Genetically engineered microbial remediation of soils co-contaminated by heavy metals and polycyclic aromatic hydrocarbons: Advances and ecological risk assessment

Metal and metal(loids) removal efficiency using genetically engineered microbes: Applications and challenges

(2021) Pooja Sharma et al.   JOURNAL OF HAZARDOUS MATERIALS

Current progress and challenges in crop genetic transformation

(2021) Ravi B. Anjanappa et al.   JOURNAL OF PLANT PHYSIOLOGY

Rediverting Electron Flux with an Engineered CRISPR-ddAsCpf1 System to Enhance the Pollutant Degradation Capacity of Shewanella oneidensis

(2020) Jie Li et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

CRISPRi System as an Efficient, Simple Platform for Rapid Identification of Genes Involved in Pollutant Transformation by Aeromonas hydrophila

(2020) Jie Wu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Genetic Engineering-Facilitated Coassembly of Synthetic Bacterial Cells and Magnetic Nanoparticles for Efficient Heavy Metal Removal

(2020) Nali Zhu et al.   ACS Applied Materials & Interfaces

Characterization of nitrate-dependent As(III)-oxidizing communities in arsenic-contaminated soil and investigation of their metabolic potentials by the combination of DNA-SIP and metagenomics

(2020) Miaomiao Zhang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Bacteria in Heavy Metal Remediation and Nanoparticle Biosynthesis

(2020) Siavash Iravani et al.   ACS Sustainable Chemistry & Engineering

Alternative Strategies for Microbial Remediation of Pollutants via Synthetic Biology

(2020) Shweta Jaiswal et al.   Frontiers in Microbiology

Long-Term Effects of Copper Nanopesticides on Soil and Sediment Community Diversity in Two Outdoor Mesocosm Experiments

(2020) Lauren N. Carley et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Introducing Chemistry Students to Emerging Technologies in Gene Editing, Their Applications, and Ethical Considerations

(2020) Jahangir Emrani et al.   JOURNAL OF CHEMICAL EDUCATION

Anammox biofilm system under the stress of Hg(II): Nitrogen removal performance, microbial community dynamic and resistance genes expression

(2020) Zhao Chen et al.   JOURNAL OF HAZARDOUS MATERIALS

Engineering designer beta cells with a CRISPR-Cas9 conjugation platform

(2020) Donghyun Lim et al.   Nature Communications

Bioremediation potential of Cd by transgenic yeast expressing a metallothionein gene from Populus trichocarpa

(2020) Vinicius Henrique De Oliveira et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Metabolic engineering of Cupriavidus necator H16 for improved chemoautotrophic growth and PHB production under oxygen-limiting conditions

(2020) Ruohao Tang et al.   METABOLIC ENGINEERING

Applications of CRISPR in a Microbial Cell Factory: From Genome Reconstruction to Metabolic Network Reprogramming

(2020) Yaokang Wu et al.   ACS Synthetic Biology

Influence of surface functionalities of pyrogenic carbonaceous materials on the generation of reactive species towards organic contaminants: A review

(2020) Cheng Huang et al.   CHEMICAL ENGINEERING JOURNAL

Impact of Redox Conditions on Antibiotic Resistance Conjugative Gene Transfer Frequency and Plasmid Fate in Wastewater Ecosystems

(2020) Mui-Choo Jong et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Bacterial community and PAH-degrading genes in paddy soil and rice grain from PAH-contaminated area

(2020) Chao Lu et al.   APPLIED SOIL ECOLOGY

Metallothionein dependent-detoxification of heavy metals in the agricultural field soil of industrial area: Earthworm as field experimental model system

(2020) Ananthanarayanan Yuvaraj et al.   CHEMOSPHERE

Transcription profiling-guided remodeling of sulfur metabolism in synthetic bacteria for efficiently capturing heavy metals

(2020) Jinpeng Liu et al.   JOURNAL OF HAZARDOUS MATERIALS

A Pseudomonas sp. strain uniquely degrades PAHs and heterocyclic derivatives via lateral dioxygenation pathways

(2020) Yunli Liu et al.   JOURNAL OF HAZARDOUS MATERIALS

A Review on Heavy Metals Contamination in Soil: Effects, Sources, and Remediation Techniques

(2019) Changfeng Li et al.   SOIL & SEDIMENT CONTAMINATION

Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83

(2019) Lucas G. Castellani et al.   PLASMID

A repeat region from the Brassica juncea HMA4 gene BjHMA4R is specifically involved in Cd2+ binding in the cytosol under low heavy metal concentrations

(2019) Jianwu Wang et al.   BMC PLANT BIOLOGY

Low molecular weight organic acids enhance the high molecular weight polycyclic aromatic hydrocarbons degradation by bacteria

(2019) Anithadevi Kenday Sivaram et al.   CHEMOSPHERE

Adsorption behavior of engineered carbons and carbon nanomaterials for metal endocrine disruptors: Experiments and theoretical calculation

(2019) Chen Zhang et al.   CHEMOSPHERE

Evaluation of the microbial diversity and heavy metal resistance genes of a microbial community on contaminated environment

(2019) J.C. Xavier et al.   APPLIED GEOCHEMISTRY

Cloning and functional characterization of a novel metallothionein gene in Antarctic sea-ice yeast (Rhodotorula mucilaginosa )

(2019) Guangfeng Kan et al.   JOURNAL OF BASIC MICROBIOLOGY

Isolation and characterization of a moderate thermophilic Paenibacillus naphthalenovorans strain 4B1 capable of degrading dibenzofuran from dioxin-contaminated soil in Vietnam

(2019) Le Thi Ha Thanh et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Bioremediation of heavy metals by microbial process

(2019) Samakshi Verma et al.   Environmental Technology & Innovation

Engineered cells for selective detection and remediation of Hg2+ based on transcription factor MerR regulated cell surface displayed systems

(2019) Dan Wang et al.   BIOCHEMICAL ENGINEERING JOURNAL

Cupriavidus sp. strain Cd02-mediated pH increase favoring bioprecipitation of Cd2+ in medium and reduction of cadmium bioavailability in paddy soil

(2019) Feng Li et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Tandem oligomeric expression of metallothionein enhance heavy metal tolerance and bioaccumulation in Escherichia coli

(2019) Wenli Ma et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Soil concentrations and soil-air exchange of polycyclic aromatic hydrocarbons in five Asian countries

(2019) Wen-Jun Hong et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Spatial assessment of farmland soil pollution and its potential human health risks in China

(2019) Siyan Zeng et al.   SCIENCE OF THE TOTAL ENVIRONMENT

The Role of Zinc Efflux during Acinetobacter baumannii Infection

(2019) Saleh F. Alquethamy et al.   ACS Infectious Diseases

Yield advantage and cadmium decreasing of rice in intercropping with water spinach under moisture management

(2019) Zhiming Kang et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Absence of the nahG-like gene caused the syntrophic interaction between Marinobacter and other microbes in PAH-degrading process

(2019) Chongyang Wang et al.   JOURNAL OF HAZARDOUS MATERIALS

Co-expression of multiple heavy metal transporters changes the translocation, accumulation, and potential oxidative stress of Cd and Zn in rice (Oryza sativa)

(2019) Siqi Tian et al.   JOURNAL OF HAZARDOUS MATERIALS

Evolution and resistance of a microbial community exposed to Pb(II) wastewater

(2019) Zhaosheng Liu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Antagonistic effects in zebrafish (Danio rerio) behavior and oxidative stress induced by toxic metals and deltamethrin acute exposure

(2019) Roxana Jijie et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Remediation of soil and water contaminated with petroleum hydrocarbon: A review

(2019) Innocent Chukwunonso Ossai et al.   Environmental Technology & Innovation

Synergistic toxicity of microcystin-LR and Cu to zebrafish (Danio rerio)

(2019) Huimin Wei et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Improvement of industrially important microbial strains by genome shuffling: Current status and future prospects

(2018) Tinashe Archbold Magocha et al.   BIORESOURCE TECHNOLOGY

An integrative approach toward biosensing and bioremediation of metals and metalloids

(2018) A. Shukla et al.   International Journal of Environmental Science and Technology

Self-mediated pH changes in culture medium affecting biosorption and biomineralization of Cd 2+ by Bacillus cereus Cd01

(2018) Feng Li et al.   JOURNAL OF HAZARDOUS MATERIALS

Chromosomal expression of CadR on Pseudomonas aeruginosa for the removal of Cd(II) from aqueous solutions

(2018) Xiang Tang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Remediation techniques for heavy metal-contaminated soils: Principles and applicability

(2018) Lianwen Liu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Application of soil amendments to contaminated soils for heavy metal immobilization and improved soil quality—a critical review

(2018) Chaw Su Lwin et al.   SOIL SCIENCE AND PLANT NUTRITION

Review of CRISPR/Cas9 sgRNA Design Tools

(2018) Yingbo Cui et al.   Interdisciplinary Sciences-Computational Life Sciences

Recent advances in conventional and contemporary methods for remediation of heavy metal-contaminated soils

(2018) Swati Sharma et al.   3 Biotech

Recent advances in conventional and contemporary methods for remediation of heavy metal-contaminated soils

(2018) Swati Sharma et al.   3 Biotech

Bioremediation through microbes: systems biology and metabolic engineering approach

(2018) Arun Kumar Dangi et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

pahE, a Functional Marker Gene for Polycyclic Aromatic Hydrocarbon-Degrading Bacteria

(2018) Chengyue Liang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microorganism remediation strategies towards heavy metals

(2018) Kun Yin et al.   CHEMICAL ENGINEERING JOURNAL

Impacts of heavy metals and soil properties at a Nigerian e-waste site on soil microbial community

(2018) Bo Jiang et al.   JOURNAL OF HAZARDOUS MATERIALS

Molecular cloning, expression and characterization of poxa1b gene from Pleurotus ostreatus

(2018) Mahnaz Mohtashami et al.   MOLECULAR BIOLOGY REPORTS

Heavy metal pollution in Antarctica and its potential impacts on algae

(2018) Wan-Loy Chu et al.   Polar Science

Heavy metal contamination and health risk assessment for children near a large Cu-smelter in central China

(2018) Li-Mei Cai et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Improving risk management by using the spatial interaction relationship of heavy metals and PAHs in urban soil

(2018) Shaohua Wu et al.   JOURNAL OF HAZARDOUS MATERIALS

Substrate specificities of aromatic ring-hydroxylating oxygenases of an uncultured gammaproteobacterium from chronically-polluted subantarctic sediments

(2018) Matías A. Musumeci et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Reducing methylmercury accumulation in fish using Escherichia coli with surface-displayed methylmercury-binding peptides

(2018) Minrui Liu et al.   JOURNAL OF HAZARDOUS MATERIALS

Polycyclic Aromatic Hydrocarbons: A Critical Review of Environmental Occurrence and Bioremediation

(2017) Oluwadara Oluwaseun Alegbeleye et al.   ENVIRONMENTAL MANAGEMENT

Methods for genetic transformation of filamentous fungi

(2017) Dandan Li et al.   Microbial Cell Factories

Insights in the regulation of the degradation of PAHs in Novosphingobium sp. HR1a and utilization of this regulatory system as a tool for the detection of PAHs

(2017) Ana Segura et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Development of a highly specific and sensitive cadmium and lead microbial biosensor using synthetic CadC-T7 genetic circuitry

(2016) Hyun Ju Kim et al.   BIOSENSORS & BIOELECTRONICS

Development of mercury (II) ion biosensors based on mercury-specific oligonucleotide probes

(2016) Lanying Li et al.   BIOSENSORS & BIOELECTRONICS

Characterization of the phthalate acid catabolic gene cluster in phthalate acid esters transforming bacterium-Gordonia sp. strain HS-NH1

(2016) Dandan Li et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Plasmid mediated transfer of antibiotic resistance and heavy metal tolerance in thermotolerant water borne coliforms

(2016) Tewari Suman et al.   African Journal of Microbiology Research

Isolation of oxygenase genes for indigo-forming activity from an artificially polluted soil metagenome by functional screening using Pseudomonas putida strains as hosts

(2015) Hirofumi Nagayama et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

“Omics” Insights into PAH Degradation toward Improved Green Remediation Biotechnologies

(2015) Abdelhak El Amrani et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Gene Expression of an Arthrobacter in Surfactant-Enhanced Biodegradation of a Hydrophobic Organic Compound

(2015) Feng Li et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Ionic Liquid Facilitates the Conjugative Transfer of Antibiotic Resistance Genes Mediated by Plasmid RP4

(2015) Qing Wang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Cloning of a copper resistance gene cluster from the cyanobacteriumSynechocystissp. PCC 6803 by recombineering recovery

(2015) John R. Gittins   FEBS LETTERS

Purification and Characterization of Catechol 1,2-Dioxygenase from Acinetobacter sp. Y64 Strain and Escherichia coli Transformants

(2015) J. Lin et al.   PROTEIN JOURNAL

Bacterial Recombineering: Genome Engineering via Phage-Based Homologous Recombination

(2015) Gur Pines et al.   ACS Synthetic Biology

The Confluence of Heavy Metal Biooxidation and Heavy Metal Resistance: Implications for Bioleaching by Extreme Thermoacidophiles

(2015) Garrett Wheaton et al.   Minerals

Volatilization of Arsenic from Polluted Soil by Pseudomonas putida Engineered for Expression of the arsM Arsenic(III) S-Adenosine Methyltransferase Gene

(2014) Jian Chen et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Effect of surfactant on phenanthrene metabolic kinetics by Citrobacter sp. SA01

(2014) Feng Li et al.   JOURNAL OF ENVIRONMENTAL SCIENCES

Enhanced phytoremediation of multi-metal contaminated soils by interspecific fusion between the protoplasts of endophytic Mucor sp. CBRF59 and Fusarium sp. CBRF14

(2014) Zujun Deng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Cloning of Catechol 2,3-Dioxygenase Gene and Construction of a Stable Genetically Engineered Strain for Degrading Crude Oil

(2013) Yun Xie et al.   INDIAN JOURNAL OF MICROBIOLOGY

Specific detection of bioavailable phenanthrene and mercury by bacterium reporters in the red soil

(2013) H. Wei et al.   International Journal of Environmental Science and Technology

Construction of a Green Fluorescent Protein (GFP)-Marked Multifunctional Pesticide-Degrading Bacterium for Simultaneous Degradation of Organophosphates and γ-Hexachlorocyclohexane

(2013) Chao Yang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease

(2013) Seung Woo Cho et al.   NATURE BIOTECHNOLOGY

A fusant of Sphingomonas sp. GY2B and Pseudomonas sp. GP3A with high capacity of degrading phenanthrene

(2013) Jing Lu et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Bacterial heavy metal transporter MerC increases mercury accumulation in Arabidopsis thaliana

(2012) Masako Kiyono et al.   BIOCHEMICAL ENGINEERING JOURNAL

Effect of surfactant-induced cell surface modifications on electron transport system and catechol 1,2-dioxygenase activities and phenanthrene biodegradation by Citrobacter sp. SA01

(2012) Feng Li et al.   BIORESOURCE TECHNOLOGY

Heavy metal accumulation by recombinant mammalian metallothionein within Escherichia coli protects against elevated metal exposure

(2012) Sandrine Sauge-Merle et al.   CHEMOSPHERE

An insight into the origin and functional evolution of bacterial aromatic ring-hydroxylating oxygenases

(2012) Joydeep Chakraborty et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Microbial activity and diversity in long-term mixed contaminated soils with respect to polyaromatic hydrocarbons and heavy metals

(2012) Palanisami Thavamani et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

TALENs: a widely applicable technology for targeted genome editing

(2012) J. Keith Joung et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Construction of a bacterial biosensor for zinc and copper and its application to the development of multifunctional heavy metal adsorption bacteria

(2012) Sambandam Ravikumar et al.   PROCESS BIOCHEMISTRY

Cultivation of unculturable soil bacteria

(2012) Van H.T. Pham et al.   TRENDS IN BIOTECHNOLOGY

Function and Regulation of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) / CRISPR Associated (Cas) Systems

(2012) Corinna Richter et al.   Viruses-Basel

Phn and Nag-like dioxygenases metabolize polycyclic aromatic hydrocarbons in Burkholderia sp. C3

(2011) Panlada Tittabutr et al.   BIODEGRADATION

Genome Engineering With Zinc-Finger Nucleases

(2011) Dana Carroll   GENETICS

Validation of Arsenic Resistance in Bacillus cereus Strain AG27 by Comparative Protein Modeling of arsC Gene Product

(2011) Sourabh Jain et al.   PROTEIN JOURNAL

High-throughput generation, optimization and analysis of genome-scale metabolic models

(2010) Christopher S Henry et al.   NATURE BIOTECHNOLOGY

Genome shuffling: Progress and applications for phenotype improvement

(2009) Jixian Gong et al.   BIOTECHNOLOGY ADVANCES

Coordination Chemistry of Bacterial Metal Transport and Sensing

(2009) Zhen Ma et al.   CHEMICAL REVIEWS

Biodegradation aspects of Polycyclic Aromatic Hydrocarbons (PAHs): A review

(2009) A.K. Haritash et al.   JOURNAL OF HAZARDOUS MATERIALS