Screening by deep sequencing reveals mediators of microRNA tailing in C. elegans
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Title
Screening by deep sequencing reveals mediators of microRNA tailing in C. elegans
Authors
Keywords
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Journal
NUCLEIC ACIDS RESEARCH
Volume 49, Issue 19, Pages 11167-11180
Publisher
Oxford University Press (OUP)
Online
2021-09-10
DOI
10.1093/nar/gkab840
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Note: Only part of the references are listed.- An expanded auxin-inducible degron toolkit for Caenorhabditis elegans
- (2021) Guinevere Ashley et al. GENETICS
- A Mechanism for microRNA Arm Switching Regulated by Uridylation
- (2020) Haedong Kim et al. MOLECULAR CELL
- AGO-bound mature miRNAs are oligouridylated by TUTs and subsequently degraded by DIS3L2
- (2020) Acong Yang et al. Nature Communications
- MicroRNAs: From Mechanism to Organism
- (2020) Philipp J. Dexheimer et al. Frontiers in Cell and Developmental Biology
- Two MicroRNAs Are Sufficient for Embryonic Patterning in C. elegans
- (2020) Philipp J. Dexheimer et al. CURRENT BIOLOGY
- Unbiased screen of RNA tailing activities reveals a poly(UG) polymerase
- (2019) Melanie A. Preston et al. NATURE METHODS
- Structural Basis for Target-Directed MicroRNA Degradation
- (2019) Jessica Sheu-Gruttadauria et al. MOLECULAR CELL
- Time-Resolved Small RNA Sequencing Unravels the Molecular Principles of MicroRNA Homeostasis
- (2019) Brian Reichholf et al. MOLECULAR CELL
- 3′ Uridylation Confers miRNAs with Non-canonical Target Repertoires
- (2019) Acong Yang et al. MOLECULAR CELL
- Global analyses of the dynamics of mammalian microRNA metabolism
- (2019) Elena Kingston et al. GENOME RESEARCH
- A Network of Noncoding Regulatory RNAs Acts in the Mammalian Brain
- (2018) Benjamin Kleaveland et al. CELL
- MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
- (2018) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- MicroRNA degradation by a conserved target RNA regulates animal behavior
- (2018) Angelo Bitetti et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- MicroRNA degradation by a conserved target RNA regulates animal behavior
- (2018) Angelo Bitetti et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Endogenous transcripts control miRNA levels and activity in mammalian cells by target-directed miRNA degradation
- (2018) Francesco Ghini et al. Nature Communications
- The balance of poly(U) polymerase activity ensures germline identity, survival and development in Caenorhabditis elegans
- (2018) Yini Li et al. DEVELOPMENT
- Evolution of miRNA Tailing by 3′ Terminal Uridylyl Transferases in Metazoa
- (2017) Vengamanaidu Modepalli et al. Genome Biology and Evolution
- Tudor-SN–mediated endonucleolytic decay of human cell microRNAs promotes G1/S phase transition
- (2017) Reyad A. Elbarbary et al. SCIENCE
- Loss of a mammalian circular RNA locus causes miRNA deregulation and affects brain function
- (2017) Monika Piwecka et al. SCIENCE
- RNA uridylation: a key posttranscriptional modification shaping the coding and noncoding transcriptome
- (2017) Caroline De Almeida et al. Wiley Interdisciplinary Reviews-RNA
- The RNase PARN-1 Trims piRNA 3′ Ends to Promote Transcriptome Surveillance in C. elegans
- (2016) Wen Tang et al. CELL
- Degradation dynamics of microRNAs revealed by a novel pulse-chase approach
- (2016) Matteo J. Marzi et al. GENOME RESEARCH
- Identification of factors involved in target RNA-directed microRNA degradation
- (2016) Gabrielle Haas et al. NUCLEIC ACIDS RESEARCH
- miTRATA: a web-based tool formicroRNATruncationandTailingAnalysis
- (2015) Parth Patel et al. BIOINFORMATICS
- TUT7 controls the fate of precursor microRNAs by using three different uridylation mechanisms
- (2015) B. Kim et al. EMBO JOURNAL
- Potent degradation of neuronal miRNAs induced by highly complementary targets
- (2015) M. de la Mata et al. EMBO REPORTS
- Streamlined Genome Engineering with a Self-Excising Drug Selection Cassette
- (2015) Daniel J. Dickinson et al. GENETICS
- Selective Suppression of the Splicing-Mediated MicroRNA Pathway by the Terminal Uridyltransferase Tailor
- (2015) Diane Bortolamiol-Becet et al. MOLECULAR CELL
- Uridylation of RNA Hairpins by Tailor Confines the Emergence of MicroRNAs in Drosophila
- (2015) Madalena M. Reimão-Pinto et al. MOLECULAR CELL
- Destabilization of microRNAs in human cells by 3′ deadenylation mediated by PARN and CUGBP1
- (2015) Takayuki Katoh et al. NUCLEIC ACIDS RESEARCH
- Streamlined Genome Engineering with a Self-Excising Drug Selection Cassette
- (2015) Daniel J. Dickinson et al. GENETICS
- Efficient Marker-Free Recovery of Custom Genetic Modifications with CRISPR/Cas9 in Caenorhabditis elegans
- (2014) J. A. Arribere et al. GENETICS
- Adenylation of Maternally Inherited MicroRNAs by Wispy
- (2014) Mihye Lee et al. MOLECULAR CELL
- Regulation of microRNA biogenesis
- (2014) Minju Ha et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Engineering of a conditional allele reveals multiple roles of XRN2 in Caenorhabditis elegans development and substrate specificity in microRNA turnover
- (2014) Takashi S. Miki et al. NUCLEIC ACIDS RESEARCH
- Selective microRNA uridylation by Zcchc6 (TUT7) and Zcchc11 (TUT4)
- (2014) James E. Thornton et al. NUCLEIC ACIDS RESEARCH
- High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
- (2013) Z. Shi et al. GENOME RESEARCH
- The Decapping Scavenger Enzyme DCS-1 Controls MicroRNA Levels in Caenorhabditis elegans
- (2013) Gabriel D. Bossé et al. MOLECULAR CELL
- A role for the Perlman syndrome exonuclease Dis3l2 in the Lin28–let-7 pathway
- (2013) Hao-Ming Chang et al. NATURE
- Heritable genome editing in C. elegans via a CRISPR-Cas9 system
- (2013) Ari E Friedland et al. NATURE METHODS
- miRBase: annotating high confidence microRNAs using deep sequencing data
- (2013) Ana Kozomara et al. NUCLEIC ACIDS RESEARCH
- Mammalian DIS3L2 exoribonuclease targets the uridylated precursors of let-7 miRNAs
- (2013) D. Ustianenko et al. RNA
- Poly(A)-Specific Ribonuclease Mediates 3′-End Trimming of Argonaute2-Cleaved Precursor MicroRNAs
- (2013) Mayuko Yoda et al. Cell Reports
- Mono-Uridylation of Pre-MicroRNA as a Key Step in the Biogenesis of Group II let-7 MicroRNAs
- (2012) Inha Heo et al. CELL
- Improved Mos1-mediated transgenesis in C. elegans
- (2012) Christian Frøkjær-Jensen et al. NATURE METHODS
- Post-developmental microRNA expression is required for normal physiology, and regulates aging in parallel to insulin/IGF-1 signaling in C. elegans
- (2012) N. J. Lehrbach et al. RNA
- Specific miRNA Stabilization by Gld2-Catalyzed Monoadenylation
- (2012) Andrea D’Ambrogio et al. Cell Reports
- Degradation of Cellular miR-27 by a Novel, Highly Abundant Viral Transcript Is Important for Efficient Virus Replication In Vivo
- (2012) Lisa Marcinowski et al. PLoS Pathogens
- Kinetic Analysis Reveals the Fate of a MicroRNA following Target Regulation in Mammalian Cells
- (2011) Alessia Baccarini et al. CURRENT BIOLOGY
- MicroRNAs and developmental timing
- (2011) Victor Ambros CURRENT OPINION IN GENETICS & DEVELOPMENT
- Target-Mediated Protection of Endogenous MicroRNAs in C. elegans
- (2011) Saibal Chatterjee et al. DEVELOPMENTAL CELL
- Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity
- (2011) S. K. Wyman et al. GENOME RESEARCH
- MicroRNA Destabilization Enables Dynamic Regulation of the miR-16 Family in Response to Cell-Cycle Changes
- (2011) Olivia S. Rissland et al. MOLECULAR CELL
- CPEB and two poly(A) polymerases control miR-122 stability and p53 mRNA translation
- (2011) David M. Burns et al. NATURE
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- (2011) Michael P. Gantier et al. NUCLEIC ACIDS RESEARCH
- Murine cytomegalovirus encodes a miR-27 inhibitor disguised as a target
- (2011) V. Libri et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Common and distinct patterns of terminal modifications to mirtrons and canonical microRNAs
- (2011) J. O. Westholm et al. RNA
- Characterizing Light-Regulated Retinal MicroRNAs Reveals Rapid Turnover as a Common Property of Neuronal MicroRNAs
- (2010) Jacek Krol et al. CELL
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- (2010) Ezequiel Alvarez-Saavedra et al. CURRENT BIOLOGY
- Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
- (2010) H. R. Chiang et al. GENES & DEVELOPMENT
- Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
- (2010) W.-J. Chung et al. GENOME RESEARCH
- A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness
- (2010) A. M. Burroughs et al. GENOME RESEARCH
- Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
- (2010) E. Berezikov et al. GENOME RESEARCH
- Differential regulation of microRNA stability
- (2010) S. Bail et al. RNA
- Down-Regulation of a Host MicroRNA by a Herpesvirus saimiri Noncoding RNA
- (2010) D. Cazalla et al. SCIENCE
- Target RNA-Directed Trimming and Tailing of Small Silencing RNAs
- (2010) S. L. Ameres et al. SCIENCE
- CDE-1 Affects Chromosome Segregation through Uridylation of CSR-1-Bound siRNAs
- (2009) Josien C. van Wolfswinkel et al. CELL
- TUT4 in Concert with Lin28 Suppresses MicroRNA Biogenesis through Pre-MicroRNA Uridylation
- (2009) Inha Heo et al. CELL
- Selective stabilization of mammalian microRNAs by 3' adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2
- (2009) T. Katoh et al. GENES & DEVELOPMENT
- Active turnover modulates mature microRNA activity in Caenorhabditis elegans
- (2009) Saibal Chatterjee et al. NATURE
- Large-scale sorting of C. elegans embryos reveals the dynamics of small RNA expression
- (2009) Marlon Stoeckius et al. NATURE METHODS
- Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
- (2009) Masaomi Kato et al. GENOME BIOLOGY
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- 3′ UTRs Are the Primary Regulators of Gene Expression in the C. elegans Germline
- (2008) Christopher Merritt et al. CURRENT BIOLOGY
- Lin28 Mediates the Terminal Uridylation of let-7 Precursor MicroRNA
- (2008) Inha Heo et al. MOLECULAR CELL
- PRG-1 and 21U-RNAs Interact to Form the piRNA Complex Required for Fertility in C. elegans
- (2008) Pedro J. Batista et al. MOLECULAR CELL
- Single-copy insertion of transgenes in Caenorhabditis elegans
- (2008) Christian Frøkjær-Jensen et al. NATURE GENETICS
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