Taxonomic and Functional Diversity of Rhizosphere Microbiome Recruited From Compost Synergistically Determined by Plant Species and Compost

Chemotaxis of Beneficial Rhizobacteria to Root Exudates: The First Step towards Root–Microbe Rhizosphere Interactions

(2021) Haichao Feng et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Long-term organic fertilizer substitution increases rice yield by improving soil properties and regulating soil bacteria

(2021) Jiai Liu et al.   GEODERMA

High abundance of Ralstonia solanacearum changed tomato rhizosphere microbiome and metabolome

(2020) Tao Wen et al.   BMC PLANT BIOLOGY

Insights into bacterial diversity in compost: Core microbiome and prevalence of potential pathogenic bacteria

(2020) Yue Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Increased organic fertilizer application and reduced chemical fertilizer application affect the soil properties and bacterial communities of grape rhizosphere soil

(2020) Linnan Wu et al.   Scientific Reports

A Compost Treatment Acts as a Suppressive Agent in Phytophthora capsici – Cucurbita pepo Pathosystem by Modifying the Rhizosphere Microbiota

(2020) Alessio Bellini et al.   Frontiers in Plant Science

Microbial community composition in the rhizosphere of Larix decidua under different light regimes with additional focus on methane cycling microorganisms

(2020) Nadine Praeg et al.   Scientific Reports

Isolation of Burkholderia sp. HQB-1, A Promising Biocontrol Bacteria to Protect Banana Against Fusarium Wilt Through Phenazine-1-Carboxylic Acid Secretion

(2020) Zhizhou Xu et al.   Frontiers in Microbiology

Compost and Sewage Sludge for the Improvement of Soil Chemical and Biological Quality of Mediterranean Agroecosystems

(2020) Enrica Picariello et al.   Sustainability

A Biocontrol Strain of Pseudomonas aeruginosa CQ-40 Promote Growth and Control Botrytis cinerea in Tomato

(2020) Xingyuan Wang et al.   Pathogens

Root Exudation of Primary Metabolites: Mechanisms and Their Roles in Plant Responses to Environmental Stimuli

(2019) Alberto Canarini et al.   Frontiers in Plant Science

Microbial Community Succession and Response to Environmental Variables During Cow Manure and Corn Straw Composting

(2019) Qingxin Meng et al.   Frontiers in Microbiology

Long-Term Organic Farming Manipulated Rhizospheric Microbiome and Bacillus Antagonism Against Pepper Blight (Phytophthora capsici)

(2019) Huixiu Li et al.   Frontiers in Microbiology

Reshaping the rhizosphere microbiome by bio-organic amendment to enhance crop yield in a maize-cabbage rotation system

(2019) Cece Qiao et al.   APPLIED SOIL ECOLOGY

Bacillus subtilis: A plant-growth promoting rhizobacterium that also impacts biotic stress

(2019) Abeer Hashem et al.   SAUDI JOURNAL OF BIOLOGICAL SCIENCES

Deconstructing the Polymerase Chain Reaction II: an improved workflow and effects on artifact formation and primer degeneracy

(2019) Ankur Naqib et al.   PeerJ

Beyond pathogens: microbiota interactions with the plant immune system

(2019) Paulo José PL Teixeira et al.   CURRENT OPINION IN MICROBIOLOGY

Initial soil microbiome composition and functioning predetermine future plant health

(2019) Zhong Wei et al.   Science Advances

Phylogenetic analysis of halophyte‐associated rhizobacteria and effect of halotolerant and halophilic phosphate‐solubilizing biofertilizers on maize growth under salinity stress conditions

(2019) S. Mukhtar et al.   JOURNAL OF APPLIED MICROBIOLOGY

Bacterial communities in the rhizosphere, phyllosphere and endosphere of tomato plants

(2019) Chun-Juan Dong et al.   PLoS One

Composting of food wastes: Status and challenges

(2018) Alejandra Cerda et al.   BIORESOURCE TECHNOLOGY

Soil amendment alters soil physicochemical properties and bacterial community structure of a replanted apple orchard

(2018) Bowen Liang et al.   MICROBIOLOGICAL RESEARCH

Modeling nitrous oxide emissions from three United Kingdom farms following application of farmyard manure and green compost

(2018) Jiacheng Shen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Rhizosphere microbiome structure alters to enable wilt resistance in tomato

(2018) Min-Jung Kwak et al.   NATURE BIOTECHNOLOGY

Resistance against Ralstonia solanacearum in tomato depends on the methionine cycle and the γ-aminobutyric acid metabolic pathway

(2018) Guoping Wang et al.   PLANT JOURNAL

Variations in Soil Bacterial Community Diversity and Structures Among Different Revegetation Types in the Baishilazi Nature Reserve

(2018) Jiaojiao Deng et al.   Frontiers in Microbiology

Environmental and human health challenges of industrial livestock and poultry farming in China and their mitigation

(2017) Yuanan Hu et al.   ENVIRONMENT INTERNATIONAL

Embracing the unknown: disentangling the complexities of the soil microbiome

(2017) Noah Fierer   NATURE REVIEWS MICROBIOLOGY

Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities

(2017) T. S. George et al.   PLANT AND SOIL

The influence of different concentrations of bio-organic fertilizer on cucumber Fusarium wilt and soil microflora alterations

(2017) Nan Huang et al.   PLoS One

Bio-fertilizer application induces soil suppressiveness against Fusarium wilt disease by reshaping the soil microbiome

(2017) Wu Xiong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Manure and mineral fertilization change enzyme activity and bacterial community in millet rhizosphere soils

(2017) Lixia Xu et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Bacillus As Potential Probiotics: Status, Concerns, and Future Perspectives

(2017) Fouad M. F. Elshaghabee et al.   Frontiers in Microbiology

Microbial Phosphorus Solubilization and Its Potential for Use in Sustainable Agriculture

(2017) Elizabeth T. Alori et al.   Frontiers in Microbiology

Rhizosphere Microbiome Recruited from a Suppressive Compost Improves Plant Fitness and Increases Protection against Vascular Wilt Pathogens of Tomato

(2017) Anastasis Antoniou et al.   Frontiers in Plant Science

The Role of Soil Microorganisms in Plant Mineral Nutrition—Current Knowledge and Future Directions

(2017) Richard Jacoby et al.   Frontiers in Plant Science

Effects of Long-Term Use of Compost on N2O and CO2 Fluxes in Greenhouse Vegetable Systems

(2016) Hui Han et al.   COMPOST SCIENCE & UTILIZATION

Nitrogen, Phosphorus, and Potassium Flows through the Manure Management Chain in China

(2016) Zhaohai Bai et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea

(2016) Hanin Alzubaidy et al.   GENE

Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics

(2016) Luciana Principal Antunes et al.   Scientific Reports

Hydrogen Cyanide in the Rhizosphere: Not Suppressing Plant Pathogens, but Rather Regulating Availability of Phosphate

(2016) Tomaž Rijavec et al.   Frontiers in Microbiology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Back from the dead; the curious tale of the predatory cyanobacteriumVampirovibrio chlorellavorus

(2015) Rochelle M. Soo et al.   PeerJ

Pyrrolnitrin and Hydrogen Cyanide Production by Pseudomonas chlororaphis Strain PA23 Exhibits Nematicidal and Repellent Activity against Caenorhabditis elegans

(2015) Munmun Nandi et al.   PLoS One

Pseudomonaschemotaxis

(2014) Inmaculada Sampedro et al.   FEMS MICROBIOLOGY REVIEWS

Potential Role of Flavobacterial Gliding-Motility and Type IX Secretion System Complex in Root Colonization and Plant Defense

(2014) Max Kolton et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

An introduction to the analysis of shotgun metagenomic data

(2014) Thomas J. Sharpton   Frontiers in Plant Science

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana

(2013) Natacha Bodenhausen et al.   PLoS One

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Compost: Its role, mechanism and impact on reducing soil-borne plant diseases

(2013) C.M. Mehta et al.   WASTE MANAGEMENT

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

(2012) Joyce E. Loper et al.   PLoS Genetics

Control of cotton Verticillium wilt and fungal diversity of rhizosphere soils by bio-organic fertilizer

(2011) Jiaojiao Lang et al.   BIOLOGY AND FERTILITY OF SOILS

Suppressive compost: when plant pathology met microbial ecology

(2011) Yitzhak Hadar   PHYTOPARASITICA

Origins and Evolution of Antibiotic Resistance

(2010) J. Davies et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil

(2010) Stéphane Uroz et al.   Environmental Microbiology Reports