Genome-Wide and Exome-Capturing Sequencing of a Gamma-Ray-Induced Mutant Reveals Biased Variations in Common Wheat

Assessment of efficacy of mutagenesis of gamma-irradiation in plant height and days to maturity through expression analysis in rice

(2021) Andrew-Peter-Leon M. T. et al.   PLoS One

Prospects of Developing Novel Genetic Resources by Chemical and Physical Mutagenesis to Enlarge the Genetic Window in Bread Wheat Varieties

(2021) Momina Hussain et al.   Agriculture-Basel

A review on the genetic resources, domestication and breeding history of spinach (Spinacia oleracea L.)

(2020) Arnau Ribera et al.   EUPHYTICA

Identification of the vernalization gene VRN-B1 responsible for heading date variation by QTL mapping using a RIL population in wheat

(2020) Yuting Li et al.   BMC PLANT BIOLOGY

Characterization of γ-Radiation-Induced DNA Polymorphisms in the M1 Population of the Japonica Rice Variety Gaogengnuo by Whole-Genome Resequencing

(2020) L. Zhang et al.   RUSSIAN JOURNAL OF GENETICS

The Selection of Gamma-Ray Irradiated Higher Yield Rice Mutants by Directed Evolution Method

(2020) Hiroshi Kato et al.   Plants-Basel

A Novel Double-flowered Cultivar of Gypsophila paniculata Mutagenized by 60Co γ-Ray

(2020) Fan Li et al.   HORTSCIENCE

Induced mutation breeding for qualitative and quantitative traits and varietal development in medicinal and aromatic crops at CSIR-CIMAP, Lucknow (India): Past and recent accomplishment

(2020) R.K. Lal et al.   INTERNATIONAL JOURNAL OF RADIATION BIOLOGY

Discovery of a Novel Induced Polymorphism in SD1 Gene Governing Semi-Dwarfism in Rice and Development of a Functional Marker for Marker-Assisted Selection

(2020) Shivashankar Bhuvaneswari et al.   Plants-Basel

Intense Floral Scent Emission in Polianthes tuberosa L. (Tuberose) Variants Sprouted from γ-Irradiated Tubers

(2019) Nithya N. Kutty et al.   JOURNAL OF PLANT GROWTH REGULATION

Mutation Breeding in Tomato: Advances, Applicability and Challenges

(2019) Juhi Chaudhary et al.   Plants-Basel

Comparison and Characterization of Mutations Induced by Gamma-Ray and Carbon-Ion Irradiation in Rice (Oryza sativa L.) Using Whole-Genome Resequencing

(2019) Feng Li et al.   G3-Genes Genomes Genetics

Transcriptome sequencing reveals hotspot mutation regions and dwarfing mechanisms in wheat mutants induced by γ-ray irradiation and EMS

(2019) Hongchun Xiong et al.   JOURNAL OF RADIATION RESEARCH

Comparative transcriptome analysis of two common wheat varieties induced by 7Li-ion beam irradiation reveals mutation hotspot regions and associated pathways

(2019) Hongchun Xiong et al.   RADIATION PHYSICS AND CHEMISTRY

Shifting the limits in wheat research and breeding using a fully annotated reference genome

(2018) et al.   SCIENCE

Mechanisms of DNA damage, repair, and mutagenesis

(2017) Nimrat Chatterjee et al.   ENVIRONMENTAL AND MOLECULAR MUTAGENESIS

Uncovering hidden variation in polyploid wheat

(2017) Ksenia V. Krasileva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

From Genomes to GENE-omes: Exome Sequencing Concept and Applications in Crop Improvement

(2017) Parampreet Kaur et al.   Frontiers in Plant Science

RNAseq analysis reveals pathways and candidate genes associated with salinity tolerance in a spaceflight-induced wheat mutant

(2017) Hongchun Xiong et al.   Scientific Reports

Genome-Wide Sequencing of 41 Rice ( Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation

(2016) Guotian Li et al.   Molecular Plant

Genome-wide survey of artificial mutations induced by ethyl methanesulfonate and gamma rays in tomato

(2015) Kenta Shirasawa et al.   PLANT BIOTECHNOLOGY JOURNAL

Understanding crop genetic diversity under modern plant breeding

(2015) Yong-Bi Fu   THEORETICAL AND APPLIED GENETICS

Doubling down on genomes: Polyploidy and crop plants

(2014) Simon Renny-Byfield et al.   AMERICAN JOURNAL OF BOTANY

Genome-wide analysis of radiation-induced mutations in rice (Oryza sativa L. ssp. indica)

(2014) Zuxin Cheng et al.   Molecular BioSystems

TILLINGin extremis

(2012) Trevor L. Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

The Mechanisms of UV Mutagenesis

(2011) Hironobu IKEHATA et al.   JOURNAL OF RADIATION RESEARCH

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

A modified TILLING approach to detect induced mutations in tetraploid and hexaploid wheat

(2009) Cristobal Uauy et al.   BMC PLANT BIOLOGY

Mutation discovery for crop improvement

(2009) M. A. J. Parry et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Modified TILLING Method for Wheat Breeding

(2009) Chongmei Dong et al.   Plant Genome