Competitive strategies differentiate closely related species of marine actinobacteria

Explaining microbial genomic diversity in light of evolutionary ecology

(2014) Otto X. Cordero et al.   NATURE REVIEWS MICROBIOLOGY

Competition-dispersal tradeoff ecologically differentiates recently speciated marine bacterioplankton populations

(2014) Y. Yawata et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora

(2014) N. Ziemert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biogeographic patterns in ocean microbes emerge in a neutral agent-based model

(2014) F. L. Hellweger et al.   SCIENCE

A Systematic Computational Analysis of Biosynthetic Gene Cluster Evolution: Lessons for Engineering Biosynthesis

(2014) Marnix H. Medema et al.   PLoS Computational Biology

Salinispora pacifica sp. nov., an actinomycete from marine sediments

(2013) Lina Ahmed et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Multilocus Sequence Typing Reveals Evidence of Homologous Recombination Linked to Antibiotic Resistance in the Genus Salinispora

(2013) Kelle C. Freel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Sympatric inhibition and niche differentiation suggest alternative coevolutionary trajectories among Streptomycetes

(2013) Linda L Kinkel et al.   ISME Journal

Detecting Sequence Homology at the Gene Cluster Level with MultiGeneBlast

(2013) Marnix H. Medema et al.   MOLECULAR BIOLOGY AND EVOLUTION

Insights into the phylogeny and coding potential of microbial dark matter

(2013) Christian Rinke et al.   NATURE

Subinhibitory Antibiotic Concentrations Mediate Nutrient Use and Competition among Soil Streptomyces

(2013) Patricia Vaz Jauri et al.   PLoS One

Pattern and synchrony of gene expression among sympatric marine microbial populations

(2013) E. A. Ottesen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Glycolytic strategy as a tradeoff between energy yield and protein cost

(2013) A. Flamholz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters

(2013) M. Hugoni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Antagonistic interactions between heterotrophic bacteria as a potential regulator of community structure of hypersaline microbial mats

(2012) Richard A. Long et al.   FEMS MICROBIOLOGY ECOLOGY

Iron acquisition in the marine actinomycete genusSalinisporais controlled by the desferrioxamine family of siderophores

(2012) Alexandra A. Roberts et al.   FEMS MICROBIOLOGY LETTERS

Antagonism influences assembly of a Bacillus guild in a local community and is depicted as a food-chain network

(2012) Rocío-Anaís Pérez-Gutiérrez et al.   ISME Journal

The Natural Product Domain Seeker NaPDoS: A Phylogeny Based Bioinformatic Tool to Classify Secondary Metabolite Gene Diversity

(2012) Nadine Ziemert et al.   PLoS One

Mass spectral molecular networking of living microbial colonies

(2012) J. Watrous et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ecological Populations of Bacteria Act as Socially Cohesive Units of Antibiotic Production and Resistance

(2012) O. X. Cordero et al.   SCIENCE

Evolution of Secondary Metabolite Genes in Three Closely Related Marine Actinomycete Species

(2011) Kelle C. Freel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microdiversity and evidence for high dispersal rates in the marine actinomycete ‘Salinispora pacifica’

(2011) Kelle C. Freel et al.   ENVIRONMENTAL MICROBIOLOGY

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

(2011) Marnix H. Medema et al.   NUCLEIC ACIDS RESEARCH

Systems-level analysis of microbial community organization through combinatorial labeling and spectral imaging

(2011) A. M. Valm et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interspecies interactions that result in Bacillus subtilis forming biofilms are mediated mainly by members of its own genus

(2011) E. A. Shank et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure and Evolution of Streptomyces Interaction Networks in Soil and In Silico

(2011) Kalin Vetsigian et al.   PLOS BIOLOGY

In VitroActivity and Single-Step Mutational Analysis of Rifamycin SV Tested against Enteropathogens Associated with Traveler's Diarrhea andClostridium difficile

(2010) David J. Farrell et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Diversity of Mycobacterium species from marine sponges and their sensitivity to antagonism by sponge-derived rifamycin-synthesizing actinobacterium in the genus Salinispora

(2010) Hiroshi Izumi et al.   FEMS MICROBIOLOGY LETTERS

Evolutionary divergence and biogeography of sympatric niche-differentiated bacterial populations

(2010) Brian B Oakley et al.   ISME Journal

Antagonistic interactions among coral-associated bacteria

(2009) Krystal L. Rypien et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean

(2009) Regina Schauer et al.   ISME Journal

High-resolution imaging of pelagic bacteria by Atomic Force Microscopy and implications for carbon cycling

(2009) Francesca Malfatti et al.   ISME Journal

Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria

(2009) Kevin Penn et al.   ISME Journal

Linking species concepts to natural product discovery in the post-genomic era

(2009) Paul R. Jensen   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

Bacterial competition: surviving and thriving in the microbial jungle

(2009) Michael E. Hibbing et al.   NATURE REVIEWS MICROBIOLOGY

The Bacterial Species Challenge: Making Sense of Genetic and Ecological Diversity

(2009) C. Fraser et al.   SCIENCE

Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities

(2008) Ainslie E.F. Little et al.   Annual Review of Microbiology

Antagonism betweenBacillus cereusandPseudomonas fluorescensin planktonic systems and in biofilms

(2008) Manuel Simões et al.   BIOFOULING

Uptake of molybdenum and vanadium by a nitrogen-fixing soil bacterium using siderophores

(2008) J. P. Bellenger et al.   Nature Geoscience

Identifying the fundamental units of bacterial diversity: A paradigm shift to incorporate ecology into bacterial systematics

(2008) A. Koeppel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Resource Partitioning and Sympatric Differentiation Among Closely Related Bacterioplankton

(2008) D. E. Hunt et al.   SCIENCE