Comparative physiological and transcriptomic analyses illuminate common mechanisms by which silicon alleviates cadmium and arsenic toxicity in rice seedlings

Cadmium contamination in agricultural soils of China and the impact on food safety

(2019) Peng Wang et al.   ENVIRONMENTAL POLLUTION

A transcriptomic (RNA-seq) analysis of genes responsive to both cadmium and arsenic stress in rice root

(2019) Yingmei Huang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Cadmium and Plant Development: An Agony from Seed to Seed

(2019) Michiel Huybrechts et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The role of silicon in plant biology: a paradigm shift in research approach

(2018) Adam Frew et al.   ANNALS OF BOTANY

The walnut JrVHAG1 gene is involved in cadmium stress response through ABA-signal pathway and MYB transcription regulation

(2018) Zhenggang Xu et al.   BMC PLANT BIOLOGY

Heavy metal pollution and health risk assessment of agricultural soils in a typical peri-urban area in southeast China

(2018) Ying Huang et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Rice seed priming with Se : A novel approach to mitigate As induced adverse consequences on growth, yield and As load in brown rice

(2018) Debojyoti Moulick et al.   JOURNAL OF HAZARDOUS MATERIALS

The controversies of silicon's role in plant biology

(2018) Devrim Coskun et al.   NEW PHYTOLOGIST

Foliar spraying with silicon and selenium reduces cadmium uptake and mitigates cadmium toxicity in rice

(2018) Min Gao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Silica nanoparticles alleviate cadmium toxicity in rice cells: Mechanisms and size effects

(2017) Jianghu Cui et al.   ENVIRONMENTAL POLLUTION

Arsenic uptake, accumulation and toxicity in rice plants: Possible remedies for its detoxification: A review

(2017) Hafiz Faiq Bakhat et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update

(2017) Tian Tian et al.   NUCLEIC ACIDS RESEARCH

OsARM1, an R2R3 MYB Transcription Factor, Is Involved in Regulation of the Response to Arsenic Stress in Rice

(2017) Feng-Zhu Wang et al.   Frontiers in Plant Science

Toxic Heavy Metal and Metalloid Accumulation in Crop Plants and Foods

(2016) Stephan Clemens et al.   Annual Review of Plant Biology

The availabilities of arsenic and cadmium in rice paddy fields from a mining area: The role of soil extractable and plant silicon

(2016) Huan-Yun Yu et al.   ENVIRONMENTAL POLLUTION

Silicon occurrence, uptake, transport and mechanisms of heavy metals, minerals and salinity enhanced tolerance in plants with future prospects: A review

(2016) Muhammad Imtiaz et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Silicon-induced reversibility of cadmium toxicity in rice

(2016) Muhammad Ansar Farooq et al.   JOURNAL OF EXPERIMENTAL BOTANY

Automated image analysis for quantification of reactive oxygen species in plant leaves

(2016) Joanna Sekulska-Nalewajko et al.   METHODS

Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis

(2016) Yi-Shih Chen et al.   PLANT MOLECULAR BIOLOGY

Impact of silicon on Indian mustard (Brassica juncea L.) root traits by regulating growth parameters, cellular antioxidants and stress modulators under arsenic stress

(2016) Chandana Pandey et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Levels of arsenic pollution in daily foodstuffs and soils and its associated human health risk in a town in Jiangsu Province, China

(2015) Yanxue Jiang et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Mechanisms of silicon-mediated alleviation of heavy metal toxicity in plants: A review

(2015) Muhammad Adrees et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Biochemical mechanisms of signaling: Perspectives in plants under arsenic stress

(2015) Ejazul Islam et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

MYB transcription factors, active players in abiotic stress signaling

(2015) Chaonan Li et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Mitigation of cadmium and arsenic in rice grain by applying different silicon fertilizers in contaminated fields

(2015) Hong-Yan Wang et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Effects of selenium and silicon on enhancing antioxidative capacity in ramie (Boehmeria nivea (L.) Gaud.) under cadmium stress

(2015) Hui Tang et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

RNA-Seq Analysis of Rice Roots Reveals the Involvement of Post-Transcriptional Regulation in Response to Cadmium Stress

(2015) Fei He et al.   Frontiers in Plant Science

Genome-Wide Analysis and Heavy Metal-Induced Expression Profiling of the HMA Gene Family in Populus trichocarpa

(2015) Dandan Li et al.   Frontiers in Plant Science

Silicon mitigates heavy metal stress by regulating P-type heavy metal ATPases, Oryza sativa low silicon genes, and endogenous phytohormones

(2014) Yoon-Ha Kim et al.   BMC PLANT BIOLOGY

Arsenate induced differential response in rice genotypes

(2014) Meetu Gupta et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Soil Contamination in China: Current Status and Mitigation Strategies

(2014) Fang-Jie Zhao et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Assessment of cadmium (Cd) concentration in arable soil in China

(2014) Xiuying Zhang et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Foliar application with nano-silicon alleviates Cd toxicity in rice seedlings

(2014) Shihua Wang et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Arsenic accumulation in maize crop (Zea mays): A review

(2014) J.M. Rosas-Castor et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Effects of nanoscale silica sol foliar application on arsenic uptake, distribution and oxidative damage defense in rice (Oryza sativa L.) under arsenic stress

(2014) Chuanping Liu et al.   RSC Advances

Exposure of Brassica juncea (L) to arsenic species in hydroponic medium: comparative analysis in accumulation and biochemical and transcriptional alterations

(2013) Mohd Anwar Ahmad et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Combined NanoSIMS and synchrotron X-ray fluorescence reveal distinct cellular and subcellular distribution patterns of trace elements in rice tissues

(2013) Katie L. Moore et al.   NEW PHYTOLOGIST

Inhibition of cadmium ion uptake in rice (Oryza sativa) cells by a wall-bound form of silicon

(2013) Jian Liu et al.   NEW PHYTOLOGIST

MYB transcription factor genes as regulators for plant responses: an overview

(2013) Supriya Ambawat et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Silicon modifies root anatomy, and uptake and subcellular distribution of cadmium in young maize plants

(2012) Marek Vaculík et al.   ANNALS OF BOTANY

Silicate Mineral Impacts on the Uptake and Storage of Arsenic and Plant Nutrients in Rice (Oryza sativa L.)

(2012) Angelia L. Seyfferth et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Growth and physiological responses of maize (Zea mays L.) to porous silica nanoparticles in soil

(2012) R. Suriyaprabha et al.   JOURNAL OF NANOPARTICLE RESEARCH

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Nramp5 Is a Major Transporter Responsible for Manganese and Cadmium Uptake in Rice

(2012) A. Sasaki et al.   PLANT CELL

A mutant of the Arabidopsis thaliana LIPOXYGENASE1 gene shows altered signalling and oxidative stress related responses after cadmium exposure

(2012) Els Keunen et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Arsenic in cooked rice: Effect of chemical, enzymatic and microbial processes on bioaccessibility and speciation in the human gastrointestinal tract

(2011) Guo-Xin Sun et al.   ENVIRONMENTAL POLLUTION

Silicon Alleviates Drought Stress of Rice Plants by Improving Plant Water Status, Photosynthesis and Mineral Nutrient Absorption

(2010) Wei Chen et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

Structural changes induced in thionins by chloride anions as determined by molecular dynamics simulations

(2010) Svetlana V. Oard et al.   BIOPHYSICAL CHEMISTRY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Mechanisms to cope with arsenic or cadmium excess in plants

(2009) Nathalie Verbruggen et al.   CURRENT OPINION IN PLANT BIOLOGY

Occurrence and Partitioning of Cadmium, Arsenic and Lead in Mine Impacted Paddy Rice: Hunan, China

(2009) Paul N. Williams et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Geographical Variation in Total and Inorganic Arsenic Content of Polished (White) Rice

(2009) Andrew A. Meharg et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Silicon-enhanced resistance to cadmium toxicity in Brassica chinensis L. is attributed to Si-suppressed cadmium uptake and transport and Si-enhanced antioxidant defense capacity

(2009) Alin Song et al.   JOURNAL OF HAZARDOUS MATERIALS

Effect of silicon on antioxidant and stomatal response of two grapevine (Vitis vinifera L.) rootstocks grown in boron toxic, saline and boron toxic-saline soil

(2009) G. Soylemezoglu et al.   SCIENTIA HORTICULTURAE

Risk Assessment of Metals from Consuming Vegetables, Fruits and Rice Grown on Soils Irrigated with Waters of the Ebro River in Catalonia, Spain

(2008) Núria Ferré-Huguet et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

Foliar application of two silica sols reduced cadmium accumulation in rice grains

(2008) Chuanping Liu et al.   JOURNAL OF HAZARDOUS MATERIALS

Long-term effects of exogenous silicon on cadmium translocation and toxicity in rice (Oryza sativa L.)

(2007) Chaochun Zhang et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY