liang Cheng et al.   NUCLEIC ACIDS RESEARCH

An analysis about heterogeneity among cancers based on the DNA methylation patterns

(2019) Yang Liu et al.   BMC CANCER

DincRNA: a comprehensive web-based bioinformatics toolkit for exploring disease associations and ncRNA function

(2018) Liang Cheng et al.   BIOINFORMATICS

Prognostic value of DNA methylation for bladder cancer

(2018) Yinghui Yu et al.   CLINICA CHIMICA ACTA

Prognostic Value of Soluble Death Receptor Ligands in Patients with Transitional Cell Carcinoma of Bladder

(2018) Islem Ben Bahria-Sediki et al.   UROLOGIA INTERNATIONALIS

Microarray-based analysis of whole-genome DNA methylation profiling in early detection of breast cancer

(2018) Shao-Ying Li et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Genetic data from nearly 63,000 women of European descent predicts DNA methylation biomarkers and epithelial ovarian cancer risk

(2018) Yaohua Yang et al.   CANCER RESEARCH

Analysis of the prognostic relevance of sex-steroid hormonal receptor mRNA expression in muscle-invasive urothelial carcinoma of the urinary bladder

(2018) Philipp Erben et al.   VIRCHOWS ARCHIV

Initiation of aberrant DNA methylation patterns and heterogeneity in precancerous lesions of human hepatocellular cancer

(2017) Ryan A. Hlady et al.   Epigenetics

The SMAD2/3 pathway is involved in hepaCAM-induced apoptosis by inhibiting the nuclear translocation of SMAD2/3 in bladder cancer cells

(2016) Xiaorong Wang et al.   TUMOR BIOLOGY

Discovery of new methylation markers to improve screening for cervical intraepithelial neoplasia grade 2/3

(2016) A. Boers et al.   Clinical Epigenetics

Differences in DNA Methylation Signatures Reveal Multiple Pathways of Progression From Adenoma to Colorectal Cancer

(2014) Yanxin Luo et al.   GASTROENTEROLOGY

DNA Methylation in Mammals

(2014) E. Li et al.   Cold Spring Harbor Perspectives in Biology

Epigenetic mechanisms of breast cancer: an update of the current knowledge

(2014) Seher Karsli-Ceppioglu et al.   Epigenomics

The Cancer Genome Atlas Pan-Cancer analysis project

(2013) John N Weinstein et al.   NATURE GENETICS

DNA and histone methylation in gastric carcinogenesis

(2013) Danielle Queiroz Calcagno   WORLD JOURNAL OF GASTROENTEROLOGY

Hypermethylation of the PRKCZ Gene in Type 2 Diabetes Mellitus

(2013) Li Zou et al.   Journal of Diabetes Research

Whole-genome methylation analysis of benign and malignant colorectal tumours

(2012) Andrew D Beggs et al.   JOURNAL OF PATHOLOGY

Identification and validation of highly frequent CpG island hypermethylation in colorectal adenomas and carcinomas

(2011) Bodil Øster et al.   INTERNATIONAL JOURNAL OF CANCER

Epigenetics and colorectal cancer

(2011) Victoria Valinluck Lao et al.   Nature Reviews Gastroenterology & Hepatology

Increased number of methylated CpG islands correlates with Helicobacter pylori infection, histological and serological severity of chronic gastritis

(2009) Tomomitsu Tahara et al.   EUROPEAN JOURNAL OF GASTROENTEROLOGY & HEPATOLOGY

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH