A guide to pre‐processing high‐throughput animal tracking data

Is habitat selection in the wild shaped by individual‐level cognitive biases in orientation strategy?

(2021) Christine E. Beardsworth et al.   ECOLOGY LETTERS

Spatial cognitive ability is associated with transitory movement speed but not straightness during the early stages of exploration

(2021) Christine E. Beardsworth et al.   Royal Society Open Science

Efficient movement strategies mitigate the energetic cost of dispersal

(2021) James A. Klarevas‐Irby et al.   ECOLOGY LETTERS

High-Throughput Tracking of Social Networks in Marine Fish Populations

(2021) Eneko Aspillaga et al.   Frontiers in Marine Science

Memory and Conformity, but Not Competition, Explain Spatial Partitioning Between Two Neighboring Fruit Bat Colonies

(2021) Emmanuel Lourie et al.   Frontiers in Ecology and Evolution

Movement ecology and sex are linked to barn owl microbial community composition

(2020) Ammon Corl et al.   MOLECULAR ECOLOGY

Computational Reproducibility in The Wildlife Society's Flagship Journals

(2020) Althea A. Archmiller et al.   JOURNAL OF WILDLIFE MANAGEMENT

Cognitive map–based navigation in wild bats revealed by a new high-throughput tracking system

(2020) Sivan Toledo et al.   SCIENCE

The multilevel society of a small-brained bird

(2019) Danai Papageorgiou et al.   CURRENT BIOLOGY

Navigating through the r packages for movement

(2019) Rocío Joo et al.   JOURNAL OF ANIMAL ECOLOGY

Identifying stationary phases in multivariate time series for highlighting behavioural modes and home range settlements

(2019) Rémi Patin et al.   JOURNAL OF ANIMAL ECOLOGY

Scale-insensitive estimation of speed and distance traveled from animal tracking data

(2019) Michael J. Noonan et al.   Movement Ecology

Revisitation analysis uncovers spatio-temporal patterns in animal movement data

(2018) Chloe Bracis et al.   ECOGRAPHY

The characteristic time-scale of perceived information for decision-making: Departure from thermal columns in soaring birds

(2018) Roi Harel et al.   FUNCTIONAL ECOLOGY

Wildlife biology, big data, and reproducible research

(2018) Keith P. Lewis et al.   WILDLIFE SOCIETY BULLETIN

Ecological metrics and methods for GPS movement data

(2018) Dana Paige Seidel et al.   INTERNATIONAL JOURNAL OF GEOGRAPHICAL INFORMATION SCIENCE

Open science, reproducibility, and transparency in ecology

(2018) Stephen M. Powers et al.   ECOLOGICAL APPLICATIONS

Resource landscapes explain contrasting patterns of aggregation and site fidelity by red knots at two wintering sites

(2018) Thomas Oudman et al.   Movement Ecology

Positioning of aquatic animals based on time-of-arrival and random walk models using YAPS (Yet Another Positioning Solver)

(2017) Henrik Baktoft et al.   Scientific Reports

Estimating utilization distributions from fitted step-selection functions

(2017) Johannes Signer et al.   Ecosphere

Correlated velocity models as a fundamental unit of animal movement: synthesis and applications

(2017) Eliezer Gurarie et al.   Movement Ecology

Exploratory Visual Analysis for Animal Movement Ecology

(2016) A. Slingsby et al.   COMPUTER GRAPHICS FORUM

Habitat selection by a large herbivore at multiple spatial and temporal scales is primarily governed by food resources

(2016) Claudia Dupke et al.   ECOGRAPHY

Understanding spatial distributions: negative density-dependence in prey causes predators to trade-off prey quantity with quality

(2016) Allert I. Bijleveld et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

ctmm: anrpackage for analyzing animal relocation data as a continuous-time stochastic process

(2016) Justin M. Calabrese et al.   Methods in Ecology and Evolution

Integrated step selection analysis: bridging the gap between resource selection and animal movement

(2016) Tal Avgar et al.   Methods in Ecology and Evolution

moveHMM: anRpackage for the statistical modelling of animal movement data using hidden Markov models

(2016) Théo Michelot et al.   Methods in Ecology and Evolution

Ten Simple Rules for Taking Advantage of Git and GitHub

(2016) Yasset Perez-Riverol et al.   PLoS Computational Biology

Adult vultures outperform juveniles in challenging thermal soaring conditions

(2016) Roi Harel et al.   Scientific Reports

Why GPS makes distances bigger than they are

(2015) Peter Ranacher et al.   INTERNATIONAL JOURNAL OF GEOGRAPHICAL INFORMATION SCIENCE

Shared decision-making drives collective movement in wild baboons

(2015) A. Strandburg-Peshkin et al.   SCIENCE

Aquatic animal telemetry: A panoramic window into the underwater world

(2015) N. E. Hussey et al.   SCIENCE

Terrestrial animal tracking as an eye on life and planet

(2015) R. Kays et al.   SCIENCE

Poor methodological detail precludes experimental repeatability and hampers synthesis in ecology

(2015) Neal R. Haddaway et al.   Ecology and Evolution

From Fine-Scale Foraging to Home Ranges: A Semivariance Approach to Identifying Movement Modes across Spatiotemporal Scales

(2014) Chris H. Fleming et al.   AMERICAN NATURALIST

The gliding speed of migrating birds: slow and safe or fast and risky?

(2014) Nir Horvitz et al.   ECOLOGY LETTERS

idTracker: tracking individuals in a group by automatic identification of unmarked animals

(2014) Alfonso Pérez-Escudero et al.   NATURE METHODS

Flexible and practical modeling of animal telemetry data: hidden Markov models and extensions

(2012) Roland Langrock et al.   ECOLOGY

The Movebank data model for animal tracking

(2011) B. Kranstauber et al.   ENVIRONMENTAL MODELLING & SOFTWARE

Screening Global Positioning System Location Data for Errors Using Animal Movement Characteristics

(2011) KARI BJØRNERAAS et al.   JOURNAL OF WILDLIFE MANAGEMENT

Large-scale navigational map in a mammal

(2011) A. Tsoar et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reproducible Research in Computational Science

(2011) R. D. Peng   SCIENCE

Computational solutions to large-scale data management and analysis

(2010) Eric E. Schadt et al.   NATURE REVIEWS GENETICS

GPS Measurement Error Gives Rise to Spurious 180° Turning Angles and Strong Directional Biases in Animal Movement Data

(2009) Amy Hurford   PLoS One

Estimating space-use and habitat preference from wildlife telemetry data

(2008) Geert Aarts et al.   ECOGRAPHY

The concept of animals' trajectories from a data analysis perspective

(2008) Clément Calenge et al.   Ecological Informatics

ANIMAL MOVEMENTS IN HETEROGENEOUS LANDSCAPES: IDENTIFYING PROFITABLE PLACES AND HOMOGENEOUS MOVEMENT BOUTS

(2008) Frédéric Barraquand et al.   ECOLOGY

CONTINUOUS-TIME CORRELATED RANDOM WALK MODEL FOR ANIMAL TELEMETRY DATA

(2008) Devin S. Johnson et al.   ECOLOGY

A framework for generating and analyzing movement paths on ecological landscapes

(2008) W. M. Getz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A movement ecology paradigm for unifying organismal movement research

(2008) R. Nathan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Trends and missing parts in the study of movement ecology

(2008) M. Holyoak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

State–space models of individual animal movement

(2008) T PATTERSON et al.   TRENDS IN ECOLOGY & EVOLUTION